mRNA_H-elongata_contig57431.13208.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig57431.13208.1
Unique NamemRNA_H-elongata_contig57431.13208.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: D7FJD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD2_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 1.520e-140
Identity = 243/405 (60.00%), Postives = 296/405 (73.09%), Query Frame = 1
Query:    1 KAEARISTFKPRISRGTESLVRRRPELGAPFEQRRAIMEAKSEERKHRRLAARAEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMASSENXXXXEVVISQRAKERRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDRRRRHVEERAAQCPFEPWTVEGERSKALSRLLECSSVLAGSA 1215
            +AEAR+STF+P ISRGT+SLVR+RP+L APFEQRRAIM+AK +ER+  R  ARA+EE  WFNP TA+RT+ALLRR MP+RLEETVE+RV RMA++++      V++Q+AKE+ ECTF PSLNPVT S+ +AS LDELVNN RGQRVRER  A+VSD  A+ C HKP LLAE ALL          R          +  GC G GG G+                       AA LYGPGN+YRL++REP RM A+LR RER+QEE+  A+R E+E AEM+ CTF P+TN  +LRA+GPVLVRGLGR+LELKDVAQQ++ ERR  EARAFGVRP AVRR+VLGET+++PFSLS  NK GWW +RR RH  ERAAQC F+PWTVE ER +ALSRLL+ SSVL+  +
Sbjct:  574 EAEARMSTFEPSISRGTKSLVRKRPDLQAPFEQRRAIMDAKRKERERLRQEARAKEETGWFNPTTAQRTDALLRRRMPERLEETVEERVKRMAAADDHRRRNFVMTQKAKEKLECTFRPSLNPVTHSMAQASPLDELVNNLRGQRVRERVKAKVSD--AQACSHKPTLLAEAALLHTDAEGAGASR----------DGGGCAGSGGRGA----------------------AAAGLYGPGNRYRLSVREPARMTAELRAREREQEERFNALRQEKEVAEMQRCTFVPQTNSAILRAEGPVLVRGLGRHLELKDVAQQRERERRXXEARAFGVRPRAVRRSVLGETIVEPFSLSSDNK-GWWQERRMRHEAERAAQCTFKPWTVEAERGRALSRLLDWSSVLSSQS 943          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A6H5KJ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ13_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 9.560e-94
Identity = 168/300 (56.00%), Postives = 201/300 (67.00%), Query Frame = 1
Query:  313 ISQRAKERRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDRRRRHVEERAAQCPFEPWTVEGERSKALSRLLECSSVLAGS 1212
            ++Q+AKE+ ECTF PSLNPVT S+ +AS LDELVNNRRGQRVRER  A+VSD  A+ C HKP LLAE ALL             ++  +A  +  GC G G  GS                       AA LYGPGN+YRL++REP RM A+LR RER+QEE                     +TN  +LRA+GPVLVRGLGR+LELKDVAQQ++ ERREREA+AFGVRPGAVRR+VLGET+++PFSLS  NK GWW +RR RH  ERAAQC F+PWTVE ER +ALSRLL+ SSVL G+
Sbjct:    1 MTQKAKEKLECTFRPSLNPVTHSMAQASPLDELVNNRRGQRVRERVKAKVSD--AQACSHKPTLLAEAALLHT----------NAEGGAASQDGGGCAGSGERGS----------------------AAADLYGPGNRYRLSVREPARMTAELRAREREQEE---------------------RTNSAILRAEGPVLVRGLGRHLELKDVAQQRERERREREAQAFGVRPGAVRRSVLGETIVEPFSLSSDNK-GWWQERRMRHEAERAAQCTFKPWTVEAERGRALSRLLDWSSVLRGN 244          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A836CJI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI8_9STRA)

HSP 1 Score: 129 bits (325), Expect = 5.480e-29
Identity = 122/385 (31.69%), Postives = 164/385 (42.60%), Query Frame = 1
Query:   19 STFKPRISRGTESLVRRRPELGAPFEQRRAIMEAKSEERKHRRLAARAEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMA---------------------------SSENXXXXEVVISQRAKERRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDR 1092
            +TF P +S GT+ LVRRR EL APFE+R+A +EA+S +R   RL    E E  WF P TA R++AL+RR MP+R  ET EQR +RMA                            +E    X     ++A+   +  F P +NP++R++                                                XXXXXXXXX                                                  +YG  NKYRL +REP R+A  +R +  ++  ++   + E+E AEM+ CTFAP          GP+LVRGLGR+LEL D A++       R A AF VRPGA RR   G T+++PF LS    R  W  R
Sbjct:  261 NTFTPELSAGTQRLVRRRRELRAPFEERQAALEARSRQRGAARLRCEREREAAWFTPATAPRSDALVRRRMPERARETPEQRCTRMALVEVSAXXXXXXXXXXXXXXXXWGRRMGAEAERRXXXXXXRQAEAASQHAFTPDINPISRALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXHARPDMYGADNKYRLPVREPWRIAQGIRDKAEERAARLATAQAEREVAEMQACTFAPTLPTPPPPTSGPILVRGLGRHLELCDAARRAAAAADARAAAAFAVRPGAQRRGSDGLTLVQPFRLSGAEARVKWAAR 629          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A7S1XLT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLT3_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.700e-19
Identity = 102/354 (28.81%), Postives = 162/354 (45.76%), Query Frame = 1
Query:   25 FKPRISRGTESLVRRRPELGAPFEQRRAIMEAKSEERKHRRLAARAEEEHRWFNPPTARRTEALLRR-HMPQRLEETVEQRVSRMASSENXXXXEVVISQRAKE---RRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLR--AQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGN 1068
            F P+I+RGT+ ++     L  PF +R+A +EAK  +R   R A  AE E+ W++P    +TE +L++   PQ     +E R  R+          +  S+RA +   ++   F P ++PV+R +  ++   E   N RG+R++ R+      R  + C   P L ++              R  + +P+             SG   D   +  V+      ++  R   +L                  A+ R RER           E+E  EMR CTF PKT  R     A  PV+VRGLGR+LEL+++A+++ EE+RERE +A+G    +  R   G T+ KPF LS  +
Sbjct:  257 FAPQIARGTKKIMHNNAVLRLPFRERQAALEAKRRQRAETRAALAAEAENAWYSPHLTSKTEKILQKSRKPQHRARRLESRRDRITRLSVGDAERIAASRRAAQEEAQKGMPFRPKIDPVSRKLAASTNDYEKHANVRGERMKRRSEEVARLRFLEECSFAPRLESDPVA-----------RDMTRMPTV------------SG---DMSHIKTVLD---SSMDYARKQETL------------------AEKRQRER----------AERELREMRECTFKPKTITRKPPKVAPKPVVVRGLGRHLELREMAKRKAEEQRERERKAWGGSTSSGGRNAAGVTIQKPFKLSRND 553          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A7S2W6P4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W6P4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.190e-15
Identity = 100/403 (24.81%), Postives = 167/403 (41.44%), Query Frame = 1
Query:    7 EARISTFKPRISRGTESLVRRRPEL--GAPFEQRRAIMEAKSEERKHRRLAARAEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMASSENXXXXEVVISQRAKERRECTFHPSLNPVTRSVGR------ASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTND--RVLRAQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDRRRRHVEERAAQCPFEPWTVEGERSKALSRLL 1185
            + R   F P++S  ++ +V   P       F QR+ IME + ++R+  R AA  +        P     + +L +  P+RL ET  QR  R+A  +     ++    R     +  F P +N V++ + R       +  D L  N RG+  RE A +++ +   + C  +P                                                          E L  P   AS     +  R + ++  +    +    R++E ++   RLE E  E++ CTF P  N+    L+   PV+V GLGRY+EL+++A++Q EE+REREA+ F     +VR      TV +PF+LSE  +       RR++  E    C F+P T   +  + L+ +L
Sbjct:  426 QERECRFHPKVSSNSKKIVESHPAFKKATDFVQRQEIMENERKDRERERRAAAHDMSGVATFRPKVHNPDRILVQSRPERLAETEAQRYERLAYKDQQRKMKLQNYIRDVYYSQYEFKPKINRVSKEIVRDTHKKGQACYDSLYKNERGKYYREVAQSQIEEEVLRECTFQP----------------------------------------------------------ETLSRPNATAS-----DAIRKSRKQSEQTIRLIEQSRRKKENRLQQQRLENEYEELKECTFTPLVNNDPSSLQRDIPVVVNGLGRYMELRELAKRQVEEQREREAKIFMEDMTSVRPEPY--TVPQPFNLSEAPQ----SSTRRKYTGELPHDCTFQPKTNLSKTRRELNHIL 759          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A5J4YE75_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YE75_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 2.020e-14
Identity = 93/396 (23.48%), Postives = 164/396 (41.41%), Query Frame = 1
Query:   22 TFKPRISRGTESLVRRRPELGAPFEQRRAIMEAKSEERKHRRLAARAEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMASSENXXXXEVVISQRAKERRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVE---PRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDRRRRH----VEERAAQCPFEPWTVEGERSKALSRLLE 1188
            TF P I+  +E L+    ++ A F +R+       +ER  R L A AE++   F+P T      L     P   E  ++ +V R+A+ +         +       + +F P +N  ++ +  AS L EL  N R + + E        R  +    KP L                  ++   P +      P    G   +G ++       V+                  P   + L+ ++P  +   +   +R ++ ++   +   E +E+  CTF P    RV +  GPV+VRGL RY+EL++ A+ ++  +R REA  F + P     T    TV KPF L E   +     +R +     V E   +C F+P T+EG+  + ++++L+
Sbjct:  448 TFTPHINPASEQLLEDSLQVPANFYERQRFFYEMRQERMQR-LQAEAEDKQCTFSPETGTAAHVLAASEQPHARESFLD-KVERLATLDKQKQDACREATAEHYYAQFSFQPKINARSKRIANASPLSELHKNNRARVLHEEQAREAEQRFRRDHTFKPALY-----------------HSHKAPHSGARLALPHSTDGYKENGGQE-------VI------------------PAANFTLHKQDPEHLVRRIDAYKRDRQARIAEAKAAHEYSELLDCTFTPAITRRVPQPTGPVVVRGLERYMELQESAKAKEAAKRSREAEVFILNPQGAPTT---HTVPKPFKLHESTHQAKLQAQRAQLKQSLVAEAMKECTFKPKTIEGQNRELIAKILQ 796          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A6A3RVC9_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RVC9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.900e-14
Identity = 112/420 (26.67%), Postives = 178/420 (42.38%), Query Frame = 1
Query:   25 FKPRISRGTESLVRRRPELGAPFEQRRAIMEAKSEERKHRRLA------ARAEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMASSENXXXXEVVISQRAKERRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAAS-----LYGPGNKYRLNLREPGRMAADLRTRERQQE-EKVCAMRLEQEAAEMRPCTFAP---KTNDRVLRAQG-------------PVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDRRRRHVEERAA-----QCPFEPWTVEGERSKALSRLL 1185
            F P+IS  ++ +V ++PE    F  R+   +++ +E+            AR E   R    P     E +L++  P R  E+ +Q++ R+  ++           R ++  + TF P +NPV++++GR STL+EL +  R  +    A  R   +D +         A    LR         R+ S +                 + + E+A  A     P  +      +S     LY    + R  L         L   ERQ++ +++ A R  QE  E+  CTF P   K   R   A+G             PV+VRGLGR+LEL+++A+QQ  E+++RE + F        R+    TV KPF LSE NK      RRR  V E        +C F+P TV  +  + L  +L
Sbjct:  580 FAPKISETSKRIVEQKPEFKMDFVARQQYFQSRDQEKMEALEEFSDMDYARGE---RLTFTPDIGNAEGVLQQLRPDRCSESNQQKLYRLTYNDQRDAELKKQRLREEQYAQYTFKPEINPVSKALGRPSTLNELSHPVRDIQQDSPASKRSPPQDRRKAGDSS---ASRVALRQYFANK---RFRSRV-----------------ALEMEEASKAECTFQPTLIASKNRNSSVGTNKLYSREPRSRTKLEWQSENLLHLIEAERQKKADEIEAKRNAQELKELEECTFRPNIQKPRRRGTSAKGSPSPPRDSDAEDKPVIVRGLGRFLELRELARQQQAEQKQREQKVFSPNTSYEPRSY---TVPKPFKLSESNKDSI---RRRLKVREEMRAKEREECTFKPRTVSSQSRRVLKNML 967          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A6G0WG84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WG84_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.590e-14
Identity = 94/387 (24.29%), Postives = 166/387 (42.89%), Query Frame = 1
Query:   52 ESLVRRRPELGAPFEQRRAIMEAKSEERKHRRLAAR--AEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMASSENXXXXEVVISQRAKERRECTF--HPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDRRRRHVEERAAQCPFEPWTVEGERSKALSRLLECSSV 1200
            +++V  + E    F +R+ +++A+ E++   +LA    A+ + + F P       A+L+   P+RL E+    + RM   E       +  Q+ KE +   +   P+LNPV++++GR ++LD L      + +R R +  + +++   C  KP L                                                A +  +D                    R  +  P     ++    R +E+K+   R  +E  +++ CTFAP  N  V  ++ PV+VRGLGR+LELK++A++Q+ E+R+REA+AF        R     TV  PF L    +     +RR     E   +C F P T+E    + + RL+E S++
Sbjct:  435 QTIVESKAEFKLDFVKRQEMLQAQMEQKFQAKLALEEHAQAQDKPFRPSIGN-ANAVLQHTRPKRLIESTTAALYRMTYEEPRKRE--MTKQQLKEAQLAKYPHKPALNPVSKALGRPTSLDNLAKKEPKKTIRSRIVKAMEEKEQAECRFKPDL------------------------------------------------ADLAPID--------------------RTPIWNPATCLQEIELARRLREQKLNDERQSREFEQLQACTFAPTINRDVKTSKKPVVVRGLGRFLELKELAKRQENEQRQREAKAFTQTKDYKPRAY---TVPAPFHLISDERANQRRERRIPAASE-VDECTFHPKTLEHANRRLIERLVEHSNL 746          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A2P6V9Q3_9CHLO (Uncharacterized protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V9Q3_9CHLO)

HSP 1 Score: 85.1 bits (209), Expect = 4.800e-14
Identity = 56/143 (39.16%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  787 QQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQGPVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLS-----EGNKRGWWGDRRRRHVEERAAQCPFEPWTVEGERSKALSRLLECSSV 1200
            ++E +   +R E+E+A +R CTFAP  N R + A+GPV+VRGL R LELK +A++Q  E  +R A+ F  RP A +    G TV +PF L+     E              + +RA QCPF P T  G R   L+ LL   S+
Sbjct:  663 EKEARAATVRFEEESARLRECTFAPDINRRRVEAKGPVVVRGLERVLELKQLAERQRVEAEQRAAKVFHQRPKAKQ----GATVPQPFQLAGHALLEAKAADKQASLLHSTLAQRAQQCPFRPQTNYGARRDKLAHLLAQPSL 801          
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Match: A0A067CYE0_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CYE0_SAPPC)

HSP 1 Score: 81.3 bits (199), Expect = 6.530e-13
Identity = 95/396 (23.99%), Postives = 165/396 (41.67%), Query Frame = 1
Query:   22 TFKPRISRGTESLVRRRPELGAPFEQRRAIMEAKSEER-KHRRLAARAEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMASSENXXXXEVVISQRAKERRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERALARVSDRDAKTCPHKPILLAEEALLRXXXXXXXXXRYTSDIPSAWVEPRGCGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREPGRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQG----PVLVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPFSLSEGNKRGWWGDRRRRHVEERAAQ---CPFEPWTVEGERSKALSRLL 1185
            +F P+++  + S+V ++PE    F  R+ +++ + +++ +H+ L             P     E +L+   P+RL E+  Q++ RM  +E     E           + +F P+LN V++++GRA+ + +L  +   + +R R +  +  R    C  +P L   E                +D  + W  P  C                 +V           C +++     + R +L +   +                      E  E++ CTF P  N + + A      PV+VRGL R+LELK  A++Q+EE REREA+ FG        T    T+ +PF LS  +++   G R R   E R  +   C F P T+E +  K +  LL
Sbjct:  220 SFAPQVNERSHSIVDQKPEFKLDFVTRQRVLQDRRDDKLEHQMLLEEKVNAIEKPFQPCIGNAEKVLKHTRPKRLTESTPQQLYRMTYAEPRKKAEQKKRLEEAYYNKFSFQPTLNHVSKALGRATPIQKLAKSDATKPIRSRVIKEMEQRTQAECRFRPALTPLEG--------------DADRATVW-NPAHC----------------TIVD----------CDSNIERARERRRQSLEDKRHLL---------------------EFEELQRCTFQPNINRKPISASEAAARPVVVRGLSRFLELKQRAKRQEEELREREAKVFG-----TSYTPRAYTIPEPFKLSYQDRQRD-GKRGRLEAELRQKEMKECTFAPSTMEVKNRKLIQSLL 547          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57431.13208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJD2_ECTSI1.520e-14060.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ13_9PHAE9.560e-9456.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJI8_9STRA5.480e-2931.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XLT3_9STRA1.700e-1928.81Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2W6P4_9STRA8.190e-1524.81Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A5J4YE75_9CHLO2.020e-1423.48Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A6A3RVC9_9STRA3.900e-1426.67Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A6G0WG84_9STRA4.590e-1424.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2P6V9Q3_9CHLO4.800e-1439.16Uncharacterized protein n=1 Tax=Micractinium condu... [more]
A0A067CYE0_SAPPC6.530e-1323.99Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57431contigH-elongata_contig57431:103..3498 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.2
Seed ortholog evalue8.6e-120
Seed eggNOG ortholog2880.D7FJD2
KEGG koko:K18626
EggNOG OGs2CMDY@1,2S3XU@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-14_005900.1
Exons5
Model size1233
Cds size1233
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57431.13208.1prot_H-elongata_contig57431.13208.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig57431 103..3498 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.0320983-CDS-H-elongata_contig57431:102..2611622930933.0320983-CDS-H-elongata_contig57431:102..261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 103..261 +
1691679630.4287329-CDS-H-elongata_contig57431:102..2611691679630.4287329-CDS-H-elongata_contig57431:102..261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 103..261 +
1622930933.0533457-CDS-H-elongata_contig57431:835..9781622930933.0533457-CDS-H-elongata_contig57431:835..978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 836..978 +
1691679630.4441316-CDS-H-elongata_contig57431:835..9781691679630.4441316-CDS-H-elongata_contig57431:835..978Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 836..978 +
1622930933.0740695-CDS-H-elongata_contig57431:1421..15831622930933.0740695-CDS-H-elongata_contig57431:1421..1583Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 1422..1583 +
1691679630.453174-CDS-H-elongata_contig57431:1421..15831691679630.453174-CDS-H-elongata_contig57431:1421..1583Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 1422..1583 +
1622930933.0892968-CDS-H-elongata_contig57431:2158..24951622930933.0892968-CDS-H-elongata_contig57431:2158..2495Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 2159..2495 +
1691679630.4611578-CDS-H-elongata_contig57431:2158..24951691679630.4611578-CDS-H-elongata_contig57431:2158..2495Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 2159..2495 +
1622930933.1075575-CDS-H-elongata_contig57431:3066..34981622930933.1075575-CDS-H-elongata_contig57431:3066..3498Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 3067..3498 +
1691679630.4688776-CDS-H-elongata_contig57431:3066..34981691679630.4688776-CDS-H-elongata_contig57431:3066..3498Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57431 3067..3498 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig57431.13208.1

>prot_H-elongata_contig57431.13208.1 ID=prot_H-elongata_contig57431.13208.1|Name=mRNA_H-elongata_contig57431.13208.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=411bp
KAEARISTFKPRISRGTESLVRRRPELGAPFEQRRAIMEAKSEERKHRRL
AARAEEEHRWFNPPTARRTEALLRRHMPQRLEETVEQRVSRMASSENNRR
REVVISQRAKERRECTFHPSLNPVTRSVGRASTLDELVNNRRGQRVRERA
LARVSDRDAKTCPHKPILLAEEALLREPPPPRQQQRYTSDIPSAWVEPRG
CGGDGGSGSRDDEDAVAAVVGLDPEGLEPPRCAASLYGPGNKYRLNLREP
GRMAADLRTRERQQEEKVCAMRLEQEAAEMRPCTFAPKTNDRVLRAQGPV
LVRGLGRYLELKDVAQQQDEERREREARAFGVRPGAVRRTVLGETVLKPF
SLSEGNKRGWWGDRRRRHVEERAAQCPFEPWTVEGERSKALSRLLECSSV
LAGSAGCRKD*
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mRNA from alignment at H-elongata_contig57431:103..3498+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig57431.13208.1 ID=mRNA_H-elongata_contig57431.13208.1|Name=mRNA_H-elongata_contig57431.13208.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3396bp|location=Sequence derived from alignment at H-elongata_contig57431:103..3498+ (Himanthalia elongata Himel1 dioecious)
AAGGCGGAAGCCCGCATCAGCACGTTCAAGCCCAGGATAAGCCGGGGCAC AGAGTCGCTCGTGCGAAGGCGACCGGAGCTCGGGGCCCCGTTCGAACAGC GACGGGCGATCATGGAGGCCAAGTCGGAAGAGAGGAAGCACCGCCGTCTC GCCGCACGAGTGAGTCGTTGGGTCTGGCTGGATGCCTTGGCGGCTGTCGT GCGTATCTGTAGTGCCATATTGCACGGTACCGTTCCTGATTGCTGCGAAA CGCCTGCAACGGTGATCCGACCCCCCCCCCTTACCTCTTTTCTTCCTCTC CCTCTTTCTCGTTCTTTTTCGTTCAACTCCCTGCGCGGCACGGTTATATA TTATTTGCCGAGCTACATATACCTTCTGTGCCCATGGTTCCCGCGCTAGA GAGACGTACAAAAGAGAGAGAGAAACTTGGGATTCAGAAATAGAAATAGA GAGGGAGAAAAGAGAGAGACAAAAAGGTAGGAAACAGAGAGGCTCAGCCC ATAAACAGGTAGGAGGAATATTATATGATAAAAAGGCTTGGCGCGACATA TACGCATCTTCGGTTAGCAAAGCCACGTGTCGCAAAAAAACAACGCTTTT GAATTGGAGAACTCTCGTCCTTCGTGTGGGCGCGCGCGCATGCGAGGGGG ACAAGGCTCCCATTTTATTTCTTGTCCTGCTTTCTGCTGCTCATAACGTA TACGGCATACCACCTGGACACGGGACACACAAGGCTGAAGAGGAGCACCG GTGGTTCAATCCGCCCACCGCTCGGCGGACGGAGGCGCTGCTCCGCCGTC ACATGCCGCAACGGCTAGAGGAGACGGTGGAACAAAGGGTGTCAAGAATG GCGAGCTCCGAGAACAATCGTCGACGGTACGGAAGACCATCCGGAAACGG CGAACACGACGACGAGGAAGAGTGACGTTTTTCGGCCGCGTTTGCTTGCG ATAGTTTGGTTTGTGGATCGCGCGACGAACACACGGAAACCTGAAGGGCC CTGCAGCGTTCGTGCTGTGTTCGACGAAGAAAAATCTTGCGCTGTTGCAC CCCACACATGTTTGATGTACTGAAATAGACCTTTTCTGCCAAACTCTCTG GCCTCTTTTTTTGTTGCGGAGGTCGCGAGTATATTTTTTAGATAGTGAAC ACCCCTCCCCCCCACGTTTTTGGCTCGACCTATCGCGGCTTTGAAACAAT ATTTTCCTTTCGCGTGCACACGCGCTAACGGGACGCACTTTTTTTGTTCT ACCAGGCGATTACGTGTCCCTCCCGTCCGTTCGTCCGTCCCTACCTCGCT TGACAACCCCCTGGTGCAGAGAGGTTGTCATCTCGCAGCGGGCCAAGGAG AGGCGCGAGTGCACGTTCCATCCGTCCCTCAATCCGGTGACGCGGTCGGT GGGACGTGCGTCCACGCTTGACGAGCTCGTCAACAACCGTCGCGGTCAGC GGGTAAGGGAACGGGCGCTGGCTAGGGTCAGGTGAGAACTGTGCGATTTA GCTTCCCACCTTTGGCAAAGTAGAAAGGAGCGGTTGGCCATCGGCGATCT ATCGTGTAGGATTTATTTTTTTTCCCCAAGGGCGCATGGCCAGTTCCCTA ATAGCTAAGTCATCTCACACTTGAGTACCTCTTTCCCCCCCCATCTCCAC TCTGTGTGGTCGTTGTTGTCGTATGTCGTCGCACTTACAGTAGTTTTTTT TTGGGGAGGGGGGTGGTTGCGTTTTGCTGATGGTAGTACCGGACGATATA TTCGTTCCGGTGTATTTGTTGATATTTGAAGGTATTGCTTTTACTGTGAA GGGAAGTGTTGCCGGTTACCTCTTCTCGCGAAGTGGAGTTTCCCAGGTTT TGTGTGTTTCTCAGGGTTGATCTAGACAGCATTCCGATCTATCCCCGCGC GAATCTCGAGGTGCCGCAGAAAAGGAGGAGGGGAAGGGGAGAGAAGAACC ACACTTTGGTTCGTTTTTTTTTCTCCGAAAAATCCTTTATTGAATTATCG CCAAAATCCCCTTGAACCACCGTGCACGCGCGTCGCGTCGCGTCCCGTTG AGCCAGCGACAGGGATGCGAAGACGTGTCCTCACAAGCCCATTTTGCTTG CGGAAGAAGCGCTTTTGCGAGAGCCGCCGCCGCCGAGGCAGCAGCAGCGA TACACCAGCGATATACCTTCGGCTTGGGTGGAACCTCGCGGATGCGGCGG CGACGGTGGCAGTGGCAGCAGAGACGATGAAGACGCTGTTGCGGCAGTTG TTGGCCTCGATCCAGAAGGACTGGAGCCGCCGCGATGCGCGGCCTCTCTA TACGGCCCGGGCAACAAGTACCGCCTGAACTTGAGAGAGCCAGGGAGGAT GGCCGCCGATCTTCGCACTCGGGAACGCCAGCAGGAGGAGAAGGTGAGAG ACGGAGGAGGGGTGGGGGAAATAAACAGGTGGAAAAGGGAGAATAATAAA ACCAGGTCGCGTTTTTGATGTACCATCGACAGGAGTAAGGGGGACTACAT CTAGTGTGCCCCCGGTCCTGCTGTGCGCTCGAAGCCGCACCTTCGCCTTG AGTTTTTTCTTTTAATTGGTGTTTCTGTGCTTGAGAAGTCTTGTGATGAC TCGACGGAGAGTCGTGGTGCAAATAACGGCAAAAATGTGCCCGTTGACGT AGCGCGAGAGTCGCCCATTAATTTGTACGTTCTTGCACCTCGATGGCGCA CACGTGGTCGTGCGCCTGCGTTTGAGGGATAAGGTGGTACGCATTATGCG TGATAGCCTTATCTAATAATGTATTTATCGTTCCGCTCACCGCGTCAACC CTGATCACTGCCTTGACTACCCCGCCATTCTATCCACGCCTTTTACACTC CTACGGCGCCCCAATCATCGCAAACCAACCGAGGACGCGCACCTGTCCGC CCCACAATGCGCACGTGCGCGCATGTAACTCTCCCCCCCCCTGCTCCCCA CCACACAAACAAAGGTCTGCGCGATGCGGCTGGAACAAGAGGCGGCGGAG ATGCGACCGTGCACTTTCGCACCGAAGACTAACGACCGCGTTCTTCGCGC CCAGGGACCAGTGCTGGTTCGAGGCCTCGGCAGGTACCTGGAGCTGAAAG ACGTCGCCCAGCAGCAAGATGAGGAGCGCCGCGAGCGCGAGGCGCGGGCC TTCGGGGTTCGACCGGGGGCCGTACGCCGGACAGTGCTTGGAGAGACGGT CCTTAAGCCGTTCTCGCTGAGCGAGGGGAACAAAAGGGGGTGGTGGGGGG ATAGGAGGAGGAGGCACGTGGAGGAGCGCGCGGCGCAATGTCCGTTCGAG CCGTGGACGGTGGAAGGGGAAAGGAGCAAGGCGCTTTCGAGGCTACTAGA ATGTTCGTCGGTGTTGGCGGGTTCGGCGGGGTGCCGCAAAGATTGA
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Coding sequence (CDS) from alignment at H-elongata_contig57431:103..3498+

>mRNA_H-elongata_contig57431.13208.1 ID=mRNA_H-elongata_contig57431.13208.1|Name=mRNA_H-elongata_contig57431.13208.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2466bp|location=Sequence derived from alignment at H-elongata_contig57431:103..3498+ (Himanthalia elongata Himel1 dioecious)
AAGGCGGAAGCCCGCATCAGCACGTTCAAGCCCAGGATAAGCCGGGGCAC
AGAGTCGCTCGTGCGAAGGCGACCGGAGCTCGGGGCCCCGTTCGAACAGC
GACGGGCGATCATGGAGGCCAAGTCGGAAGAGAGGAAGCACCGCCGTCTC
GCCGCACGAAAGGCGGAAGCCCGCATCAGCACGTTCAAGCCCAGGATAAG
CCGGGGCACAGAGTCGCTCGTGCGAAGGCGACCGGAGCTCGGGGCCCCGT
TCGAACAGCGACGGGCGATCATGGAGGCCAAGTCGGAAGAGAGGAAGCAC
CGCCGTCTCGCCGCACGAGCTGAAGAGGAGCACCGGTGGTTCAATCCGCC
CACCGCTCGGCGGACGGAGGCGCTGCTCCGCCGTCACATGCCGCAACGGC
TAGAGGAGACGGTGGAACAAAGGGTGTCAAGAATGGCGAGCTCCGAGAAC
AATCGTCGACGGCTGAAGAGGAGCACCGGTGGTTCAATCCGCCCACCGCT
CGGCGGACGGAGGCGCTGCTCCGCCGTCACATGCCGCAACGGCTAGAGGA
GACGGTGGAACAAAGGGTGTCAAGAATGGCGAGCTCCGAGAACAATCGTC
GACGAGAGGTTGTCATCTCGCAGCGGGCCAAGGAGAGGCGCGAGTGCACG
TTCCATCCGTCCCTCAATCCGGTGACGCGGTCGGTGGGACGTGCGTCCAC
GCTTGACGAGCTCGTCAACAACCGTCGCGGTCAGCGGGTAAGGGAACGGG
CGCTGGCTAGGGTCAGAGAGGTTGTCATCTCGCAGCGGGCCAAGGAGAGG
CGCGAGTGCACGTTCCATCCGTCCCTCAATCCGGTGACGCGGTCGGTGGG
ACGTGCGTCCACGCTTGACGAGCTCGTCAACAACCGTCGCGGTCAGCGGG
TAAGGGAACGGGCGCTGGCTAGGGTCAGCGACAGGGATGCGAAGACGTGT
CCTCACAAGCCCATTTTGCTTGCGGAAGAAGCGCTTTTGCGAGAGCCGCC
GCCGCCGAGGCAGCAGCAGCGATACACCAGCGATATACCTTCGGCTTGGG
TGGAACCTCGCGGATGCGGCGGCGACGGTGGCAGTGGCAGCAGAGACGAT
GAAGACGCTGTTGCGGCAGTTGTTGGCCTCGATCCAGAAGGACTGGAGCC
GCCGCGATGCGCGGCCTCTCTATACGGCCCGGGCAACAAGTACCGCCTGA
ACTTGAGAGAGCCAGGGAGGATGGCCGCCGATCTTCGCACTCGGGAACGC
CAGCAGGAGGAGAAGCGACAGGGATGCGAAGACGTGTCCTCACAAGCCCA
TTTTGCTTGCGGAAGAAGCGCTTTTGCGAGAGCCGCCGCCGCCGAGGCAG
CAGCAGCGATACACCAGCGATATACCTTCGGCTTGGGTGGAACCTCGCGG
ATGCGGCGGCGACGGTGGCAGTGGCAGCAGAGACGATGAAGACGCTGTTG
CGGCAGTTGTTGGCCTCGATCCAGAAGGACTGGAGCCGCCGCGATGCGCG
GCCTCTCTATACGGCCCGGGCAACAAGTACCGCCTGAACTTGAGAGAGCC
AGGGAGGATGGCCGCCGATCTTCGCACTCGGGAACGCCAGCAGGAGGAGA
AGGTCTGCGCGATGCGGCTGGAACAAGAGGCGGCGGAGATGCGACCGTGC
ACTTTCGCACCGAAGACTAACGACCGCGTTCTTCGCGCCCAGGGACCAGT
GCTGGTTCGAGGCCTCGGCAGGTACCTGGAGCTGAAAGACGTCGCCCAGC
AGCAAGATGAGGAGCGCCGCGAGCGCGAGGCGCGGGCCTTCGGGGTTCGA
CCGGGGGCCGTACGCCGGACAGTGCTTGGAGAGACGGTCCTTAAGCCGTT
CTCGCTGAGCGAGGGGAACAAAAGGGGGTGGTGGGGGGATAGGAGGAGGA
GGCACGTGGAGGAGCGCGCGGCGCAATGTCCGTTCGAGCCGTGGACGGTG
GAAGGGGAAAGGAGCAAGGCGCTTTCGAGGCTACTAGAATGTTCGTCGGT
GTTGGCGGGTTCGGCGGGGTGCCGCAAAGATTGAGTCTGCGCGATGCGGC
TGGAACAAGAGGCGGCGGAGATGCGACCGTGCACTTTCGCACCGAAGACT
AACGACCGCGTTCTTCGCGCCCAGGGACCAGTGCTGGTTCGAGGCCTCGG
CAGGTACCTGGAGCTGAAAGACGTCGCCCAGCAGCAAGATGAGGAGCGCC
GCGAGCGCGAGGCGCGGGCCTTCGGGGTTCGACCGGGGGCCGTACGCCGG
ACAGTGCTTGGAGAGACGGTCCTTAAGCCGTTCTCGCTGAGCGAGGGGAA
CAAAAGGGGGTGGTGGGGGGATAGGAGGAGGAGGCACGTGGAGGAGCGCG
CGGCGCAATGTCCGTTCGAGCCGTGGACGGTGGAAGGGGAAAGGAGCAAG
GCGCTTTCGAGGCTACTAGAATGTTCGTCGGTGTTGGCGGGTTCGGCGGG
GTGCCGCAAAGATTGA
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