mRNA_H-elongata_contig11691.1320.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: D7FIB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB9_ECTSI) HSP 1 Score: 286 bits (731), Expect = 1.070e-92 Identity = 158/242 (65.29%), Postives = 183/242 (75.62%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIA--DHEDNHSSSNSKQKQV-----HPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAIPPNSS 705
R GERILDVGCGDGVLTAE++ RGC+VVGIDFAPDMVAAA +K VEAYVMDAS+I+A FLL+K++ DH DN SS+ S Q P S REG+ A+ G A FDAVFTNAALHWV+ VIEG +RVLRPGGRFVGEFGGHGN+A+VRVAMHAAL RRG+DPL VDPWYFPTP +R+LLEAAGF+VDD+ L+PRPT+L + MR +L TFT AFL AIP SS
Sbjct: 80 RDGERILDVGCGDGVLTAEIKARGCRVVGIDFAPDMVAAAARKDVEAYVMDASAINAQFLLAKLSAHDHNDNCSSAPSPPSQTTATEGDPAAPSPPPHREGNR-----AEGGEAPVA-FDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLAVDPWYFPTPREYRRLLEAAGFIVDDVWLVPRPTVLPAGTGMRGWLSTFTKAFLNAIPEESS 315
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: UPI00140E37A0 (class I SAM-dependent methyltransferase n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI00140E37A0) HSP 1 Score: 174 bits (441), Expect = 1.380e-50 Identity = 97/230 (42.17%), Postives = 133/230 (57.83%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAI 690
+ G+RILD+GCGDGVLTA+LQ GC+V+G+D +PD++ +A G++A ++D ++ H N E FDAVF+NAALHW+K VIEGV L+PGGRFVGEFGG GN+A + A+H AL+ RG+DP ++PWYFPT + ++ LEA GF ++ I +IPRPT L +D+R +L TF H F AI
Sbjct: 31 KPGDRILDLGCGDGVLTAKLQELGCEVIGVDSSPDLIHSAKSLGLDARLLDGHNL--------------------------HFNGE-------------------------FDAVFSNAALHWIKQPDRVIEGVWWSLKPGGRFVGEFGGDGNVAKIVTALHTALKTRGIDPEPINPWYFPTIKDYQSRLEARGFRINAIDIIPRPTTLP--TDLRGWLATFAHQFTAAI 207
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: A0A1X7PQC3_AZOLI (Ubiquinone/menaquinone biosynthesis C-methylase UbiE n=5 Tax=Azospirillum TaxID=191 RepID=A0A1X7PQC3_AZOLI) HSP 1 Score: 173 bits (439), Expect = 2.760e-50 Identity = 101/230 (43.91%), Postives = 126/230 (54.78%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAI 690
R GERILD+GCG+G LT L GC VVG D +P+ VA+A +G++A V+D ++ PF A FDAVF+NAALHW+ AV+ GV R L+PGGRFVGEFGG GN+ + A+ AAL RRGLD +PWYFPTPE +R+ LEAAGF V I LIPRPT L +DM +L TF +FL +
Sbjct: 34 RPGERILDLGCGEGTLTERLAALGCVVVGADSSPEFVASAKARGLDARVVDGHAL--PFA-------------------------------------------------AEFDAVFSNAALHWMTRPDAVVAGVARALKPGGRFVGEFGGAGNVGRIVTALEAALDRRGLDGRAANPWYFPTPEEYREKLEAAGFAVRSIALIPRPTPLP--TDMAGWLATFAQSFLNRV 210
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: UPI0019F5D48F (Methyltransferase domain-containing protein n=1 Tax=Pseudanabaenaceae cyanobacterium LEGE 13415 TaxID=2777976 RepID=UPI0019F5D48F) HSP 1 Score: 173 bits (438), Expect = 4.630e-50 Identity = 97/228 (42.54%), Postives = 129/228 (56.58%), Query Frame = 1
Query: 7 GERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAI 690
GERILD+GCGDG LT +LQ GC+VVGID +P+ + +A G++ ++D ++ DN FDAVF+NA LHW+K VIEGV R L+PGGRFVGEFGGHGN++ + A+H AL +RG+DP +++PWYFPT E +R LEA GF V +IVL PRPT L +D+R +L TF + F A+
Sbjct: 33 GERILDLGCGDGALTLKLQEFGCEVVGIDSSPNFIQSANLLGLDVRLLDGHHLNF-----------DNE----------------------------------------FDAVFSNAVLHWMKQPDRVIEGVWRSLKPGGRFVGEFGGHGNVSKIVTALHTALNKRGIDPDQINPWYFPTVEEYRSRLEATGFRVSEIVLFPRPTALP--TDIRGWLSTFANPFTSAL 207
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: A0A537QMR1_9PROT (Class I SAM-dependent methyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QMR1_9PROT) HSP 1 Score: 172 bits (436), Expect = 8.490e-50 Identity = 102/230 (44.35%), Postives = 126/230 (54.78%), Query Frame = 1
Query: 4 SGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAIP 693
+GERILD+GCGDGVLT ++ G VV +D APDMVAAA +G++A +M P DS FDAVF+NAALHW++P V+ GVRR LRPGGRFVGE GGH N A++ VA+ A L RRGLD V+PWYFP+ +R LE AGF V DI +IPRPTML + + +L TF AF A+P
Sbjct: 38 AGERILDLGCGDGVLTEKIAAAGATVVAVDAAPDMVAAARARGIDARIM--------------------------------PGQHLTFDSE-------------------FDAVFSNAALHWMRPPEGVLAGVRRALRPGGRFVGEMGGHNNTAAIIVALGAVLARRGLDAHWVNPWYFPSAGAYRSKLEEAGFAVADIRIIPRPTMLP--TSIEAWLETFAGAFFGALP 214
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: UPI000318037B (class I SAM-dependent methyltransferase n=1 Tax=Spirulina subsalsa TaxID=54311 RepID=UPI000318037B) HSP 1 Score: 172 bits (435), Expect = 1.100e-49 Identity = 96/230 (41.74%), Postives = 132/230 (57.39%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAI 690
+ GERILD+GCGDG LT +LQ GC+V+G+D +PD V +A G++A ++D ++ H N E FDAVF+NAALHW+ VIEGV + L+ GGRFVGEFGGHGN+A + A+H AL++RG+DP ++PWYFPT E ++ LEA G V++I LIPRPT+L +D+R +L TF + F+ I
Sbjct: 31 KPGERILDLGCGDGALTVKLQEFGCEVIGVDSSPDFVHSAKSLGLDARLLDGHNL--------------------------HFNSE-------------------------FDAVFSNAALHWMTQPDRVIEGVWQSLKSGGRFVGEFGGHGNVAKIATALHTALKKRGIDPDPINPWYFPTVEEYQFRLEARGVKVNEIALIPRPTLLP--TDIRGWLSTFANPFMAVI 207
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: K9RR76_SYNP3 (Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RR76_SYNP3) HSP 1 Score: 170 bits (431), Expect = 4.400e-49 Identity = 96/232 (41.38%), Postives = 134/232 (57.76%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAIPP 696
++GE+ILD+GCGDGVL A+++ GC VVG+D +P+++ AA G++A ++ +H +F A FDAVF+NAALHW++ VI+GV R L+PGGRFVGEFGGHGNIA+++ A++ AL +RG +P ++PWYFPT E ++ L A GF V+ IVLIPRPT L +DMR +L TF +L I P
Sbjct: 31 KAGEKILDLGCGDGVLGAKIKEFGCDVVGVDSSPNLIHAAQGIGLDARCLNG-------------------------------HHLNFQ--------------------AEFDAVFSNAALHWMQKPDQVIDGVWRALKPGGRFVGEFGGHGNIATIQTALNMALEKRGANPAAINPWYFPTVEEYQDRLAAIGFTVNQIVLIPRPTRLP--TDMRAWLTTFAQPYLSLITP 209
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: A0A0K2SLL5_9FIRM (Trans-aconitate methyltransferase n=1 Tax=Limnochorda pilosa TaxID=1555112 RepID=A0A0K2SLL5_9FIRM) HSP 1 Score: 170 bits (430), Expect = 6.770e-49 Identity = 97/231 (41.99%), Postives = 127/231 (54.98%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAIP 693
R GERILD+GCGDG LT +L GC VVG+D +P+MVAAA +GV+A+VMDA ++ + FDA+F+NAALHW+K VI GV R LRPGGRF GEFGG GN+A+V A+ A+L RG+ VDPWYFP+ E +R LEA F V +++L+PRPT L +D+ +L TF F+ +P
Sbjct: 31 RPGERILDLGCGDGALTVKLHECGCDVVGVDSSPEMVAAARSRGVDAHVMDAQAL---------------------------------------------------RFENAFDAIFSNAALHWMKRPDDVIAGVWRALRPGGRFAGEFGGEGNVATVVAALRASLAARGISADAVDPWYFPSVEEYRARLEARSFQVRELILVPRPTPLP--TDILGWLKTFAQDFIDLVP 208
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: A0A192IM61_9HYPH (Trans-aconitate methyltransferase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IM61_9HYPH) HSP 1 Score: 169 bits (429), Expect = 8.790e-49 Identity = 98/231 (42.42%), Postives = 126/231 (54.55%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSIDAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAIP 693
+SGERILD+GCGDG LT +L GC+VVG+D DM+ A +KG++A+VMD +++ A FDAVF+NAALHW+ + VI GV+R L+PGGRFVGEFGGH N+A+ + AM A L RGLD PWYFPTPE + LL A GF V LIPRPT L +D+ ++ TF AF +A+P
Sbjct: 34 QSGERILDLGCGDGYLTEKLVEMGCEVVGVDAGEDMIRVAREKGLDAHVMDGHALNFE---------------------------------------------------AEFDAVFSNAALHWMLRPAEVIAGVKRALKPGGRFVGEFGGHTNVAACKTAMIAVLNARGLDGASFSPWYFPTPEEYGSLLTAQGFEVHTAELIPRPTPLP--TDVGGWMDTFGEAFFKALP 211
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Match: UPI00047DDDBE (methyltransferase domain-containing protein n=1 Tax=Fodinicurvata fenggangensis TaxID=1121830 RepID=UPI00047DDDBE) HSP 1 Score: 169 bits (428), Expect = 1.280e-48 Identity = 98/235 (41.70%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 1 RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMDASSI--DAPFLLSKIADHEDNHSSSNSKQKQVHPNHESFLDSREGSEECADPADSGHKDTAIFDAVFTNAALHWVKPLSAVIEGVRRVLRPGGRFVGEFGGHGNIASVRVAMHAALRRRGLDPLEVDPWYFPTPETFRQLLEAAGFVVDDIVLIPRPTMLSRDSDMREYLLTFTHAFLRAIPPN 699
R GERILD+GCGDG LT + G +V+G D APDMVAA+ +G++A +MD + DAPF DAVFTNAALHW+ V++GV R L+PGGRFVGEFGGHGN+A++R A+H AL RR DPL + PWYFP+P+ + + LE GF V++I PRPT L S + +L F AFL N
Sbjct: 35 RPGERILDLGCGDGTLTEVIAASGAEVIGSDSAPDMVAASQGRGLDARLMDGHELAFDAPF-----------------------------------------------------DAVFTNAALHWMTQPDRVLDGVTRALKPGGRFVGEFGGHGNVAAIRTALHEALSRRQQDPLALSPWYFPSPDAYARRLENHGFRVEEIYSFPRPTPLP--SHLPAWLEIFAQAFLAPFSEN 214 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11691.1320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11691.1320.1 >prot_H-elongata_contig11691.1320.1 ID=prot_H-elongata_contig11691.1320.1|Name=mRNA_H-elongata_contig11691.1320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp RSGERILDVGCGDGVLTAELQRRGCKVVGIDFAPDMVAAAVKKGVEAYVMback to top mRNA from alignment at H-elongata_contig11691:170..1775- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11691.1320.1 ID=mRNA_H-elongata_contig11691.1320.1|Name=mRNA_H-elongata_contig11691.1320.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1606bp|location=Sequence derived from alignment at H-elongata_contig11691:170..1775- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11691:170..1775- >mRNA_H-elongata_contig11691.1320.1 ID=mRNA_H-elongata_contig11691.1320.1|Name=mRNA_H-elongata_contig11691.1320.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig11691:170..1775- (Himanthalia elongata Himel1 dioecious)back to top |