mRNA_H-elongata_contig57214.13181.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH) HSP 1 Score: 216 bits (550), Expect = 3.010e-61 Identity = 121/329 (36.78%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 46 VWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVTKTSIIPSVAG---GKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
VW++VE P+G +G + VFK K D++G IE+YK LVA+GF Q +GI Y+E+ SP + S+R++++++A E Q+D A+L ++EEE+++ PE + K+ V LKK++YGL A W F + + GF+ + VD C++ ++ G +L+AS+ + L F +KD+GE SY +G I RDR+ G L Q YI+ + ERFG+ K S PS+A G S PQ + E + M +IPY VG+L++A T TRPDISF L ++ N G HW+ +K ++YL T++ +TY
Sbjct: 48 VWELVELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCS--PSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQGTKEYMLTY 373
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A5BAP9_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BAP9_VITVI) HSP 1 Score: 220 bits (560), Expect = 1.500e-60 Identity = 129/343 (37.61%), Postives = 189/343 (55.10%), Query Frame = 1
Query: 1 KIAIARKMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGV--TKTSIIPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
K A+ +M+ GVW +VE P G +G + VFK K D+ +IE+YK LV +G+ Q +GI ++E+ SP + S R++++++A E Q+D A+L D++EE+Y+E P + + K+ V L K++YGL A W F + GF+ + VD C++ R+ G +L+AS + L + F +KDLGETSY LG I RDR G L Q YI+ + +RF + K++ P V G K SK PQ D E EEM IPY +VG+LM+A TRPDI+F L + N G HW+ A+K L+YL T+DL +TY
Sbjct: 402 KEAMNDEMNSMYMNGVWDLVELPHGCKPVGCKWVFKTKCDSSWKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLELHQMDVKTAFLNGDLDEEVYIEQPTGFVEIGKEDLVCKLNKSIYGLKQASRQWYLKFDRIITQNGFKENTVDRCIYLRV-SGSSYIFLVLYVDDILLASNDPDLLIEIKHMLSTHFDMKDLGETSYVLGIKILRDRANGVLKLSQRAYIEKILKRFNMHNCKSTKAPIVKGHK-FSKAQCPQNDDEREEMRTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRSLSNLGSQHWKAAKKVLRYLQRTKDLMLTY 742
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A438CL20_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CL20_VITVI) HSP 1 Score: 221 bits (564), Expect = 2.840e-60 Identity = 129/343 (37.61%), Postives = 190/343 (55.39%), Query Frame = 1
Query: 1 KIAIARKMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGV--TKTSIIPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
K A+ +M+ GVW +VE P G +G + VFK K D+ G+IE+YK LV +G+ Q +GI ++E+ SP + S R++++++A E Q+D A+L D++EE+Y+E P + + K+ V L K++YGL A W F + GF+ + VD C++ R+ G +L+AS + L + F +KDLGE SY LG I RDR G L Q YI+ + +RF + K++ P V G K SK PQ D E EEM IPY +VG+LM+A TRPDI+F L ++ N G HW+ A+K L+YL T+DL +TY
Sbjct: 789 KEAMDDEMNSMYMNGVWDLVELPHGCKPVGCKWVFKTKRDSSGKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLELHQMDVKTAFLNGDLDEEVYMEQPIGFVEVGKEDLVCKLNKSIYGLKQASRQWYLKFDKIITQNGFKENTVDRCIYLRV-SGSSYIFLVLYVDDILLASNDPDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIERILKRFNMHNCKSTKAPIVKGDK-FSKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTY 1129
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A1J3K4I8_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K4I8_NOCCA) HSP 1 Score: 220 bits (560), Expect = 1.130e-59 Identity = 125/336 (37.20%), Postives = 183/336 (54.46%), Query Frame = 1
Query: 22 MDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVTK--TSIIPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
+D GVW +V P+G +G + +FK KLD +G +E+YK LVA+GF Q +GI Y E+ SP + S+R++L+++A E Q+D A+L D+EEE+Y+ PE + ++ V LKK++YGL A W F + GF+ + VDPC++ + G +L+AS+ Q L F +KD+GE SY +G I RDR+ G L Q YI + ERF + +S++P G K L PQ + E EM + PY +VG+LM+A TRPDIS L +F N G HW+ A+K L+YL TR+ +TY
Sbjct: 841 IDSMVKNGVWDIVPLPEGHKAVGCKWIFKTKLDCNGNVERYKARLVAKGFNQKEGIDYCETFSPVSRKDSLRIILALVAQYDLELHQMDVKTAFLNGDLEEEVYMRQPEGFIIEGQEDMVCKLKKSIYGLKQASRQWYLKFDEIITNFGFKENIVDPCIYLKF-SGSKFIFLVLYVDDILLASSDLGLLHQTKNYLSKNFDMKDMGEASYVIGIEIFRDRSLGILGLSQKAYIDRVLERFSMLSCSSSVVPMQKGDK-LDLKQCPQNEMERNEMQKYPYASLVGSLMYAQVCTRPDISHAVGMLGRFQSNPGIVHWQAAKKVLRYLKGTRNHMLTY 1174
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A251UJK4_HELAN (Putative zinc finger, CCHC-type n=7 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UJK4_HELAN) HSP 1 Score: 219 bits (559), Expect = 1.350e-59 Identity = 122/341 (35.78%), Postives = 192/341 (56.30%), Query Frame = 1
Query: 7 AIARKMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVT--KTSIIPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
A+ +++ VW +VE P G +G + VFK KLD +G +E+YK LVA+G+ Q +GI Y+E+ SP + S+R+V++++A E Q+D A+L D++E++Y++ PE + ++ V LKK++YGL A W F ++ +GF ++QVD C + + + G +L+AS + ++ R L F +KDLG+ SY +G I RDR+ G L Q YI + R+ + K S+ P V G P T+ E E+M QIPY +VG+LM+A TRPDI++ A L ++ N G HW+ A+K L+YL T+D +TY
Sbjct: 813 AMIDELESMKKNDVWDLVELPNGVKPVGCKWVFKTKLDPNGNVERYKARLVAKGYTQKEGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLDEDVYMKQPEGFKPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKRQGFMKNQVDQCTYLK-MSGSDFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGDASYVIGIEIHRDRHKGILGLSQKAYIDRVLTRYNMQQCKPSVAP-VVKGDVFGSFQCPTTEVEKEQMSQIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDYKLTY 1151
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 214 bits (544), Expect = 1.370e-59 Identity = 124/343 (36.15%), Postives = 184/343 (53.64%), Query Frame = 1
Query: 1 KIAIARKMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVTKT-SIIPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITYG 1020
K AI ++M + G + +VE PK ++G++ VF+ K + + IE YK LVAQGF QV GI + E+ +P SI ++L++ A WE Q+D AYL D+EEEIY++ P + K+ V LK+ +YGL +G + K EL + G RS+VD CVF V + TK R++ + F + DLGE + LG + RDR+ TL+ QH YI + RF + S+ + G LS P T + E+M IPYRE++G+LM+AA TRPDI++ L++F N G HW A++ +YL TR+ +T+G
Sbjct: 128 KEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFG 470
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A2P6SMQ0_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SMQ0_ROSCH) HSP 1 Score: 216 bits (551), Expect = 1.400e-59 Identity = 123/341 (36.07%), Postives = 190/341 (55.72%), Query Frame = 1
Query: 7 AIARKMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVTKTSI--IPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
A+ ++D GVW++V+ + +G + VFK K D G IE++K LVA+GF Q +GI++ E+ SP + S R++++++A E Q+D A+L ++EEEI++ PE + ++ K+ V LKK++YGL A W K F + + GF + VD CV+ +++ G +L+AS+ + + L S F +K+LGE SY LG I RDR G L Q YI + +RFG+ + +P G K L+K P+T+ E EM IPY +VG+LM+A TRPD+SF L++F N G HW +K L+YL T+D + Y
Sbjct: 266 AMIAELDSMYKNGVWELVKPKENHKPIGCKWVFKTKRDVSGNIERHKARLVAKGFTQKEGIYFTETFSPVSTKDSFRIIMALVAHYDMELHQMDVKTAFLNGELEEEIFMVQPEGFIEAGKENMVCRLKKSIYGLKQASRQWYKKFDSVVSSFGFTENLVDECVYLKVV-GNNFIFLILYVDDILLASSNVKLLKDTKAFLSSNFDMKELGEASYVLGIEIKRDRKQGLLGLSQQNYISKILKRFGMETCANGEVPMSKGDK-LTKNQCPKTENEKTEMESIPYARLVGSLMYAQVCTRPDLSFAVGMLSRFQSNPGHEHWTAGKKVLRYLQRTKDYMLVY 604
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A4V1T029_9SPHI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4V1T029_9SPHI) HSP 1 Score: 207 bits (528), Expect = 1.530e-59 Identity = 121/321 (37.69%), Postives = 182/321 (56.70%), Query Frame = 1
Query: 67 PKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVTKTS--IIPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
P+G +G + VFK KLD++G IE++K LVA+GF Q G+ Y+E+ SP + S+R+V++M+A E Q+D A+L +++EE++++ PE + K+ V LKK++YGL A W F + + GF+ + VD C++ +I G +L+A+ Q L F +KD+GE SY +G I+RDR+ G L Q YI + ERF + K S I+P G K S P+ + E ++M QIPY IVG+LM+A T TRP ISF L ++ N G HW+ A+K L+YL T+D +TY
Sbjct: 2 PEGCKRVGCKWVFKTKLDSNGNIERHKARLVAKGFTQKDGVDYKETFSPVSKKDSLRIVMAMVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFVVDGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVTSFGFKENIVDRCIYLKI-SGSKFIILVLYVDDILLATNDLGLLRQTKEFLSKNFEMKDMGEASYVIGIEISRDRSQGWLGLSQKAYINKVLERFKMDKCSAGIVPIQKGDK-FSLNQCPKNELERKQMEQIPYASIVGSLMYAQTCTRPGISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDRMLTY 320
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A2N9I7X4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I7X4_FAGSY) HSP 1 Score: 216 bits (550), Expect = 6.610e-59 Identity = 122/341 (35.78%), Postives = 188/341 (55.13%), Query Frame = 1
Query: 7 AIARKMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVY--CDSRKQVSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVT--KTSIIPSVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
A+ +M+ + GVW +VE P G +G + VFK K D+ G IE+YK +LVA+GF Q +GI Y E+ SP + S+R++L+++A E +Q+D A+L D+EEE+Y++ PE + D V LKK++YGL A W F + + GF + +D C+++++ G +L+A+ K + + L F +KD+GE SY +G I RDR G L Q YI + +RF + S+ P V G + + P+ D E E+M IPY VG+LM+A TRPDI+F L ++ + G HWR A+K ++YL T+D + Y
Sbjct: 409 AMKEEMNSMKSNGVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKAILVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFPSSDGEHLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKILKRFRMNDCSPSVAPIVKGDR-FNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMY 747
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Match: A0A445LQ30_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445LQ30_GLYSO) HSP 1 Score: 217 bits (553), Expect = 1.030e-58 Identity = 124/340 (36.47%), Postives = 185/340 (54.41%), Query Frame = 1
Query: 7 AIARKMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFRQVKGIHYEESSSPTLAQVSIRMVLSMIAALGWEARQLDGNMAYLEADVEEEIYVELPEVYCDSRKQ--VSLLKKAMYGLAHAGLLWLKTFGIELEAKGFQRSQVDPCVFRRILHGVVXXXXXXXXXXLLVASATKRNEEQAVRDLCSCFPIKDLGETSYYLGCHITRDRNAGTLTFDQHQYIQTMAERFGVTKTSIIP-SVAGGKALSKPDSPQTDAEVEEMHQIPYREIVGALMWAATMTRPDISFTAHQLAKFNDNTGPTHWREAQKALQYLWPTRDLGITY 1017
A+ ++D VW +VE PKG +G + VFK K D+ G +E+YK LVA+GF Q GI Y+E+ SP + S R++++++A E Q+D A+L D+EE++Y++ P + K+ V LKK++YGL A W F + + GF+ + VD CV+ ++ V LL + E + L S F +KD+GE SY +G I R+R+ G L Q YI + ERF + K S P + G S P+ D E ++M IPY +VG++M+A T TRPDISF L ++ N G HW+ A+K L+YL T+D +TY
Sbjct: 912 AMKEEIDSMEHNDVWDLVELPKGCKRVGYKWVFKTKRDSHGNLERYKARLVAKGFTQKDGIDYKETFSPVSRKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEDVYMDQPMGFSVEGKEHMVCKLKKSIYGLKQASRQWYLKFNDTIVSFGFKENTVDRCVYLKVSGSKVMFLVLYVDDILLATNDLGLFHETK-KFLSSNFEMKDMGEASYVIGIEIFRNRSQGLLGLSQKAYINKVLERFRMEKCSASPVPIQKGDKFSLAQCPKNDLERKQMEAIPYASVVGSIMYAQTCTRPDISFATGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDHILTY 1250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57214.13181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57214.13181.1 >prot_H-elongata_contig57214.13181.1 ID=prot_H-elongata_contig57214.13181.1|Name=mRNA_H-elongata_contig57214.13181.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp MDGQTTRGVWQVVERPKGKTVLGTRVVFKRKLDNDGRIEKYKCLLVAQGFback to top mRNA from alignment at H-elongata_contig57214:63..1302- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57214.13181.1 ID=mRNA_H-elongata_contig57214.13181.1|Name=mRNA_H-elongata_contig57214.13181.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1240bp|location=Sequence derived from alignment at H-elongata_contig57214:63..1302- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57214:63..1302- >mRNA_H-elongata_contig57214.13181.1 ID=mRNA_H-elongata_contig57214.13181.1|Name=mRNA_H-elongata_contig57214.13181.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2232bp|location=Sequence derived from alignment at H-elongata_contig57214:63..1302- (Himanthalia elongata Himel1 dioecious)back to top |