prot_H-elongata_contig57333.13200.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57333.13200.1
Unique Nameprot_H-elongata_contig57333.13200.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length40
Homology
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: D8LCV8_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV8_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 6.520e-13
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    7 ELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            ELNKNPPEGVSVGLA DDNMF WELLIVGP DT+
Sbjct:   15 ELNKNPPEGVSVGLANDDNMFMWELLIVGPADTL 48          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A067BQS6_SAPPC (UBC core domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BQS6_SAPPC)

HSP 1 Score: 61.2 bits (147), Expect = 1.400e-11
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 LRPPGAELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            LR    EL++NPPEGVSVGL +D+N+F WE+++VGPPDT+
Sbjct:    8 LRRQLTELSRNPPEGVSVGLGDDENIFHWEIMLVGPPDTL 47          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A662Y7G3_9STRA (UBC core domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y7G3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.860e-11
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 LRPPGAELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            LR    E+++NPPEGVSVGL +D+N+F WE+L+VGPPDT+
Sbjct:   12 LRRQFLEMSRNPPEGVSVGLGDDENIFNWEILLVGPPDTL 51          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A836CP86_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP86_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.630e-11
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    7 ELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            ELN+NPPEGVSVGL +D N++ WELLIVGPPDT+
Sbjct:   15 ELNRNPPEGVSVGLVDDSNIYQWELLIVGPPDTL 48          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A2D4BQ33_PYTIN (UBC core domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ33_PYTIN)

HSP 1 Score: 64.3 bits (155), Expect = 6.100e-11
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 LRPPGAELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            LR   AE++KNPPEGVSVGL +D+N+F WE+L+VGPPDT+
Sbjct:  426 LRRGEAEMSKNPPEGVSVGLGDDENIFHWEILLVGPPDTL 465          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A024UPR9_9STRA (UBC core domain-containing protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UPR9_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.540e-10
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 LRPPGAELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            LR    EL++NPPEGVSVGL +D+N+F WE+++VGPPDT+
Sbjct:    8 LRRQFTELSRNPPEGVSVGLGDDENLFNWEIMLVGPPDTL 47          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A067CW50_SAPPC (UBC core domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CW50_SAPPC)

HSP 1 Score: 61.2 bits (147), Expect = 1.540e-10
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 LRPPGAELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            LR    EL++NPPEGVSVGL +D+N+F WE+++VGPPDT+
Sbjct:    8 LRRQLTELSRNPPEGVSVGLGDDENIFHWEIMLVGPPDTL 47          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A7S0XFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFZ8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.570e-10
Identity = 24/34 (70.59%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    7 ELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            +L++NPP+GVSVGL EDDN+F WE++IVGPPDT+
Sbjct:   21 DLSRNPPDGVSVGLREDDNIFHWEVMIVGPPDTL 54          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A8K1CH94_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH94_PYTOL)

HSP 1 Score: 60.8 bits (146), Expect = 2.250e-10
Identity = 23/34 (67.65%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    7 ELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            E++KNPPEGVSVGL +D+N+F WE+L++GPPDT+
Sbjct:   16 EMSKNPPEGVSVGLGDDENIFRWEILLIGPPDTL 49          
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Match: A0A5D6XWX1_9STRA (UBC core domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWX1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 6.370e-10
Identity = 24/40 (60.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 LRPPGAELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV 40
            LR    E+++NPPEGVSVGL +D+N+F WE+++VGPPDT+
Sbjct:   10 LRRQFLEMSRNPPEGVSVGLGDDENIFNWEIMLVGPPDTL 49          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57333.13200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCV8_ECTSI6.520e-1388.24UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A067BQS6_SAPPC1.400e-1162.50UBC core domain-containing protein n=1 Tax=Saprole... [more]
A0A662Y7G3_9STRA3.860e-1162.50UBC core domain-containing protein (Fragment) n=2 ... [more]
A0A836CP86_9STRA5.630e-1176.47Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A2D4BQ33_PYTIN6.100e-1167.50UBC core domain-containing protein n=1 Tax=Pythium... [more]
A0A024UPR9_9STRA1.540e-1062.50UBC core domain-containing protein n=7 Tax=Saprole... [more]
A0A067CW50_SAPPC1.540e-1062.50UBC core domain-containing protein n=3 Tax=Saprole... [more]
A0A7S0XFZ8_9STRA1.570e-1070.59Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A8K1CH94_PYTOL2.250e-1067.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XWX1_9STRA6.370e-1060.00UBC core domain-containing protein n=1 Tax=Pythium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 2..40
e-value: 2.2E-8
score: 35.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 6..40
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 7..40
e-value: 1.5E-4
score: 21.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57333contigH-elongata_contig57333:2812..2931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57333.13200.1mRNA_H-elongata_contig57333.13200.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57333 2812..2931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57333.13200.1 ID=prot_H-elongata_contig57333.13200.1|Name=mRNA_H-elongata_contig57333.13200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bp
LRPPGAELNKNPPEGVSVGLAEDDNMFFWELLIVGPPDTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2