prot_H-elongata_contig56835.13134.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56835.13134.1
Unique Nameprot_H-elongata_contig56835.13134.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
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BLAST of mRNA_H-elongata_contig56835.13134.1 vs. uniprot
Match: A0A6H5JH51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH51_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.790e-14
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0 
Query:    2 DLRLLDDAISLLTPSEAQVRVVEVDTFTESERSIARGNIPLDDKNSNYALRQKTIILKRAAPSD-------ASPEQPVASEKTKIMTEKIPPSA 88
            DL+LLD+AISLL P EA VRVVEVDTFTESERSI +G+  +   + +++LRQ T I KRA+PS        A+ +    +E++ +  E + P A
Sbjct:   41 DLKLLDEAISLLNPPEAHVRVVEVDTFTESERSIVKGSARIG--HGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEESDVAPEDLTPEA 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56835.13134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH51_9PHAE7.790e-1447.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56835contigH-elongata_contig56835:1061..2086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56835.13134.1mRNA_H-elongata_contig56835.13134.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56835 922..2086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56835.13134.1 ID=prot_H-elongata_contig56835.13134.1|Name=mRNA_H-elongata_contig56835.13134.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
DDLRLLDDAISLLTPSEAQVRVVEVDTFTESERSIARGNIPLDDKNSNYA
LRQKTIILKRAAPSDASPEQPVASEKTKIMTEKIPPSATTGNPAAFGADP
KIGEPTKDAAADSAAGVDRERSGGGVRERMS*
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