mRNA_H-elongata_contig5727.13191.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5727.13191.1
Unique NamemRNA_H-elongata_contig5727.13191.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 979 bits (2530), Expect = 0.000e+0
Identity = 569/699 (81.40%), Postives = 593/699 (84.84%), Query Frame = 1 
Query:    1 MALNVPSALSQPPAQGQQGQGNAVSGS-----QAIIASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVH----EGEDAKEKGSEGNSR--GFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDN-NSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMA--GQGMYSMPYWMGAQPGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQ---MPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXX------SPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQ 2025
            MALN P A++Q PAQG                 A IA YHSASLYVGDLSKDV E TLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKA   LYDTFSLFGNILSCKVATD+ GESKGYGYVHYE GVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLP SWDDAKLREEFEKHG +TSCKVQV     +G+++KEK         GFGFVNFEEH+SAVKAIEA N AEMPDGEG TTLYCARAQKKSER RELQSKH+QVKMERMNKFQGVNVYVKNLDEGVT+D MREAF+PYGTITSARVMVDN N+ QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG MPPRG+PMA   QGMY MPYWMGAQPGMPQQPRQ+MMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQ   MPGQPQPRR AGP   XXXXXXXXXXXXXXXXXXXX        GRGNFK+  GVRNQQ PG PNM   XXXXXXX      +P     P P PQ          AP+TNESL+AAALAAAPPEKQKNMIGERLYPLI++GQP LAGKITGMLLEMDNGELLHLLESP++L AKINEALQVLS HQ +
Sbjct:    1 MALNAPPAMTQAPAQGXXXXXXXXXXXXXXXXNAAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKA---LYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQQMPGQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQ-PGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPGPQA---------APATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQE 686
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BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 689 bits (1778), Expect = 6.920e-240
Identity = 413/659 (62.67%), Postives = 469/659 (71.17%), Query Frame = 1 
Query:   91 IASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT--LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPPRGLPMAGQ--GMYSM--PYWMGAQPG-MPQQPRQY---MMPQMM-PRG-PRG---PMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGN-PNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVH 2016
            +  +HSASLYVGDL+ D+TE+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD  CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKA   LYDTFSLFGNILSCKVATD+ G SKGYGYVHYET  SAN AIAKI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G I S K+Q    + A        SRGFGF+NFE+H++A  A+   NG  +  G  V T  L+C RAQK++ERQRELQ+K+E +K+ERMNK+QGVN+YVKNLDE V +  +REAF+  GTITS R+M D  +G SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ R G+ PRG PM     GMY M  PY M  QPG MPQ PR     MMPQMM PRG PRG    M  Y GRG YPMPAYA  G MP Q       G                        QAQ      +GNFK+   VRN    G  P M   XXXXXXX                            ESLTA ALAAA PE QKNMIGERLYPLIH+ QP+LAGKITGMLLEMDNGELLHLLESP++L AKI EALQVL  H
Sbjct:   57 VTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKA---LYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPAS------LSRGFGFINFEDHEAAESAVSEMNGKTV-SGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAM-GAMPVQQXXXXXXG-----------------ASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQA-------------------ESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667
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BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 630 bits (1626), Expect = 1.590e-217
Identity = 382/666 (57.36%), Postives = 446/666 (66.97%), Query Frame = 1 
Query:  100 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGA--EMPDGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRGPRGPM---------------PAYGGRGNYPMPAYATPGQMPGQPQPRR----PAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQP-IPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQA 2022
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +AN AIAKINGMLIAG +V+VGHF +R  R    +WTN YVK +P  W + ++R+EFE  G + S  V        K+ G+E + +GFGFVNFE+ + A KA+EA NG   + PDG  V  LY  RAQK+SER+REL++K EQ+KMER++K+QGVN+YVKNLD+ +TD+ +REAF  +GTITS+R+M D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQR G+  RG+PM    MY       AQP  +P Q RQ ++ PQ MMP                      P Y       MPAY  P Q  GQP+ RR    PAGP                         Q  A   R NFK+   VRNQ +P      +P        PA P QP +P                  E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EA+QVL  HQ+
Sbjct:   25 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVM-------KDAGAE-HHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVE-LYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRDT-AGVSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMGRGIPMGQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGY-------MPAYGMPMQPRGQPRGRRQGPGPAGP-------------------------QAGAPVNRRNFKYTANVRNQPRPEGVAPGAPAPGVMP--PAAPVQPGVPH----------------LEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQS 627
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BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 622 bits (1603), Expect = 2.210e-213
Identity = 392/652 (60.12%), Postives = 453/652 (69.48%), Query Frame = 1 
Query:  100 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQE 2028
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    +WTN YVK +P +WDD  LR+EFE  G I+SC V        K+  SE N RGFGFVNFEE ++A +A E  N   +   +GV   LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+P GTITS R+M D  +G S+GFGFVCF+ PEEATKA+TEM+GK++  KPIYVALAQR+EVRR QLEAQ AQ+  TGM   RG+PM    MY       AQP  MP Q RQ ++ PQ MMPRG  PRGP+P       Y  P    PG   G   P+     XXXXXXXXXXXXX          QA   A   R NFK+    RNQ     P +  P           PQQP   PQ               E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  HQ++E
Sbjct:   71 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVM-------KDASSEQN-RGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRDP-AGNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLPRGPIP-------YRQPG--VPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQ-----PPVQEPV----------PQQPGGIPQM--------------EPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSEE 672
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BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 616 bits (1589), Expect = 2.980e-211
Identity = 403/648 (62.19%), Postives = 458/648 (70.68%), Query Frame = 1 
Query:  100 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQ 2019
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D  NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W DA L +EFE  G + S  V        K+  +   +RGFGFVN+E+ +SA KA++A NG   P GEG+ T +Y  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ +TDD +REAF+  GTITS+RVM D N G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M PQ MMPRG  RGP+P YG R             +P           XXXXXXXXXXXXXXXXXXXXXXX  QG A A R NFK+    RN      P   +P        PA P Q            ++ P P     LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:   75 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVM-------KDNANPEQNRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRDPN-GNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR-------------VPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQG-APANRRNFKYTANARNH-----PARDAPPQGVMP--PAAPVQ------------NAGPEP-----LTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672
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BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: W4FQT6_9STRA (Polyadenylate-binding protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FQT6_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 5.950e-211
Identity = 387/678 (57.08%), Postives = 457/678 (67.40%), Query Frame = 1 
Query:   85 AIIASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMP--DGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQG-MYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMP-----AYGGRGNYPMPAY-----------------ATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQE 2028
            A    +H+ASLYVGD+  +VTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A +AI KINGMLIAG +V VGHF +R+NR   +DWTN Y+K +P +WDDAKLR EFE  G I+SC V        K+  SE N+RGFGFVNFEE ++A +A +  NG  +   D      LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+  GTITSAR+M D  +G S+GFGFVCF+ PEEATKA+T+++GK+L  KPIYVALAQR+EVRR QLEAQ AQ+  +  RGLP+  Q  MY       AQP  +P Q RQ ++ PQ M+PRG  PRGP+P       GG G Y MP Y                   PGQ+         AGP XXXXXXXXXXX                    R NFK+    RNQ          P        PA P            V++  P   T E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  H+ +E
Sbjct:   27 AAAQPFHTASLYVGDIHPEVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEVFVGHFQKRENRPADSDWTNCYIKNIPHNWDDAKLRSEFEPFGVISSCVVM-------KDTTSE-NNRGFGFVNFEEPEAAREATDKLNGKVVATDDNGADIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFTAVGTITSARIMRDP-AGASRGFGFVCFATPEEATKAVTDLSGKLLNGKPIYVALAQRKEVRRAQLEAQHAQQRMVAGRGLPLQHQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMIPRGGIPRGPIPYRQPGVPGGPGGYGMPQYXXXXXXXXXXXXXXXXXGPPGQL---------AGPPXXXXXXXXXXXQNN-----------------RNNFKYTANARNQ----------PSLQEQAPQPAAPA-----------VAAGVP---TLEPLTSAALAAASPSIQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHETEE 642
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BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 612 bits (1579), Expect = 2.410e-210
Identity = 400/648 (61.73%), Postives = 457/648 (70.52%), Query Frame = 1 
Query:  100 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDEN-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQ 2019
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D   G SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W DA L +EFE  G + S  V        K+  +   +RGFGFVN+++ DSA +A++A NG   P G+GV T +Y  +AQK++ER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ ++DD +REAF   GTITS+RVM D N G S+GFGFVCFS PEEA KA+ EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M PQ MMPRG  RGP+P YG R             +PG          XXXXXXXXXXXXXXXXXXXXXXX  QG A A R NFK+    RN      P    P        PA P Q            ++ P P     LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:   34 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKA---LYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVM-------KDNANPDQNRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRDPN-GNSRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR-------------VPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQG-APANRRNFKYTANARNH-----PAREMPPQGVMP--PAAPVQ------------NAGPEP-----LTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631
[Close]
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC)

HSP 1 Score: 602 bits (1552), Expect = 2.000e-206
Identity = 385/651 (59.14%), Postives = 442/651 (67.90%), Query Frame = 1 
Query:  100 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVT-TLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRGPRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQE 2028
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D  +G SKGYGYVHYET  +AN AIAKINGMLIAG +V VGHF +R +R   ADWTN YVK +P +WDDA LR+EFE  G ITSC V        K+  SEGN RGFGFVNF+E +SA KA+EA N   +   +G    LY  +AQK+SER+REL++K E +KMER+NK+QGVN+YVKNLD+ + DD +REAF+  GTITS R+M D  SG S+GFGFVCF+ PEEATKA+T+MNGK++  KPIYVALAQR+EVRR QLEAQ AQ+  +GM   RG+PM    MY       AQP  MP Q RQ ++ PQ MMPRG                                      XXXXXXXXXXXXXXXXXX    Q QG     R NFK+    RNQ +                +PA P  P+                   E LT+AALAAA P  QKNMIGERL+PLI   QP LAGKITGMLLEMDNGELLHLLESPEAL  KI EA+ VL  H A E
Sbjct:   28 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDVSIDNKA---LYDTFSLFGNILSCKVAIDNTSGGSKGYGYVHYETAEAANEAIAKINGMLIAGSEVFVGHFQKRQDRPDLADWTNCYVKNIPHNWDDATLRKEFEVFGSITSCVVM-------KDASSEGN-RGFGFVNFDEPESAQKAVEALNDKVVGQEDGADIALYVGKAQKRSERERELRNKFEALKMERINKYQGVNLYVKNLDDQLNDDELREAFTTCGTITSCRIMKDP-SGNSRGFGFVCFATPEEATKAVTDMNGKLVSGKPIYVALAQRKEVRRAQLEAQHAQQRASGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQSRQGFVYPQQMMPRGGXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXQVPPQMQGQPRNNRNNFKYTANARNQPE---------------VAPAAPAVPV------------------MEPLTSAALAAASPNMQKNMIGERLFPLIEKSQPSLAGKITGMLLEMDNGELLHLLESPEALEGKITEAIAVLEAHMAAE 620
[Close]
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: F0W707_9STRA (Polyadenylate-binding protein n=2 Tax=Albugo TaxID=65356 RepID=F0W707_9STRA)

HSP 1 Score: 604 bits (1557), Expect = 2.180e-206
Identity = 372/664 (56.02%), Postives = 431/664 (64.91%), Query Frame = 1 
Query:   91 IASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR-TG-MPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQ-YMMPQ-MMPRG--PRGP------MPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRG-----NFKFGPGVRN---QQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQ 2019
            +  + +ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHN+ DAERALDTMNFT IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D  G+SKGYGYVHYET  +A  AI KINGMLIAG +V VGHF +R  R    DWTN YVK LP  W DA LR EFE  G + S  V        K+  S  N RGFGFVN+E+ D A  A+E  +G       GV   LY  +AQK++ER+REL+ K +Q+K+ER+NK+QGVN+YVKNLD+ + D+ +REAF+ YGTITSARVM D+ +G S+GFGFVCFS PEEA  A+ EMNGK++  KP+YVA AQR+EVRR QLEAQ AQR TG +  RG+PM    MY  P +      MP Q RQ YM PQ M+PRG  PR P      MP   G   + M  Y  P Q   Q QPRR                           Q  GPAGA  G     NFK+  G RN   ++  GN NM+         +P G    +                   E LT+AALAAA PE QKNMIGERLYPLIH  Q +LAGKITGMLLEMDN ELLHLLESP+AL +KI EA+QVL  HQ
Sbjct:   70 VQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKA---LYDTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVM-------KDPNSATN-RGFGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDS-TGNSRGFGFVCFSTPEEAATAVAEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMPMGQPPMYGAPMFYAQPNQMPMQGRQAYMYPQQMLPRGVHPRVPFGFGGRMPGAPGPAGFSMAGYGMPMQQ--QRQPRR-------------------------GRQVPGPAGAPNGMPNRRNFKYTTGARNHPSREGLGN-NMSGGVMPQGSSTPMGGAPAL-------------------EPLTSAALAAASPEAQKNMIGERLYPLIHRQQNELAGKITGMLLEMDNSELLHLLESPDALDSKIQEAIQVLEAHQ 674
[Close]
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 597 bits (1538), Expect = 4.810e-204
Identity = 378/654 (57.80%), Postives = 443/654 (67.74%), Query Frame = 1 
Query:  100 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKV--ATDE--NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGN-SRGFGFVNFEEHDSAVKAIEAFNGAEM--PDGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGN--PNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQEA 2031
            +HSASLYVGDL+ DV+E  LFEIF+ VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK   CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKA   LYDTFSLFGNILSCKV  A D+  + E +GYGYVHYET  +AN AIAKINGMLIAGK+V+VGHFV+R +RA  +DWTNLY+K +P  W + KL +EF K G +TS K  + + +  +E       + G+GFVN+ +H+SAVKA+EA NG ++  PDGE    +Y  RAQKK+ER+REL++K E +K ER+NK+QGVN+YVKNLD+ +TD+ +RE F+ YGTITSARVM D+N G S+GFGFVC+SAPEEATKA++E NGK++  KP+Y+ALAQRREVRR QLEAQ+A+  G +PPRG+P+   GMY      GA P        Y MP      P   +P    RG   MPA                     XXXXXXXXXXXXXXXXXXX   A GP            G       G   P +           P     P+P                       AALAAA PE+QKNMIGERLYPLI   QP+LAGKITGMLLEMDNGELLHLLESPEAL  KI EAL VL  H AQ A
Sbjct:   12 FHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKA---LYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGEE-REMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDSN-GNSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMY------GAMP-------MYAMP------PGQGIPPQASRGYPMMPAMMX------------------XXXXXXXXXXXXXXXXXXXPAYAMGPLQQXXXXXXXXSGRXXXXXXGGGAPRVGGQQPGQQQVRPGA--MPVPXXXXXXXXXXXX----XXXXXXXAALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQHNAQMA 617
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI0.000e+081.40Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A835YVH9_9STRA6.920e-24062.67Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A2D4BDJ5_PYTIN1.590e-21757.36Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
A0A6G0WN78_9STRA2.210e-21360.12Polyadenylate-binding protein n=2 Tax=Aphanomyces ... [more]
A0A6A3LR95_9STRA2.980e-21162.19Polyadenylate-binding protein n=5 Tax=Phytophthora... [more]
W4FQT6_9STRA5.950e-21157.08Polyadenylate-binding protein n=8 Tax=Aphanomyces ... [more]
M4B4S0_HYAAE2.410e-21061.73Polyadenylate-binding protein n=19 Tax=Peronospora... [more]
A0A067BXY4_SAPPC2.000e-20659.14Polyadenylate-binding protein n=4 Tax=Saprolegniac... [more]
F0W707_9STRA2.180e-20656.02Polyadenylate-binding protein n=2 Tax=Albugo TaxID... [more]
A0A7S2V0G2_9STRA4.810e-20457.80Polyadenylate-binding protein n=2 Tax=Fibrocapsa j... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5727contigH-elongata_contig5727:3019..10050 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score992.3
Seed ortholog evalue1.1e-286
Seed eggNOG ortholog2880.D8LTD5
Preferred namePAB1
KEGG koko:K13126
KEGG Pathwayko03013,ko03015,ko03018,map03013,map03015,map03018
GOsGO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003727,GO:0003729,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005840,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006446,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008428,GO:0009889,GO:0009894,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010608,GO:0015031,GO:0015833,GO:0015931,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031326,GO:0031329,GO:0031503,GO:0032268,GO:0032991,GO:0033036,GO:0034248,GO:0034613,GO:0035770,GO:0036464,GO:0042886,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051641,GO:0051649,GO:0060211,GO:0060255,GO:0061013,GO:0065007,GO:0065009,GO:0070717,GO:0070727,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0097159,GO:0098772,GO:1900151,GO:1901363,GO:1903311,GO:1990841,GO:1990904,GO:2000112
EggNOG free text desc.RNA binding
EggNOG OGsKOG0123@1,KOG0123@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionpoly(A) binding protein
Ec32 orthologEc-02_005930.1
Exons12
Model size2037
Cds size2037
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5727.13191.1prot_H-elongata_contig5727.13191.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5727 3019..10050 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930930.8686101-CDS-H-elongata_contig5727:3018..31431622930930.8686101-CDS-H-elongata_contig5727:3018..3143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 3019..3143 -
1691679629.519103-CDS-H-elongata_contig5727:3018..31431691679629.519103-CDS-H-elongata_contig5727:3018..3143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 3019..3143 -
1622930930.8856602-CDS-H-elongata_contig5727:3409..35751622930930.8856602-CDS-H-elongata_contig5727:3409..3575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 3410..3575 -
1691679629.5313807-CDS-H-elongata_contig5727:3409..35751691679629.5313807-CDS-H-elongata_contig5727:3409..3575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 3410..3575 -
1622930930.90404-CDS-H-elongata_contig5727:3898..40481622930930.90404-CDS-H-elongata_contig5727:3898..4048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 3899..4048 -
1691679629.5408838-CDS-H-elongata_contig5727:3898..40481691679629.5408838-CDS-H-elongata_contig5727:3898..4048Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 3899..4048 -
1622930930.9194798-CDS-H-elongata_contig5727:4213..43301622930930.9194798-CDS-H-elongata_contig5727:4213..4330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 4214..4330 -
1691679629.5505335-CDS-H-elongata_contig5727:4213..43301691679629.5505335-CDS-H-elongata_contig5727:4213..4330Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 4214..4330 -
1622930930.9394338-CDS-H-elongata_contig5727:4559..51741622930930.9394338-CDS-H-elongata_contig5727:4559..5174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 4560..5174 -
1691679629.561172-CDS-H-elongata_contig5727:4559..51741691679629.561172-CDS-H-elongata_contig5727:4559..5174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 4560..5174 -
1622930930.9558527-CDS-H-elongata_contig5727:5858..59911622930930.9558527-CDS-H-elongata_contig5727:5858..5991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 5859..5991 -
1691679629.5720863-CDS-H-elongata_contig5727:5858..59911691679629.5720863-CDS-H-elongata_contig5727:5858..5991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 5859..5991 -
1622930930.9720669-CDS-H-elongata_contig5727:6362..65021622930930.9720669-CDS-H-elongata_contig5727:6362..6502Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 6363..6502 -
1691679629.5814643-CDS-H-elongata_contig5727:6362..65021691679629.5814643-CDS-H-elongata_contig5727:6362..6502Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 6363..6502 -
1622930930.9834275-CDS-H-elongata_contig5727:6728..68931622930930.9834275-CDS-H-elongata_contig5727:6728..6893Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 6729..6893 -
1691679629.5945382-CDS-H-elongata_contig5727:6728..68931691679629.5945382-CDS-H-elongata_contig5727:6728..6893Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 6729..6893 -
1622930930.9983761-CDS-H-elongata_contig5727:7138..72931622930930.9983761-CDS-H-elongata_contig5727:7138..7293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 7139..7293 -
1691679629.6077228-CDS-H-elongata_contig5727:7138..72931691679629.6077228-CDS-H-elongata_contig5727:7138..7293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 7139..7293 -
1622930931.0099905-CDS-H-elongata_contig5727:8544..86381622930931.0099905-CDS-H-elongata_contig5727:8544..8638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 8545..8638 -
1691679629.6166267-CDS-H-elongata_contig5727:8544..86381691679629.6166267-CDS-H-elongata_contig5727:8544..8638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 8545..8638 -
1622930931.0230672-CDS-H-elongata_contig5727:9479..95661622930931.0230672-CDS-H-elongata_contig5727:9479..9566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 9480..9566 -
1691679629.6248474-CDS-H-elongata_contig5727:9479..95661691679629.6248474-CDS-H-elongata_contig5727:9479..9566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 9480..9566 -
1622930931.038041-CDS-H-elongata_contig5727:9960..100501622930931.038041-CDS-H-elongata_contig5727:9960..10050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 9961..10050 -
1691679629.6331246-CDS-H-elongata_contig5727:9960..100501691679629.6331246-CDS-H-elongata_contig5727:9960..10050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5727 9961..10050 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5727.13191.1

>prot_H-elongata_contig5727.13191.1 ID=prot_H-elongata_contig5727.13191.1|Name=mRNA_H-elongata_contig5727.13191.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=679bp
MALNVPSALSQPPAQGQQGQGNAVSGSQAIIASYHSASLYVGDLSKDVTE
TTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNF
TTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSL
FGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHV
GHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVH
EGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTTLY
CARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMRE
AFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLN
KPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQ
PGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQMPGQPQP
RRPAGPRQQRGQPQPQTGRGGPQGRGMPPQAQGPAGAGRGNFKFGPGVRN
QQQPGNPNMTSPPPPQQQQSPAGPQQPIPSPQRSFFVSSSQPAPSTNESL
TAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLH
LLESPEALLAKINEALQVLSVHQAQEAR*
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mRNA from alignment at H-elongata_contig5727:3019..10050-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5727.13191.1 ID=mRNA_H-elongata_contig5727.13191.1|Name=mRNA_H-elongata_contig5727.13191.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7032bp|location=Sequence derived from alignment at H-elongata_contig5727:3019..10050- (Himanthalia elongata Himel1 dioecious)
ATGGCTTTGAACGTGCCTTCGGCTTTATCCCAGCCCCCTGCTCAGGGGCA
ACAAGGACAGGGCAACGCGGTGAGTGGTTCTCAGGCGATTGTGTTGGCCC
CAAGTCGTAACCGCTCGCGGAGTCGGCTTTCTCATTAGGAAGCATATGCC
CGCATCTGCTTGTCAATACATCCGGCCCTCGACCTTTTCTCTAGTAGTGA
ATCTGTGACGAAGCCACACTGCACCGGCCGCACCTACCTCATTGTGCAGC
CTTCTCGTTGTAATCGAGAACTGGAACACTTGCGTGGTCCACGTTTCGCT
CGGAACTAGGCTGCTCGCCAAAACCATGCTCGTACAGCTTTTCCATTTCT
CACTGGGCACGAGGTCTCTTTTCCCTCGTCATCTTAACCCGCGGCCTTCA
AGATACCCGAGTTGAAGCAATCCTGAAAAATCTTCACTCTCAACGTTGCT
TGATTTTTCGTTCTGGACCCTTGTTCCCTCGCAGATTGCCTCGTACCACT
CGGCTTCCCTGTACGTCGGTGACCTCTCCAAAGACGTGACCGAAACCACT
CTTTTCGAAATCTTTAGCCAGGTAAGCCGCTTTTCAAACTTCTTCCAAAA
TTCCACTTGCCCCACAAATATGCCTTGGTGCCTTCTCTACCTCCATGTGA
AGCGATGTTTGCCGGTAAGGGTAGTAGCAGGATGTGCCAAGGTGGTTTAA
GCCTGTCAGAAGTGCCGCAAAGGGTTTGGTTCCCCTTTGTCCCCGAGGGG
AAGGAAAGACATTTGCCCAGATTCGCCTTGGTATTGATGGCCGAAATACA
TTTATCAGGTGAAAAACTTGAAATTTCTTGCACAGCATCGGCCAAGACTA
AAAAAAAAACCACCTTCTGAATTTTACAGTTTTGGCGTAATATTCTTAAA
AACATAAAAACTCATTCAGCCCTCCGAACATCCCCGCCTTCTTAGCAACA
ATCCAAATCTTAACCCAGGAGCTTTTGAGCCATTTTTCTTAAATATATAA
CTTACGTATATATATATAAACTTATTCCTACCCTCCTAAACATCCAAAGC
CATCTTAGCGCCGTGAGATGTGCAGTGCAGTGTAGTGCAAGATACCAAAT
ATCTCCAGATTCGAAATTGTACATTGTACTTCGGTACTAGCGTACCTTTT
ATGTTTTCTCTATTATTGCCGTTAGGCTTCAATCATTTATCATTTACTAT
TTTTGAGTCTCGTCACATGTACAGTATTCCACCAACCAACCATTTAACCA
ATTTTTGGAAATGTTTCCTCTTACTAATATTATATAGTATATCGAAAATA
AAATAGTCTAGGAGGAAAATCAGTGACACCAAATGCGTAATTTGACCGAG
CCCACCATGGGTTACTGTGGACGGGTGGGAAATACTCCTTCCCCCCTCCG
ATGACTTGACAGGTTGGACCGGTTGCGTCTATCCGCGTGTGCCGGGACAC
AGTCACGAGGCGCTCGCTGGGGTATGCGTACGTTAACTTCCACAACGTGG
CCGACGGTAAGCTCGTGTAAACTTGACTTTTCTGTTCGTAATTTGCTTAA
GAGTAGGCATTTATAACCCCGTACCACATGTCGCGCTTTCAGAAAATCGC
TTATTCGGATGTGATAACCTTTGATCCAAGAACCCATATCGTACGCTAAG
AGCGTTTGCTTGCAAGAGCACCCCACCTGGGCGTTTTCCAATCTCATGTA
GTCCGCTTTTGGCAATCTGTCTACTCTAAATTCAACTGCTGTCAAAAGCC
AAGCCTTCGCTGTTTTACTCAAATGTTTTTTTACCGATGGAATCCAACTC
ACGAGCCCAAATTCTCAAGCGCGAACGGGGACAGTAAAAAATTATTTTCC
CTGTTCAGCTGACCACGAGCAGAAGGCAACCAAATCCATTTGATCTTCTG
CTAAATGTGTGACCAACAACAACACCATCATACTCCAACGTTTCTTATCC
AGCTTGTATCATAAAGGCAGATTCATATATATCTCCCCGGTCGGTTAACG
CCTCCTTCTAATTCGATACGATTTTTATCACGATGCAAATTCAGCTCTTC
TAATGTAGACATCCCACTCCTCTTCTTCTGAAGTCTTTTAGAGTGAGACG
CCCCACCGAGTTCTGAGTTATCTACTTTGGTTTTAGAAGAGCAACAAATA
ACAAAGAAAATATTAAACTAGAAAAACGGAACCCACCATCCCAATACCAA
CCCAAGAAACCAGGAACTATAGAGTATTACGTGCCTATCATATCCCCTTA
TCGTGTCATGTTAATAGCCAGTGATTCTTGTCAAAAATCAGCGGTTGAAA
TATTTTTTTTCTTCTTTTTCGGTTTCTGCTACAAAAAACAAAATAAACAT
CCCGGTTCTGTATGGTTTGAAGCCATGGCTTACTACCGTGGTTACCACTA
AACCATTATGGCGACGAGCATTTTTGAGAACCATTAACGGTTCCCCTTCT
GCCACAGTAATTTTGGCGTATTCAGGGAGAGGAGAGGAGGTGGCATCGGG
CAAAGCGACGGTGGGGATCCCAGAAACAAATGTTAACCGCGTACGCGATT
TCTGTTGTACTGAGGGCACACCACCTCTTTCTTTTAACCTTGCGTCGAAT
GCCTCTGGCTCCGAGCAAACTCCAAGAAGCGGTAGCATGAAGCCTTCAGC
ACGTGCTTACAAACGTACGAGCTGAGTCACTTCACTTAGTGTCAAGCTCC
TGATTTTTGTCCGTTTATTTTTTCTGCCCTTTTTTTCTACTAATTTCTCG
TGCGCAGCCGAACGCGCCCTAGACACGATGAACTTTACGACCATCAAGGA
CCAGGCCTGTCGCATCATGTGGTCTCAGCGCGACCCTTCCCTTCGCCGGT
CGGGCGTGGGCAACATCTTCGTTAAAAACCTCGACGAAACAGTCGACAAC
AAGGCAAGCACAGTCTAGCAGGCGTCTTTGATACTTGTGAAACTCCTGTT
GTGTCGAGTCGGTCACAGTTTAAAACTTCTAATCAGGTTCGCCTTTTATT
TCTCGCTTCGAGGAAGGGGAACCTTTTCCCCAGCGGGCCAATTGATTTAC
AAAAAAATCCTAAGAACTCCTTTTCAGCCTATACGATATATACCCTCCAT
CTCTTATTCTTTTTCGTCTCTCTTTTCTTTACTCGATCGTTTGTGACCGC
CCCACAGGCCCTCTACGACACGTTTTCCCTATTCGGGAATATTCTTTCAT
GCAAGGTGGCGACAGACGAAAACGGCGAGAGCAAGGGCTACGGTTATGTC
CACTACGAGACGGGCGTGTCGGCCAACATGGCCATCGCAAAGATCAACGG
CATGCTCATCGCCGGAAAGCAGGTTCAGTAACGTTCCGAGGTCGGGCGGA
AATCACGCGCATCCGTTACCGAAAGAGAGTTTCTCGTCGTTCATCGTCTT
CAGAATTTCTCCGCGTAATCGGTTGTCAAGAGCGATCAGTCATCGCGCAT
GCGGATCCTTCTTCGTCAGACTCCCCGAACTGCCCAATCGTTTTACCCTA
CTTTAACACAAAAAGTCCACATGTATTTTTTTTCTTCCGTTTTTCCAGGT
TCATGTAGGCCACTTTGTGCGCCGGGACAATCGTGCCGGGCAGGCAGACT
GGACGAACCTGTACGTCAAGGGTCTGCCAGGGTCTTGGGACGACGCTAAG
CTTCGTGAGGAATTCGAGAAGCACGGTCCTATCACCAGGTAGGCAAGGGC
AGAGTTTGTGAAGTGCTGCAGCGGTTTCATGCTGAGTTTTTTTTTTAACC
TTGAACTGGGCTTTGTCTCAGTATATGTGTTGTTATTTTTGTCCATGGGG
GCATGAGATATTGACACTAATTTAGTGCGAAGGACCATGCAACCACAACC
GTTGATTTCGCAACGAAGGTTTATGTCTTCATGCGGTAGCAGCCCAAATA
TATCAGATTCGAATATATATGTATATATTAGTACATTTGTTGAACCTTCC
CTCGACGAATGACCATGATGCGTTTACCGATGCCGACGACCCGCCGCCTC
GATTGCAATGCTCGCGTCGTGCTTTCGGATCATTTTATCTCCCGTGGGGA
ATGGTATAGCTGCAAGGTTCAGGTACACGAAGGCGAGGATGCTAAGGAAA
AGGGTAGCGAAGGCAATAGCCGCGGCTTCGGTTTTGTCAACTTTGAAGAG
CATGATTCTGCTGTCAAGGCCATCGAGGCCTTTAATGGCGCGGTGAGCAC
TCCCCGTAGTTTCGCCTACTCGTTGCCTTTTCGAAGTTTTACTGTCTCCT
TTGTAAAGAAAGCTTGAGCGGGTTATGCTTGGACAACACTAGCTCCCGTT
AGTTTCTTGTTTGTCGGCGTTTGGCCATGTACTAGCTGGTTCACCTTTTT
CACATCGAAGTACCGACTTGGTGCTTTAATCACAACGCACCCAACCGGTC
CCCATTGGAGATGAGCCGCCATCTGACCCCAGGGCTCGTCCCCAAGTGCG
ACACGGGACATGAATATCGCTGAATTTCTTGGCCAGGGCCTGTACAACGC
ATCATATAATATGGTAGTGCCCTCTGACACCGGCGAAACATGCAGTCAAT
ATATAAAACTGCCTTCTAGCAATTACCCCCCAAACCCTACTTGTGTATGC
ATCCTTACAGTTGAGCGCATTAGCGGTGGTAACCGAATTTTTTACCATTA
GTGACGTCGTTGTCCGGCGTCCGCCTAAAAATGCGCAATGACAGTTACTC
AAAAGAAGTGCATAGTTAAAATGACCCCTCGGATTTCCGTCTGTCCGAAA
GCTGCGATGTCTCGGGTTTCCGGCGCCTTCGTGGTTCTCCTGACTACCTC
CTTCTAAGTACTTCCTAACCAACGTTTCATGTGTTGTATTTCTTGCGGAT
CACGTGTTGGTGTCGGCTTACCCCAGGAGATGCCTGACGGCGAGGGCGTT
ACTACGCTATACTGCGCCCGCGCTCAGAAGAAGAGCGAACGCCAGCGCGA
GCTTCAATCGAAACACGAGCAGGTGAAGATGGAGCGAATGAATAAGTTTC
AGGGCGTGAACGTGTACGTGAAGAACCTAGATGAGGGCGTGACGGACGAC
ACCATGCGAGAGGCGTTTTCTCCGTACGGCACCATCACGAGCGCCCGGGT
GATGGTCGACAACAACTCAGGCCAGAGCAAGGGCTTCGGGTTTGTTTGCT
TCTCTGCCCCCGAAGAAGCCACCAAGGCCATAACGGAGATGAACGGGAAA
ATGCTCCTCAACAAGCCCATTTATGTTGCTCTTGCTCAGCGCCGGGAGGT
GCGCCGTACGCAACTAGAGGCGCAGTTTGCCCAGCGTACAGGCATGCCCC
CTCGCGGCCTTCCCATGGCCGGCCAGGGCATGTACAGCATGCCATACTGG
ATGGGCGCGCAGCCCGGCATGCCGCAGCAGCCCAGGCAGTATATGATGCC
GCAGATGATGCCCCGAGGACCTCGTGGTCCTATGCCTGCCTACGGTGGAC
GCGGGAACTACCCGATGCCCGCCTACGCCACCCCTGGCCAGGTAAGTTAT
ATTTGGGGGGTGGTACGGGGTACAATATCCCGGTATATTGTTTTTTGTTT
ATTTTTTGGGGTACATAATTAGGTCGGTCTTAAATAGTTTTGCAAGCATC
TTACCGTTGTCGACTTGCGATAAGGAAAGCTATCACTTGCGCGAGACGAG
TGCAAGTTGAAATACTCTAGTGTCCCCTCGCCGTCTTTATGGGTGTGTTT
TTTCTCATTCTTGTTATCAGATGCCCGGTCAGCCCCAGCCCCGGCGCCCT
GCCGGTCCCCGCCAGCAGCGCGGGCAGCCTCAACCGCAGACTGGGCGTGG
TGGACCCCAGGGTAGGGGTATGCCCCCACAAGCTCAGGTCAGGATGGGGG
ATTTGTTAAAGCCGCATGGATATCTTTCTGATTCAGGTATTGGAATTCTA
TCAACGAATCAGGAGTTCTCAAGATGAGCGCATGTGGCTACTGGTAATTA
TGTAATAGTGAATTTTTTTCTTAACTTTGCGTGTCATGCGTCCTCTGACC
AGGGCCCTGCCGGAGCTGGCCGCGGAAACTTCAAGTTCGGGCCAGGAGTT
CGTAACCAGCAGCAGCCTGGTAACCCGAACATGACTTCACCGCCGCCGCC
GCAGCAGCAGCAATCTCCTGCCGGTCCCCAGCAGCCAATCCCAAGCCCAC
AGGTATATATTTTTTAATATAATGACGTTTGCACACTTCACAAACGTTTT
TGTGATGGTATCGCATCTGCAACAAGCTTCTACGATCAAGATAACGCCGT
ACGAACCGCTGTGTTTTTGACGTGATATCGGTAGAAGTTGGATTTCGAAA
GCCAAACGCCTCAACCCACGACGAAATCATATATGTAGTGCTTTTTACCT
ACAGTATGCGCAAAATCGCAAACAATACAAGCGTTTTTCACACCACCGAT
TTTTGGTGGAATGGTAAAGTAACTTGCATATTAATAATACCTTGCGGTGT
CAAGCTGTTTTGTGTCGAAGCTCAGCGATCTTTTTTCGTCTCCTCATCGC
AGCCGGCGCCTTCAACTAACGAGTCGTTGACGGCCGCAGCCCTCGCCGCG
GCGCCCCCGGAGAAACAGAAGAACATGATTGGAGAGCGCCTCTACCCGCT
AATCCATGACGGACAGCCGCAGCTCGCGGGCAAGATCACCGGTGAGGAAG
CCCTTCTGGTTGGTTTATCCGTGCACGGTACATACTAGAATGAGGTGGTC
TCGATAGCCTTTTAGTGTGACGGCAAGACAAGACAAGACAGGGCGACTAA
TGTTATGATTGATTCCACATTAATTTTTCTTGTGTGAACTATCGTCAGGA
GCTTTGCCATTTATCTTCTCGATTGTGTGTGGCATGATTTAATTATTTTA
AAAATAACTCTTGGCAAGGAACGCTGTCATCACCGCCCTTGCCCGTCCCC
ACCTCAGGTATGCTCCTCGAGATGGACAATGGCGAACTCCTCCACCTCCT
GGAGTCACCGGAGGCCCTGCTAGCTAAAATCAACGAGGCTCTGCAGGTTC
TGAGCGTACACCAAGCCCAGGAAGCCCGCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig5727:3019..10050-

>mRNA_H-elongata_contig5727.13191.1 ID=mRNA_H-elongata_contig5727.13191.1|Name=mRNA_H-elongata_contig5727.13191.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4074bp|location=Sequence derived from alignment at H-elongata_contig5727:3019..10050- (Himanthalia elongata Himel1 dioecious)
ATGGCTTTGAACGTGCCTTCGGCTTTATCCCAGCCCCCTGCTCAGGGGCA
ACAAGGACAGGGCAACGCGGTGAGTGGTTCTCAGGCGATTATGGCTTTGA
ACGTGCCTTCGGCTTTATCCCAGCCCCCTGCTCAGGGGCAACAAGGACAG
GGCAACGCGGTGAGTGGTTCTCAGGCGATTATTGCCTCGTACCACTCGGC
TTCCCTGTACGTCGGTGACCTCTCCAAAGACGTGACCGAAACCACTCTTT
TCGAAATCTTTAGCCAGATTGCCTCGTACCACTCGGCTTCCCTGTACGTC
GGTGACCTCTCCAAAGACGTGACCGAAACCACTCTTTTCGAAATCTTTAG
CCAGGTTGGACCGGTTGCGTCTATCCGCGTGTGCCGGGACACAGTCACGA
GGCGCTCGCTGGGGTATGCGTACGTTAACTTCCACAACGTGGCCGACGGT
TGGACCGGTTGCGTCTATCCGCGTGTGCCGGGACACAGTCACGAGGCGCT
CGCTGGGGTATGCGTACGTTAACTTCCACAACGTGGCCGACGCCGAACGC
GCCCTAGACACGATGAACTTTACGACCATCAAGGACCAGGCCTGTCGCAT
CATGTGGTCTCAGCGCGACCCTTCCCTTCGCCGGTCGGGCGTGGGCAACA
TCTTCGTTAAAAACCTCGACGAAACAGTCGACAACAAGGCAAGCACACCG
AACGCGCCCTAGACACGATGAACTTTACGACCATCAAGGACCAGGCCTGT
CGCATCATGTGGTCTCAGCGCGACCCTTCCCTTCGCCGGTCGGGCGTGGG
CAACATCTTCGTTAAAAACCTCGACGAAACAGTCGACAACAAGGCAAGCA
CAGCCCTCTACGACACGTTTTCCCTATTCGGGAATATTCTTTCATGCAAG
GTGGCGACAGACGAAAACGGCGAGAGCAAGGGCTACGGTTATGTCCACTA
CGAGACGGGCGTGTCGGCCAACATGGCCATCGCAAAGATCAACGGCATGC
TCATCGCCGGAAAGCAGGCCCTCTACGACACGTTTTCCCTATTCGGGAAT
ATTCTTTCATGCAAGGTGGCGACAGACGAAAACGGCGAGAGCAAGGGCTA
CGGTTATGTCCACTACGAGACGGGCGTGTCGGCCAACATGGCCATCGCAA
AGATCAACGGCATGCTCATCGCCGGAAAGCAGGTTCATGTAGGCCACTTT
GTGCGCCGGGACAATCGTGCCGGGCAGGCAGACTGGACGAACCTGTACGT
CAAGGGTCTGCCAGGGTCTTGGGACGACGCTAAGCTTCGTGAGGAATTCG
AGAAGCACGGTCCTATCACCAGGTTCATGTAGGCCACTTTGTGCGCCGGG
ACAATCGTGCCGGGCAGGCAGACTGGACGAACCTGTACGTCAAGGGTCTG
CCAGGGTCTTGGGACGACGCTAAGCTTCGTGAGGAATTCGAGAAGCACGG
TCCTATCACCAGCTGCAAGGTTCAGGTACACGAAGGCGAGGATGCTAAGG
AAAAGGGTAGCGAAGGCAATAGCCGCGGCTTCGGTTTTGTCAACTTTGAA
GAGCATGATTCTGCTGTCAAGGCCATCGAGGCCTTTAATGGCGCGCTGCA
AGGTTCAGGTACACGAAGGCGAGGATGCTAAGGAAAAGGGTAGCGAAGGC
AATAGCCGCGGCTTCGGTTTTGTCAACTTTGAAGAGCATGATTCTGCTGT
CAAGGCCATCGAGGCCTTTAATGGCGCGGAGATGCCTGACGGCGAGGGCG
TTACTACGCTATACTGCGCCCGCGCTCAGAAGAAGAGCGAACGCCAGCGC
GAGCTTCAATCGAAACACGAGCAGGTGAAGATGGAGCGAATGAATAAGTT
TCAGGGCGTGAACGTGTACGTGAAGAACCTAGATGAGGGCGTGACGGACG
ACACCATGCGAGAGGCGTTTTCTCCGTACGGCACCATCACGAGCGCCCGG
GTGATGGTCGACAACAACTCAGGCCAGAGCAAGGGCTTCGGGTTTGTTTG
CTTCTCTGCCCCCGAAGAAGCCACCAAGGCCATAACGGAGATGAACGGGA
AAATGCTCCTCAACAAGCCCATTTATGTTGCTCTTGCTCAGCGCCGGGAG
GTGCGCCGTACGCAACTAGAGGCGCAGTTTGCCCAGCGTACAGGCATGCC
CCCTCGCGGCCTTCCCATGGCCGGCCAGGGCATGTACAGCATGCCATACT
GGATGGGCGCGCAGCCCGGCATGCCGCAGCAGCCCAGGCAGTATATGATG
CCGCAGATGATGCCCCGAGGACCTCGTGGTCCTATGCCTGCCTACGGTGG
ACGCGGGAACTACCCGATGCCCGCCTACGCCACCCCTGGCCAGGAGATGC
CTGACGGCGAGGGCGTTACTACGCTATACTGCGCCCGCGCTCAGAAGAAG
AGCGAACGCCAGCGCGAGCTTCAATCGAAACACGAGCAGGTGAAGATGGA
GCGAATGAATAAGTTTCAGGGCGTGAACGTGTACGTGAAGAACCTAGATG
AGGGCGTGACGGACGACACCATGCGAGAGGCGTTTTCTCCGTACGGCACC
ATCACGAGCGCCCGGGTGATGGTCGACAACAACTCAGGCCAGAGCAAGGG
CTTCGGGTTTGTTTGCTTCTCTGCCCCCGAAGAAGCCACCAAGGCCATAA
CGGAGATGAACGGGAAAATGCTCCTCAACAAGCCCATTTATGTTGCTCTT
GCTCAGCGCCGGGAGGTGCGCCGTACGCAACTAGAGGCGCAGTTTGCCCA
GCGTACAGGCATGCCCCCTCGCGGCCTTCCCATGGCCGGCCAGGGCATGT
ACAGCATGCCATACTGGATGGGCGCGCAGCCCGGCATGCCGCAGCAGCCC
AGGCAGTATATGATGCCGCAGATGATGCCCCGAGGACCTCGTGGTCCTAT
GCCTGCCTACGGTGGACGCGGGAACTACCCGATGCCCGCCTACGCCACCC
CTGGCCAGATGCCCGGTCAGCCCCAGCCCCGGCGCCCTGCCGGTCCCCGC
CAGCAGCGCGGGCAGCCTCAACCGCAGACTGGGCGTGGTGGACCCCAGGG
TAGGGGTATGCCCCCACAAGCTCAGATGCCCGGTCAGCCCCAGCCCCGGC
GCCCTGCCGGTCCCCGCCAGCAGCGCGGGCAGCCTCAACCGCAGACTGGG
CGTGGTGGACCCCAGGGTAGGGGTATGCCCCCACAAGCTCAGGGCCCTGC
CGGAGCTGGCCGCGGAAACTTCAAGTTCGGGCCAGGAGTTCGTAACCAGC
AGCAGCCTGGTAACCCGAACATGACTTCACCGCCGCCGCCGCAGCAGCAG
CAATCTCCTGCCGGTCCCCAGCAGCCAATCCCAAGCCCACAGGGCCCTGC
CGGAGCTGGCCGCGGAAACTTCAAGTTCGGGCCAGGAGTTCGTAACCAGC
AGCAGCCTGGTAACCCGAACATGACTTCACCGCCGCCGCCGCAGCAGCAG
CAATCTCCTGCCGGTCCCCAGCAGCCAATCCCAAGCCCACAGCGATCTTT
TTTCGTCTCCTCATCGCAGCCGGCGCCTTCAACTAACGAGTCGTTGACGG
CCGCAGCCCTCGCCGCGGCGCCCCCGGAGAAACAGAAGAACATGATTGGA
GAGCGCCTCTACCCGCTAATCCATGACGGACAGCCGCAGCTCGCGGGCAA
GATCACCGCGATCTTTTTTCGTCTCCTCATCGCAGCCGGCGCCTTCAACT
AACGAGTCGTTGACGGCCGCAGCCCTCGCCGCGGCGCCCCCGGAGAAACA
GAAGAACATGATTGGAGAGCGCCTCTACCCGCTAATCCATGACGGACAGC
CGCAGCTCGCGGGCAAGATCACCGGTATGCTCCTCGAGATGGACAATGGC
GAACTCCTCCACCTCCTGGAGTCACCGGAGGCCCTGCTAGCTAAAATCAA
CGAGGCTCTGCAGGTTCTGAGCGTACACCAAGCCCAGGAAGCCCGCTGAG
TATGCTCCTCGAGATGGACAATGGCGAACTCCTCCACCTCCTGGAGTCAC
CGGAGGCCCTGCTAGCTAAAATCAACGAGGCTCTGCAGGTTCTGAGCGTA
CACCAAGCCCAGGAAGCCCGCTGA
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