prot_H-elongata_contig56868.13140.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56868.13140.1
Unique Nameprot_H-elongata_contig56868.13140.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: D7G6Q6_ECTSI (COX17 homolog, cytochrome c oxidase assembly protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q6_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 6.950e-14
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            S P    ARDDCVIMNGE++CK FIEAHK CLRSEGFDI
Sbjct:   44 SCPDTKAARDDCVIMNGEEECKNFIEAHKECLRSEGFDI 82          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: A0A0P1B2C6_PLAHL (Cytochrome c oxidase copper chaperone n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2C6_PLAHL)

HSP 1 Score: 63.9 bits (154), Expect = 1.480e-12
Identity = 28/39 (71.79%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            S P   QARD C++ NGEDQCKE IEAHK CLRSEGF I
Sbjct:   26 SCPTTKQARDLCIVKNGEDQCKELIEAHKACLRSEGFKI 64          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: A0A662WGN7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGN7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 8.990e-12
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            S P   QARD CV+ NGED+CKE IEAHK CLRSEGF +
Sbjct:   28 SCPTTKQARDLCVVTNGEDKCKEVIEAHKACLRSEGFTV 66          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: F0ZZA3_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZZA3_DICPU)

HSP 1 Score: 60.8 bits (146), Expect = 2.340e-11
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            + P   + RD+C++ NGED+C +FIEAHK CLRSEGFD+
Sbjct:   25 ACPETKKTRDECIVNNGEDKCAQFIEAHKACLRSEGFDV 63          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: UPI000644844F (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644844F)

HSP 1 Score: 60.5 bits (145), Expect = 3.320e-11
Identity = 23/39 (58.97%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            + P   + RD+C++MNGED+C  FIEAHK CLR+EGFD+
Sbjct:   25 TCPETKKIRDECIVMNGEDKCLGFIEAHKQCLRAEGFDV 63          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: F4PHQ2_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PHQ2_CAVFA)

HSP 1 Score: 60.1 bits (144), Expect = 5.460e-11
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            + P   + RD+C++ NGED+C +FIEAHK+CLR+EGFDI
Sbjct:   31 ACPETKKIRDECILQNGEDKCFQFIEAHKVCLRAEGFDI 69          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: D0NN32_PHYIT (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0NN32_PHYIT)

HSP 1 Score: 59.7 bits (143), Expect = 7.040e-11
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            S P   QARD C++ NG+D+CK+ IEAHK CLRSEGF I
Sbjct:   26 SCPTTKQARDLCIVNNGQDKCKDIIEAHKACLRSEGFTI 64          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: A0A2A9ML35_9APIC (Putative copper chaperone COX17-1 n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9ML35_9APIC)

HSP 1 Score: 59.7 bits (143), Expect = 9.660e-11
Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    8 ARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            ARD+C+++NGE+ CK FIEAH  CLRSEGFD+
Sbjct:   46 ARDECIVLNGEENCKTFIEAHNQCLRSEGFDV 77          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: A0A3M6VF95_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF95_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.000e-10
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            S P   QARD CV+ NGE+ CK+ IEAHK CLRSEGF +
Sbjct:   26 SCPTTKQARDLCVVRNGEENCKDIIEAHKACLRSEGFTV 64          
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Match: A0A8K1CGW3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGW3_PYTOL)

HSP 1 Score: 58.9 bits (141), Expect = 1.680e-10
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDI 39
            S P   +ARD CV+ NGE+ CKE IEAHK+CLRSEGF +
Sbjct:   33 SCPDTKKARDLCVVTNGEENCKELIEAHKICLRSEGFTV 71          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56868.13140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Q6_ECTSI6.950e-1476.92COX17 homolog, cytochrome c oxidase assembly prote... [more]
A0A0P1B2C6_PLAHL1.480e-1271.79Cytochrome c oxidase copper chaperone n=1 Tax=Plas... [more]
A0A662WGN7_9STRA8.990e-1269.23Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
F0ZZA3_DICPU2.340e-1158.97Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
UPI000644844F3.320e-1158.97hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4PHQ2_CAVFA5.460e-1158.97Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
D0NN32_PHYIT7.040e-1164.10Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A2A9ML35_9APIC9.660e-1168.75Putative copper chaperone COX17-1 n=1 Tax=Besnoiti... [more]
A0A3M6VF95_9STRA1.000e-1064.10Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A8K1CGW3_PYTOL1.680e-1064.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007745Cytochrome c oxidase copper chaperonePFAMPF05051COX17coord: 7..39
e-value: 5.3E-13
score: 49.1
IPR007745Cytochrome c oxidase copper chaperonePANTHERPTHR16719CYTOCHROME C OXIDASE COPPER CHAPERONEcoord: 3..39
NoneNo IPR availableGENE3D1.10.287.1130coord: 1..39
e-value: 3.7E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR16719:SF0CYTOCHROME C OXIDASE COPPER CHAPERONEcoord: 3..39
NoneNo IPR availablePRODOMPD014904coord: 7..39
e-value: 3.0E-7
score: 125.0
IPR009069Cysteine alpha-hairpin motif superfamilySUPERFAMILY47072Cysteine alpha-hairpin motifcoord: 5..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56868contigH-elongata_contig56868:1730..1852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56868.13140.1mRNA_H-elongata_contig56868.13140.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56868 1730..1852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56868.13140.1 ID=prot_H-elongata_contig56868.13140.1|Name=mRNA_H-elongata_contig56868.13140.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
SLPARLQARDDCVIMNGEDQCKEFIEAHKMCLRSEGFDIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007745Cyt_c_oxidase_Cu-chaperone
IPR009069Cys_alpha_HP_mot_SF