prot_H-elongata_contig57478.13216.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57478.13216.1
Unique Nameprot_H-elongata_contig57478.13216.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
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BLAST of mRNA_H-elongata_contig57478.13216.1 vs. uniprot
Match: A0A6H5KST8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST8_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.440e-33
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0 
Query:   10 AEGIDVAVVCLQECQSQELQRGLLGVLLELREEKPGL----LRRQLLRCVFLWEAAPILLSRKGYATDVRRDCLALSLWLLTEAHASGDEHLLIPANKTHSRQQRASIS 114
            A+G++ AVVCLQECQS +LQRG+LGVLL LR  K GL    LRR+LLR +FLWEAAPILLS+KGY+TDVRRDCLALSLWLL E HA+GDE  L  ++KT  R +R S+S
Sbjct:  369 ADGVNAAVVCLQECQSPDLQRGVLGVLLGLR--KDGLIKDFLRRKLLRSMFLWEAAPILLSKKGYSTDVRRDCLALSLWLLWETHAAGDERSLALSSKTR-RHRRPSVS 474
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57478.13216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KST8_9PHAE1.440e-3367.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57478contigH-elongata_contig57478:1597..2211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57478.13216.1mRNA_H-elongata_contig57478.13216.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57478 1597..2212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57478.13216.1 ID=prot_H-elongata_contig57478.13216.1|Name=mRNA_H-elongata_contig57478.13216.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
FGGVSVIAAAEGIDVAVVCLQECQSQELQRGLLGVLLELREEKPGLLRRQ
LLRCVFLWEAAPILLSRKGYATDVRRDCLALSLWLLTEAHASGDEHLLIP
ANKTHSRQQRASISLATTTETLASPRDGSPARTG
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