prot_H-elongata_contig56860.13139.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56860.13139.1
Unique Nameprot_H-elongata_contig56860.13139.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
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BLAST of mRNA_H-elongata_contig56860.13139.1 vs. uniprot
Match: D7FS42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS42_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 6.710e-16
Identity = 63/169 (37.28%), Postives = 81/169 (47.93%), Query Frame = 0 
Query:    2 KVKRKELADEVKITPQELDKICVDMVIKCGLGDSDYITKALRINVPRSGDNGQVTD-GKTMKRTSPGYNRAGADADASLATAMTTEKRLGIPESSLPASPENSDA---------PPGMLEKRLDFSRATTTGGPRNQAATTAA--DPTAPLSSLVKRLRKMESPRYDEW 158
            K+ RK +A  VK+ P++LDKIC DMV KCG    ++  K  R+  P SGD GQ    GK  +  SP             ATA TT     +     PAS + S                EKR+DF  A   G   +   T AA  DP APL++ VKRL+++ES  Y EW
Sbjct:  169 KLDRKAVAAMVKLQPKDLDKICGDMVAKCGPSGLEHAAKVFRVETPGSGDRGQEAHKGKGKRPLSPRDRGXXXXXXXXPATATTTRLDELVDGDRSPASAQQSSGRXXXXXXXXXXXRTEKRIDFLEA---GRASSSVPTHAAVADPAAPLNAFVKRLQRLESKSYAEW 334
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56860.13139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS42_ECTSI6.710e-1637.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56860contigH-elongata_contig56860:1014..1957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56860.13139.1mRNA_H-elongata_contig56860.13139.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56860 586..3237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56860.13139.1 ID=prot_H-elongata_contig56860.13139.1|Name=mRNA_H-elongata_contig56860.13139.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
MKVKRKELADEVKITPQELDKICVDMVIKCGLGDSDYITKALRINVPRSG
DNGQVTDGKTMKRTSPGYNRAGADADASLATAMTTEKRLGIPESSLPASP
ENSDAPPGMLEKRLDFSRATTTGGPRNQAATTAADPTAPLSSLVKRLRKM
ESPRYDEWVQRALQGTMESSGR*
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