prot_H-elongata_contig5717.13173.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5717.13173.1
Unique Nameprot_H-elongata_contig5717.13173.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length480
Homology
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 5.050e-126
Identity = 263/467 (56.32%), Postives = 329/467 (70.45%), Query Frame = 0
Query:   25 PEVSKAAEFRRRNDRLFKRLGRVQAWKKLYHKMEFGVADRPLNFNQTD-ASVVLDVPASWGRNAEGRQSREEFEAQMRAHVDAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEIAATDPSFTRGERGLRGNMDTWPLPGQARFGFPTGLSVEARCLNHSVGAPGRQGAPPALARV-------VTPVGSGGGLAVSET---FVEGTSCAEQSKLRSKYRFKGHPEWQLEGMKRKKSKGQIKKENDKKAKREQQQ--SSMRLSKPRALQPDTYERFACAVCMVPRQPMLGSFRGYEEGGAAAGSEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAPASELGPGVVQCSQCGVRVHRKCYGVAEDVGGPEAG 478
            P V +++ F  +ND+L+ R  RVQ WK+LY+K+ FGVADRPLNFN+ D A     +PASW R+ +GRQS+EE+EA+ RA V+ ANKEDAVCMVCFDG+TD++ ++ IVYCDGC MSVH  CYG++D +ADF C+RC  LR ++ E+     + V C +CP IHGA K+T   ++ HM C+L  PG RM DL +K +ID+SE+  TDPSFT GERGL G+M  WP  G+AR+GFP G+SVEARCL HSVGAPGR+GAP   A V         P G+   +++ ET    V GT+C EQ  LR+KYR K  P WQ+EG K+KK+K Q+K+E  KKA+RE+Q   S+MR+S PR L PD+Y+R ACAVCM    P+L         G A      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +   +VQC++CGVRVHRKCYGV E VGGP AG
Sbjct:  795 PMVGESSSFVVKNDQLYTRYCRVQMWKRLYNKLHFGVADRPLNFNKIDVADCDSSIPASWRRDVDGRQSKEEYEAERRAAVEQANKEDAVCMVCFDGSTDESGNLTIVYCDGCDMSVHTDCYGIQDPKADFVCDRCTRLRELEAESKQTTGDEVNCFLCPNIHGALKRTTCGRFAHMTCLLMSPGVRMGDLKHKRRIDISEVDVTDPSFTMGERGLSGDMGAWPAAGEARYGFPAGMSVEARCLEHSVGAPGRKGAPAEAAAVQQLADADALPPGT---ISLGETAGGVVRGTTCEEQRDLRNKYRIKFQPAWQVEGKKKKKTKAQLKREQ-KKAEREKQSNVSTMRVSGPRPLDPDSYDRIACAVCMKIAAPVLL--------GPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEDLVQCAKCGVRVHRKCYGVPEGVGGPGAG 1249          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: A0A6H5LHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHH7_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.480e-68
Identity = 248/765 (32.42%), Postives = 310/765 (40.52%), Query Frame = 0
Query:   25 PEVSKAAEFRRRNDRLFKRLGRVQAWKKLYHKMEFGVADRPLNFNQTDASVVLDVPASWGRNAEGRQSREEFEAQMRAHVDAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEIAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDPSFTRGERGLRGNMDTWPLPGQARFGFPTGLSVEARCLNHSVGAPGRQGAPPALARV-------VTPVGSGGGLAVSET---FVEGTSCAEQSKLRSKYRFKGHPEW-QLEGMKRKKSKGQIKKENDKKAKREQQQ--SSMRLSKPRALQPDTYERFACAVCMVPRQPMLGSFRGYEEGGAAAGSEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAPASELGPGVVQCSQCGVRVHRKCYGVAEDVGGPEAG 478
            P V +A+ F  +ND+++ R  RVQ WK+LY+K+ FGVADRPLNFN+                     S+EE+EA+ RA V+ ANKEDAVCMVCFDG+TD++ ++ IVYCDGC MSVH  CYG++D +ADF C+RC  LR ++  +     + V C +CP IHGA K+T   ++ HM C+L  PG RM DL +K +ID+SE+                                                                                                                                                                                                                                                                                                            TDPSFTRGERGL G+M+ WP PG+ R+GFP G+SVEARCL HSVGAPGR+GAP   A V         P G+   +++ ET    V GT+  EQ  LR+KYR K  P   Q+EG K+KKS  Q+K+E   KA+RE+Q   S+MR+S PR L PD+Y+R ACAVCM    P+L                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +VQC++CGVRVHRKCYGV E VGGP AG
Sbjct:  717 PMVGEASSFAVKNDQVYTRYCRVQMWKRLYNKLHFGVADRPLNFNK---------------------SKEEYEAERRAAVEQANKEDAVCMVCFDGSTDESGNLTIVYCDGCDMSVHTDCYGIQDPKADFVCDRCTRLRELEAGSKQMTGDEVNCFLCPNIHGALKRTTCGRFAHMTCLLMSPGVRMGDLKHKKRIDISEVHTDVAVLPDLLPFNRTVLEAQQAAAKQLFLPAAEATTPPSSGAGAGAGGPEAGTNVVASGGSSGTDMAMVVAGPASAPAGESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNWSASVEAAGQQVASTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLAMEEEVSVVDVSAPSAAVGPGAMLEVTRPPPPVPQERNVPNRVFECCFCGVADGALLDCGITECGVGGGGCLRHGEGPVLGGGGSGGPSADGNLGDGRPVCGKRFHFLCAWFAGAYVKVDVTDPSFTRGERGLSGDMEAWPAPGEPRYGFPAGMSVEARCLEHSVGAPGRKGAPAEAAAVQQLADADALPPGT---ISLGETAGGVVRGTTWEEQRDLRNKYRMKDRPTVVQVEGKKKKKSXAQLKREQ--KAEREKQSNVSTMRVSGPRPLDPDSYDRIACAVCMKIAAPVL-----LGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLVQCAKCGVRVHRKCYGVPEGVGGPGAG 1450          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: A0A2P6U1C4_CHLSO (Peregrin isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U1C4_CHLSO)

HSP 1 Score: 82.8 bits (203), Expect = 6.120e-13
Identity = 51/152 (33.55%), Postives = 76/152 (50.00%), Query Frame = 0
Query:   84 GRNAEGRQSREEFEAQMRAH------VDAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDV-EADFCCERCKELRNIDHETGSADPE--------------------AVRCAVCPVIHGAFKKT-CGNQWVHMACMLTIP 207
            G +A+GR+     E  +RA             ++A C VC DG +  +   QIV+CD C ++VHQ CYG+  V E ++ CE C+E  ++    G  + +                    +VRCA+CP+ +GAFKK   G +WVH AC L +P
Sbjct:  793 GGDADGREGSPALEYALRADELYDVLAQREADQEAFCAVCGDGHSAAHN--QIVFCDRCDVAVHQQCYGIAVVPEGEWLCEPCREYEHVLRAQGVPETDIRPPGHAEAVNRQPLDGGARSVRCALCPIKYGAFKKAEDGQRWVHSACALWMP 942          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: A0A6G0X567_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X567_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.120e-12
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 0
Query:  113 VCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDV-EADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEIAATD 229
            VC+VC D  + +     I+YCDGC ++VHQHCYGV  + + D+ C+ C++          + P +  C +CP+  GA KKT  NQWVH+ C L IP   ++  +N   I L  +   D
Sbjct: 1153 VCVVCSDEVSTETD--PILYCDGCDIAVHQHCYGVPVIPDEDWFCDACRD---------KSKPNS--CVLCPIRKGALKKTSCNQWVHIQCFLWIPELVVK--VNGASIQLGSLETLD 1255          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: UPI0006C9C518 (PHD finger protein 14 n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C9C518)

HSP 1 Score: 81.3 bits (199), Expect = 1.650e-12
Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 0
Query:   97 EAQMRAHVDAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEIA 226
            +A+M   +D    +  +C  C    +DD    +IV CDGCG++VH+ CYGV DVE+    +   +      E  SA  E   C +CP   G FK+T   +WVH+ C L +PG    ++   T + L E+A
Sbjct:  111 QAEMGGPLDDKLSKMLICCGCLGDRSDDFN--EIVECDGCGVTVHEGCYGVSDVESFSSTDSLSQSAPWFCEACSAGVEDPNCELCPNKGGIFKETDVGKWVHLVCALYVPGVAFGEVDRLTSVTLFEMA 238          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: A0A0B1P294_UNCNE (Putative phd-finger domain-containing protein n=1 Tax=Uncinula necator TaxID=52586 RepID=A0A0B1P294_UNCNE)

HSP 1 Score: 80.1 bits (196), Expect = 3.470e-12
Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 0
Query:   98 AQMRAHVDAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDV-EADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIP 207
            A +     A  ++D+ C +C DG  ++     IV+CDGC ++VHQHCYGV  + E  + C +C+ +       G   P    C  CP + GAFK+T  ++W H+ C + IP
Sbjct:  421 AAVNGEAQAGEEQDSRCAICDDGDCENTN--AIVFCDGCDLAVHQHCYGVPFIPEGQWLCRKCQLI-------GRGVPT---CIFCPNLDGAFKQTSASKWAHLLCAIWIP 519          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: UPI0007382B18 (PHD finger protein 14 isoform X1 n=2 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007382B18)

HSP 1 Score: 79.3 bits (194), Expect = 6.570e-12
Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = 0
Query:  113 VCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEIAAT 228
            +C  C    +DD    +IV CDGCG++VH+ CYGV DVE+    +  ++      E  SA  E   C +CP   G FK+T   +WVH+ C L +PG    ++   + + L E+A T
Sbjct:  142 ICCGCLGDRSDDIN--EIVECDGCGVTVHEGCYGVSDVESFSSTDSLRQSAPWFCEACSAGVEDPSCELCPNKGGIFKETDVGKWVHLVCALYVPGVAFGEVDRLSSVTLFEMAYT 255          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: A0A6V7KMH8_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7KMH8_9HYME)

HSP 1 Score: 78.2 bits (191), Expect = 7.720e-12
Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 0
Query:   97 EAQMRAHVDAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEIA 226
            +A+    +D    +  +C  C    +DD    +IV CDGCG++VH+ CYGV DVE+    +  ++      E  SA  E   C +CP   G +K+T   +WVH+ C L +PG    ++   + + L E+A
Sbjct:   38 QAEKGVQLDEKLAKTLICCGCLGDRSDDIN--EIVECDGCGVTVHEGCYGVSDVESFSSTDSLRQSAPWFCEACSAGVEDPSCELCPNKGGIYKETDVGKWVHLVCALYVPGVAFGEVDRLSSVTLFEMA 165          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: A0A6P3X738_DINQU (PHD finger protein 14 isoform X1 n=9 Tax=Ponerini TaxID=141711 RepID=A0A6P3X738_DINQU)

HSP 1 Score: 79.0 bits (193), Expect = 8.580e-12
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 0
Query:  113 VCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEIAAT 228
            +C  C    +DD    +IV CDGCG+SVH+ CYGV DVE+    +   +      E  SA  E   C +CP   G FK+T   +WVH+ C L +PG    ++   T + L E+  T
Sbjct:  123 ICCGCLGDRSDDTN--EIVECDGCGVSVHEGCYGVSDVESFSSTDSLCQSAPWFCEACSAGIEDPSCELCPNKGGIFKETDVGKWVHLVCALYVPGVAFGEVDRLTSVTLFEMQYT 236          
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Match: UPI0006C99DFE (PHD finger protein 14 n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C99DFE)

HSP 1 Score: 79.0 bits (193), Expect = 8.640e-12
Identity = 43/113 (38.05%), Postives = 60/113 (53.10%), Query Frame = 0
Query:  113 VCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHMACMLTIPGSRMEDLINKTQIDLSEI 225
            VC  C    +DD    +IV CDGCG++VH+ CYGV DVE+    +   +      E  SA  E + C +CP   G FK+T   +WVH+ C L +PG    ++   T I L E+
Sbjct:  149 VCCGCLGDRSDDVN--EIVECDGCGVTVHEGCYGVSDVESFSSTDSSSQSAPWFCEACSAGIEDICCELCPNKGGIFKETDVGKWVHLVCALYVPGVAFGEVDKLTNITLFEM 259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5717.13173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV42_ECTSI5.050e-12656.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LHH7_9PHAE1.480e-6832.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6U1C4_CHLSO6.120e-1333.55Peregrin isoform X1 n=1 Tax=Chlorella sorokiniana ... [more]
A0A6G0X567_9STRA1.120e-1237.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI0006C9C5181.650e-1234.62PHD finger protein 14 n=1 Tax=Copidosoma floridanu... [more]
A0A0B1P294_UNCNE3.470e-1235.14Putative phd-finger domain-containing protein n=1 ... [more]
UPI0007382B186.570e-1236.21PHD finger protein 14 isoform X1 n=2 Tax=Diachasma... [more]
A0A6V7KMH8_9HYME7.720e-1232.31Uncharacterized protein (Fragment) n=1 Tax=Bracon ... [more]
A0A6P3X738_DINQU8.580e-1237.07PHD finger protein 14 isoform X1 n=9 Tax=Ponerini ... [more]
UPI0006C99DFE8.640e-1238.05PHD finger protein 14 n=1 Tax=Trichogramma pretios... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 113..160
e-value: 4.1E-4
score: 29.7
NoneNo IPR availablePFAMPF13831PHD_2coord: 129..160
e-value: 4.0E-9
score: 35.9
coord: 451..471
e-value: 9.6E-7
score: 28.3
NoneNo IPR availablePFAMPF13832zf-HC5HC2H_2coord: 178..227
e-value: 1.1E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR13793PHD FINGER PROTEINScoord: 92..211
NoneNo IPR availablePANTHERPTHR13793:SF107BR140, ISOFORM Acoord: 92..211
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 97..166
e-value: 1.1E-13
score: 52.4
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 114..159
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 108..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5717contigH-elongata_contig5717:4974..10104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5717.13173.1mRNA_H-elongata_contig5717.13173.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5717 3015..10149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5717.13173.1 ID=prot_H-elongata_contig5717.13173.1|Name=mRNA_H-elongata_contig5717.13173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=480bp
MQAKLKEITSSSRSKLEAAITRCTPEVSKAAEFRRRNDRLFKRLGRVQAW
KKLYHKMEFGVADRPLNFNQTDASVVLDVPASWGRNAEGRQSREEFEAQM
RAHVDAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDV
EADFCCERCKELRNIDHETGSADPEAVRCAVCPVIHGAFKKTCGNQWVHM
ACMLTIPGSRMEDLINKTQIDLSEIAATDPSFTRGERGLRGNMDTWPLPG
QARFGFPTGLSVEARCLNHSVGAPGRQGAPPALARVVTPVGSGGGLAVSE
TFVEGTSCAEQSKLRSKYRFKGHPEWQLEGMKRKKSKGQIKKENDKKAKR
EQQQSSMRLSKPRALQPDTYERFACAVCMVPRQPMLGSFRGYEEGGAAAG
SEVAAARSGVAAARSGVAAARSGVAAAGSGVAAAGSGVAADAPASELGPG
VVQCSQCGVRVHRKCYGVAEDVGGPEAGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD