prot_H-elongata_contig116887.1319.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116887.1319.1
Unique Nameprot_H-elongata_contig116887.1319.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 5.550e-38
Identity = 71/92 (77.17%), Postives = 79/92 (85.87%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRMAGKALLREGQVSSLV 92
            MGLGKTLQALAVACAYREDWP+LVVAPSSL+ NWRNEA KWVPGL KE IQIV+DAK  VRDSA +VIVSYDLATRM  K+LL +GQ   ++
Sbjct:  140 MGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKEAIQIVRDAKMGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVI 231          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: A0A7S0Y6Y9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y6Y9_HEMAN)

HSP 1 Score: 87.0 bits (214), Expect = 3.030e-20
Identity = 37/80 (46.25%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRMAGK 80
            MGLGKT+QA+AVA  +++DWP+LV+APSSLR  WR+E  +W+P L++ ++ +V   KD+V     + ++SYDL  +++ K
Sbjct:    3 MGLGKTIQAIAVARVFKDDWPLLVIAPSSLRLVWRDEILRWLPELSEADLSVVMTGKDKV--GGRITVISYDLCVKLSDK 80          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: A0A7S0M042_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M042_9CRYP)

HSP 1 Score: 86.7 bits (213), Expect = 4.070e-20
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRMAGKALLRE 85
            MGLGKTLQA+AV+  YREDWP+LVVAPS+LR +WR E  +W+P L + ++ +V    D + D   + ++SYDL  R     + R 
Sbjct:   11 MGLGKTLQAIAVSRIYREDWPLLVVAPSALRLSWRQELLRWLPELGEGDVNVVMTGADAL-DGRPVTVISYDLLARRCDAVVARR 94          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: L1JAD3_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAD3_GUITC)

HSP 1 Score: 91.7 bits (226), Expect = 1.360e-19
Identity = 43/80 (53.75%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKE--NIQIVKDAKDRVRDSALMVIVSYDLATRMA 78
            MGLGKTLQALAVA AY+ +WP+L++ PSSLR NW  E S+W+ G+ +E   +Q+V    D ++    + IVSYDLATRM+
Sbjct:   41 MGLGKTLQALAVAAAYKREWPLLIICPSSLRLNWAQECSRWLEGMKEEPLEVQVVMKGSDAIK-GVDVTIVSYDLATRMS 119          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: A0A0S7HZX7_9TELE (SMAL1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7HZX7_9TELE)

HSP 1 Score: 84.7 bits (208), Expect = 3.590e-19
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRM 77
            MGLGKT+QA+ +A  YR +WP+LVV PSS+R  W     +W+P L+ ++I +V  AK+ +R S L+ IVSYDL +RM
Sbjct:    1 MGLGKTVQAICIAAYYRNEWPLLVVTPSSVRFTWAEAFRRWLPSLSPDSINVVVKAKENMR-SGLVNIVSYDLLSRM 76          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: L8GX54_ACACA (Helicase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX54_ACACA)

HSP 1 Score: 90.5 bits (223), Expect = 4.310e-19
Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRMAGKA 81
            MGLGKTLQA+A+A  Y+EDWP+LVVAPSS+R  W +   KW+PGL  + I+++   KD      L+ I+SYDL  R    A
Sbjct:  389 MGLGKTLQAIAIAAYYKEDWPVLVVAPSSVRVQWADNFEKWIPGLRPDQIKVIMKTKDN--PDGLVNIISYDLVVRQTNIA 467          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: A0A3Q3KVP0_9TELE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=5 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3KVP0_9TELE)

HSP 1 Score: 89.4 bits (220), Expect = 1.100e-18
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRM 77
            MGLGKT+QA+ +A  YR DWP+LVVAPSS+R  W     +W+P L+ ++I +V  AKDR++ S L+ I+SYDL +RM
Sbjct:  416 MGLGKTVQAICIAAYYRNDWPLLVVAPSSVRFTWAEAFRRWLPSLSPDSINVVVKAKDRLQ-SGLVNIISYDLLSRM 491          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: UPI001447F33B (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001447F33B)

HSP 1 Score: 89.0 bits (219), Expect = 1.500e-18
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRM 77
            MGLGKT+QA+ +A  YR +WP+LVVAPSS+R  W     +W+P L+ ++I +V  AKD +R SAL+ I+SYDL +RM
Sbjct:  437 MGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLSPDSINVVVKAKDNLR-SALVNIISYDLLSRM 512          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: UPI001BD25B2D (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1 n=2 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD25B2D)

HSP 1 Score: 88.6 bits (218), Expect = 2.050e-18
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRM 77
            MGLGKT+QA+ +A  YR +WP+LVVAPSS+R  W     +W+P L  +NI +V  AKD +R S L+ I+SYDL +RM
Sbjct:  433 MGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLTADNINVVVKAKDSLR-SGLVNIISYDLLSRM 508          
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Match: A7RGQ3_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RGQ3_NEMVE)

HSP 1 Score: 88.2 bits (217), Expect = 2.610e-18
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    1 MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENIQIVKDAKDRVRDSALMVIVSYDLATRMAGK 80
            MGLGKT+QA+ VA  YR++WP+LVVAPSS+R  W+    KW+P L  ++I +V   KD V  + L+ I+SYDL T+  GK
Sbjct:  123 MGLGKTVQAICVASYYRKEWPLLVVAPSSMRLTWKQAFIKWLPSLDPQSINVVLTGKDNVT-AGLINIISYDLLTKFVGK 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116887.1319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK86_ECTSI5.550e-3877.17Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A7S0Y6Y9_HEMAN3.030e-2046.25Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0M042_9CRYP4.070e-2047.06Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
L1JAD3_GUITC1.360e-1953.75Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A0S7HZX7_9TELE3.590e-1950.65SMAL1 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
L8GX54_ACACA4.310e-1950.62Helicase, putative n=1 Tax=Acanthamoeba castellani... [more]
A0A3Q3KVP0_9TELE1.100e-1853.25SWI/SNF-related matrix-associated actin-dependent ... [more]
UPI001447F33B1.500e-1853.25SWI/SNF-related matrix-associated actin-dependent ... [more]
UPI001BD25B2D2.050e-1853.25SWI/SNF-related matrix-associated actin-dependent ... [more]
A7RGQ3_NEMVE2.610e-1851.25Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..92
e-value: 1.6E-14
score: 55.3
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 1..72
e-value: 1.3E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 1..83
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116887contigH-elongata_contig116887:171..840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116887.1319.1mRNA_H-elongata_contig116887.1319.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116887 153..840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116887.1319.1 ID=prot_H-elongata_contig116887.1319.1|Name=mRNA_H-elongata_contig116887.1319.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
MGLGKTLQALAVACAYREDWPILVVAPSSLRANWRNEASKWVPGLAKENI
QIVKDAKDRVRDSALMVIVSYDLATRMAGKALLREGQVSSLVGPLCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase