mRNA_H-elongata_contig56831.13133.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: D8LH82_ECTSI (HAD-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH82_ECTSI) HSP 1 Score: 217 bits (552), Expect = 4.970e-65 Identity = 109/181 (60.22%), Postives = 134/181 (74.03%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNR------HGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIET--AACGILGALGMLDLFCCLEIHRGNKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSCLSRLEMREWLQPKADQDD 520
+WP YCHE+T GPY R DS V C S G KVVRLFP+V+ +LRCL++Q SIRLA+ASRSPI+ AA GILGA+G+L LFCCLEIH G+KA+H +NI ATGV YRDM+FFDD+K N+KTV LGV CIKV K+ GLTF AV +GLK+YR++CLSR +R W P A ++D
Sbjct: 84 VWPVYCHEETRGPYTRCLGNTRFCDSESAVECYSSFGGKKVVRLFPDVVALLRCLQQQGSIRLAVASRSPIDEGGAARGILGAVGLLGLFCCLEIHTGSKAKHFQNIHAATGVEYRDMLFFDDEKHNIKTVRRLGVTCIKVSKESGLTFAAVNAGLKEYREACLSRSSLRGWFTPAAPKED 264
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: A0A6H5KSC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC5_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.360e-64 Identity = 108/181 (59.67%), Postives = 135/181 (74.59%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNR------HGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIET--AACGILGALGMLDLFCCLEIHRGNKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSCLSRLEMREWLQPKADQDD 520
+WP YCHE+T GPY R +S V C S G KVVRLFP+V+ +LRCL++Q SIRLA+ASRSP++ AA GILGALG+LDLFCCLEIH G+KA+H +NI ATGV YR+M+FFDD+K N+KTV LGV C+KV K+ GLTF AV +GLKKYR++CLSR +R W P A ++D
Sbjct: 84 VWPVYCHEETRGPYTRGLGNTHFCNSESTVKCSSF-GREKVVRLFPDVVALLRCLQQQGSIRLAVASRSPVDEGGAARGILGALGLLDLFCCLEIHTGSKAKHFQNIHAATGVEYREMLFFDDEKHNIKTVRRLGVTCVKVSKESGLTFAAVNAGLKKYREACLSRSSLRGWFTPVAPKED 263
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: A0A1Z5KYM7_ORNMO (Magnesium-dependent phosphatase 1 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KYM7_ORNMO) HSP 1 Score: 94.7 bits (234), Expect = 1.130e-19 Identity = 58/159 (36.48%), Postives = 85/159 (53.46%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNR--HGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRGNKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSCLS 472
LWPFY P+ + HG D+ K +R++PEV ++L LKR+ + L +ASR+ AA +LG L F EI+ G K H +++GV Y+DM+FFDD+ RN+ VS LGV C+ ++ G+T + GLKK+ LS
Sbjct: 14 LWPFYVDTHVTSPFRKASHGKIVDKHG--------KTIRVYPEVPEMLERLKREKYV-LGVASRTDDPDAARELLGILNWNKYFTYQEIYPGCKVAHFNKFASSSGVTYKDMLFFDDEHRNIVDVSKLGVTCVYAER--GMTKAVLEEGLKKFEDRPLS 161
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: A9NR44_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NR44_PICSI) HSP 1 Score: 93.6 bits (231), Expect = 3.340e-19 Identity = 57/160 (35.62%), Postives = 87/160 (54.37%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNRHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRG--NKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSCLSR 475
LWPFYC ++ SRD+ S L+P+ +L LK + + +AIASR+P + A L LG+ LF +EI+ +K +H + I TGVP++ M+FFDD+ RN++ VS GV I V G+ DA+++GL++Y S S+
Sbjct: 32 LWPFYCECRS---------SRDKPS------------LYPQANGILNALKEK-GVSMAIASRTPTPSIANAFLNKLGITSLFTAMEIYPSGTHKTQHFQKIQQKTGVPFKSMLFFDDENRNIEAVSNFGVTSILVGN--GVNLDALKTGLRRYSGSSASQ 167
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: A0A1Y1HW93_KLENI (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HW93_KLENI) HSP 1 Score: 92.0 bits (227), Expect = 1.290e-18 Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNRHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRG--NKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQS 463
+WPF+C +T RL+PEV + LK + I +A+ASR+P A LG L + LF EI+ +K EH K ++ T VPY DM+FFDD+ RNV T+S +GV C+ V+ G+ A+R GL K+++S
Sbjct: 33 IWPFWCEVKTT---------------------RSQPRLYPEVRGIFEALK-EAGIPMAVASRTPSPNIATVFLGKLQLTSLFAQQEIYPTFTHKTEHFKALLQGTKVPYEDMLFFDDEDRNVDTISPMGVKCVLVED--GVNLSALREGLAKFQKS 164
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: A0A2P8Y3X9_BLAGE (Magnesium-dependent phosphatase 1 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Y3X9_BLAGE) HSP 1 Score: 90.5 bits (223), Expect = 5.110e-18 Identity = 59/157 (37.58%), Postives = 83/157 (52.87%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYN--RHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRGNKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSC 466
LWPF + T P++ R G+ D + G KV + FPEV +L L LA+ASR A +L + F EI+ G K +H +N+ +G+ Y +M+FFDDDKRN++ +S LGV I+V KD G+TF V SGL + C
Sbjct: 26 LWPFRVDKNTKTPFHISRKGNVVD------VRG--KVFKTFPEVSQLLTALSEN-RYNLALASRIEDIPGAYQLLHFFDLTHYFVYKEIYPGTKTKHFENLHIKSGIDYENMLFFDDDKRNIRDISRLGVTVIQVPKD-GITFSVVNSGLLAFSVGC 172
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: V9LFF5_CALMI (Magnesium-dependent phosphatase 1-like protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9LFF5_CALMI) HSP 1 Score: 90.1 bits (222), Expect = 5.950e-18 Identity = 52/158 (32.91%), Postives = 88/158 (55.70%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNRHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRGNKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSCLSR 475
LWPF+ P+ + +S+ ++ ++V+ L+P+VL++LR LKR +LA SR+ + A +L M F +I+ G+K H + I ++G+ Y+ M+FFDD++RN+ VS LGV CI V G+T + G++++ Q SR
Sbjct: 17 LWPFWVDTHVNPPFRMNKNSQ------VVDSANRVISLYPDVLNILRDLKRD-GFQLAAVSRTGEKQGANQLLSLFEMEQYFSYKQIYPGSKVTHFQRIRDSSGIKYQHMIFFDDEQRNITDVSQLGVTCILVPN--GMTQKILEDGMRRFAQDQKSR 165
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: A0A1S3ZCZ5_TOBAC (magnesium-dependent phosphatase 1-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S3ZCZ5_TOBAC) HSP 1 Score: 90.5 bits (223), Expect = 6.810e-18 Identity = 59/175 (33.71%), Postives = 89/175 (50.86%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNRHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRG--NKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSCLSRLEMREWLQPKADQDD 520
LWPFYC CRS + ++ L+P +L LK + + +AIASRSP A L LG+ +F EI +K EH + I+ TGVPY++M+FFDD+ RN+++VS +GV I VD G+ A++ L ++ Q+ S + +E P + D
Sbjct: 32 LWPFYC------------------ECRSKQ---QMPYLYPHAKGILYALKDK-GVNIAIASRSPTPDIANTFLDKLGLTSIFAAKEIFSSWTHKTEHFQKIIRRTGVPYKEMLFFDDEDRNIESVSKMGVTSILVDD--GVNLGALKQALSEFAQNSASGKKNKEKRLPDSSISD 182
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: UPI0003F0D906 (magnesium-dependent phosphatase 1 n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0D906) HSP 1 Score: 89.7 bits (221), Expect = 7.830e-18 Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNRHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRGNKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQS 463
LWPF+ P+NR D + R G + +RL+P+V ++L LK + I A ASR+ A +L ++ F LEI+ G+K H + + TG+P+ M+FFDD+KRN+ VS LGV CI + M L A+ GL+ + +S
Sbjct: 16 LWPFWVDTHVDPPFNRSSDG----TVRDSRG--QTIRLYPDVPEILERLKG-LGIPTAAASRTGEIEGANQLLKLFDLVKYFVHLEIYPGSKVTHFQRLQQKTGIPFSQMIFFDDEKRNIVDVSKLGVTCIHIQNGMNL--QALTQGLETFAKS 160
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Match: M1D3S5_SOLTU (Magnesium-dependent phosphatase n=2 Tax=Solanum TaxID=4107 RepID=M1D3S5_SOLTU) HSP 1 Score: 90.1 bits (222), Expect = 9.410e-18 Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 2
Query: 2 LWPFYCHEQTMGPYNRHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIASRSPIETAACGILGALGMLDLFCCLEIHRG--NKAEHAKNIMTATGVPYRDMMFFDDDKRNVKTVSGLGVCCIKVDKDMGLTFDAVRSGLKKYRQSCLS 472
LWPFYC C S + ++ L+P D+L LK + + +AIASRSP A L LG+ LF EI +K EH + I TGVPY++M+FFDD+ RN++ VS +GV + VD G+ +A+R GL ++ Q+ S
Sbjct: 32 LWPFYC------------------ECLSKQ---QMPSLYPHGKDILYALKDK-GVNIAIASRSPTPDIANTFLDKLGLSSLFVAKEIFSSWTHKTEHFQKINRRTGVPYKEMLFFDDEDRNIEAVSKMGVTSVLVDD--GVNLEALRQGLSEFAQNSSS 166 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56831.13133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56831.13133.1 >prot_H-elongata_contig56831.13133.1 ID=prot_H-elongata_contig56831.13133.1|Name=mRNA_H-elongata_contig56831.13133.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp MGPYNRHGDSRDEVSCRSLEGVHKVVRLFPEVLDVLRCLKRQVSIRLAIAback to top mRNA from alignment at H-elongata_contig56831:1918..3650+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56831.13133.1 ID=mRNA_H-elongata_contig56831.13133.1|Name=mRNA_H-elongata_contig56831.13133.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1733bp|location=Sequence derived from alignment at H-elongata_contig56831:1918..3650+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56831:1918..3650+ >mRNA_H-elongata_contig56831.13133.1 ID=mRNA_H-elongata_contig56831.13133.1|Name=mRNA_H-elongata_contig56831.13133.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at H-elongata_contig56831:1918..3650+ (Himanthalia elongata Himel1 dioecious)back to top |