mRNA_H-elongata_contig56778.13126.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 316 bits (810), Expect = 1.350e-98 Identity = 205/520 (39.42%), Postives = 282/520 (54.23%), Query Frame = 1
Query: 19 LLKGKHICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGLEGKVIVITTDCEPSMVKMGRLLK-DSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDKLAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSELAASNDADITAVRTAVI-------------------DILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAV-KVREEKSPTGFSPQAPAAXXXXXXXXXXXQVASARKXRRGGGF----------------------------------MEAFQVTGGLKMYEPGKVGEDENKCYVVYLDPLDWWRVKRKNVPYLASLARRVLTIPT-QAESKRLFFCAGNVVTKNRNGLCPKIVKLLVLLRHSW 1410
+L + + ITTDGWTS N++YMS+T++ I WKL +S++C+K GTTTGE +A V V +H L G+VI TDCEPSM+K GRLL+ D + H+GC+NHR+E+T+S VFNG + A+ LAR LV Y SSQMA L Q I L E V+QDV RWW T +MV RLL L +AI HE D++ P+L+ DW +L ++ PIL PF+K Q LEG QYVTGS+ + + +L L A+ DL +A + T + +IL YREG RR+P+G K QV A ALDPR K YG++ E VW+ + A V+IA+ K +K+P S + PA+ A K R F + AF+ G+++++ K + K V+ +PLD WR K+ P LA+LARRVL IP+ QA+S+R+F AG VT R+ L + V+LLV LR+ W
Sbjct: 35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPA--SAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKK---VFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVW 547
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 301 bits (771), Expect = 2.440e-90 Identity = 184/395 (46.58%), Postives = 225/395 (56.96%), Query Frame = 1
Query: 1 MTKIFNLLKGKHICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGLEGKVIVITTDCEPSMVKMGRLLK-DSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDKLAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSELAASNDADITAVRTAVI------------------DILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAVKVRE-EKSPTGFSPQAP-AAXXXXXXXXXXXQVASARKXRRGGG 1122
M K+ L++G+ +CIT+DGWTSCANDTYMS+T +LITS+WKLV +SV+CSKS GTTTG+ +A G+KA VAKHGL GKV +TTDCEPSMVKMGRLL D+ +GC N+RLE+TSSIVFNG V K M LARGLV Y TSSQ A+ L QFV+ YLG + K+VIQDV VTGSLVVPFI+DL L DA+DDL EL +DA++ AV+ +IL Y+EG RR+P G KP+ VLA ALDPRTK+ YGV+++EK VWK +QE V+IAV+ R E S S Q P AA S+RK R GG
Sbjct: 29 MEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV----------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAAGPALSSTSAGAEESSRKRPRVGG 359
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 290 bits (742), Expect = 1.060e-88 Identity = 186/488 (38.11%), Postives = 266/488 (54.51%), Query Frame = 1
Query: 19 LLKGKHICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGLEGKVIVITTDCEPSMVKMGRLLKDSNACV-HVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDKLAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSE-----LAASNDADITAVRTAV--------------IDILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAVKVREEKSPTGFSPQAPAAXXXXXXXXXXXQVASARKXR------------------RGGGFME---------------AFQVTGGLKMYEPGKVGEDENKCYVVYLDPLDWWRVKRKNVPYLASLARRVLTIPT-QAESKRL 1320
+L +++ ITTDGWTS +N++YMS+T++ I W+L +S+ C+K G+T GE +A + + + +HGL G+V TDCEPSMVK GRLL+ + + H+GC+NHR+E+T+S VFNG + A+A AR +V Y SSQM+ LA F+ I L V+QDV RWW + +M+ RLL L +AI HE D +AP+L+ DW +L ++ PIL PF++ Q LEG +YVTGS+ VP I +L L A+ DL ++AS + AV IL YREG RR+P+G K QV A A+DPR K YG+ E VW+ + V+IA + + T S APAA + ++ R GG ++ +FQ T G+ ++ G G+ VY DPLDWWR ++ P+LA+LARRVL IP+ QA S+R+
Sbjct: 71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAE-KFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKK------VYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 296 bits (758), Expect = 1.970e-87 Identity = 212/551 (38.48%), Postives = 290/551 (52.63%), Query Frame = 1
Query: 22 LKGKHICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGLEGKVIVITTDCEPSMVKMGRLLKDSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDKLAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSELAASNDADITAVRTAVI------------------DILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAVKVREEKSP-----------------------------------------------TGFS----PQAPAAXXXXXXXXXXXQV--------------ASARKXRRG-----GGFMEAFQVTGGLKMYEPGKVGEDENKCYVVYLDPLDWWRVKRKNVPYLASLARRVLTIPT-QAESKRLFFCAGNVVTKNRNGLCPKIVKLLVLLRHS 1407
+ G+H+ +T+DGWT +NDTYMS T + I+S++ LV + +EC K T GE + E VKA +A++GL G+ + ITTDCE SMVK GRLL+++ H+GC HRLE+ +S F G GVSKA+ALARG+V Y+ SSQ ++ L Q I + E+K V+QDV RWW T + RL+ LRR I +HE D P+L DW +L +V +L+PF+ Q LE + VT LV P+I DL L++AV+ L + ++ + + VI D+L Y EG RR+PRG K QVLA AL PR+K YG+E+ E VW V++A++ + + G S P PA XXXXXXXXXXX AS+ RR ++AF++T GL + K E K PL+WWRVK + P LASLARRVL IP QA+S+R+F AG VVTK R + P+ V L+V LR++
Sbjct: 1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDI-VQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGK-------PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 282 bits (721), Expect = 2.930e-86 Identity = 191/475 (40.21%), Postives = 269/475 (56.63%), Query Frame = 1
Query: 7 KIFNLLKGKHICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGLEGKVIVITTDCEPSMVKMGRLLKDSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDKLAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSELAASNDADITAVRTAVIDILTYREGSRR--KPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAV--KVREEKSPTGFS----PQAPAAXXXXXXXXXXXQVASARKXRRGGGFMEAFQVTGGLKMYEPGKVGEDENKCYVVYLDPLDWWRVKRKNVPYLASLARRVLTIP-TQAESKRLFFCAGNVVTKNRNGLCPKIVKLLVLLRH 1404
++ L G+H+ +T+DGWTS +NDTYM T + I+S++ LV + VEC K G TTGE + E VKA +A++GL + + TTDCEPSMVK GRLL+++ H+GC HRLE+ +S F G GVSKA+ALAR +V Y+ SSQ ++ L Q +R + E+KKV+QDV RWW T + + RLL LRR I +HE D + P+L DW +L +V P+ +PF+ +Q E + VT SLV+P+I DL L++AV+ L A ++ + + V + + +PRG K QVLA ALDPR+K YG+E+ E VW+ + V++A+ K E+ G S P PAAXXXXXXXXXX F A V PG + N +S RVL IP +Q +S+R+F AG VVTK R + P+ V+L++ LR+
Sbjct: 40 EVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSLIPVEPAAXXXXXXXXXXD-------------FAAASAV--------PGDKQQSANA----------------------SSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRN 470
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 236 bits (601), Expect = 1.220e-69 Identity = 148/386 (38.34%), Postives = 207/386 (53.63%), Query Frame = 1
Query: 64 SCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGLEGKVIVITTDCEPSMVKMGRLLKDSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDKLAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSELAASNDADITAVRTAVI------------------DILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAV--KVREEKSPTGFS----PQAPAAXXXXXXXXXXXQVASARKXRRGGGFMEAFQVTG 1149
S +NDTYM+ T + I+S++ LV + +E K G TTGE + E VKA +A++GL G+ + TTDCEP MVK GRLL+++ H+GC HR E+ +S F G GVSKA+AL RG+V Y+ SSQ +N L Q I + E+KKV+QDV RWW T E D + P+L DW +L +V P+L PF+ Q LE + VT SLV +I DL L++A++ L + ++ + + ++ D+L Y EG RR+PRG K QVLA ALDPR+K YG+E+ E VW+ + V++A+ K E+ G S P PAA A+A + RR GF A G
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDI-VQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSPIPVEPAA-------------AAAYQPRRRRGFATASAAHG 358
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 174 bits (440), Expect = 5.800e-47 Identity = 118/235 (50.21%), Postives = 143/235 (60.85%), Query Frame = 1
Query: 826 DILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAVKVRE-EKSPTGFSPQAPAAXXXXXXXXXXXQ----------------------VASARKXRRGGGF---------------MEAFQVTGGLKMYEPGKVGEDENKCYVVYLDPLDWWRVKRKNVPYLASLARRVLTIP-TQAESKRLFFCAGNVVTKNRNGLCPKIVKLLVLLRHSWE 1413
+IL Y+EG RR+P G KP+QVLA ALDPRTK+ YGV+++EK VWK ++E V+IAV+ R E S S Q P XXXXXXXXXXX V AR + G + AF+V+ G+KMYE K G VYLDPLDWWRV+ + P+LA+LARRVL IP TQAES+RLF CAGN+VTKNRN L P V+LLVLLRHSW+
Sbjct: 60 NILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAK------VYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWK 288
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: UPI001955D638 (E3 SUMO-protein ligase ZBED1-like isoform X1 n=3 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955D638) HSP 1 Score: 128 bits (321), Expect = 1.630e-28 Identity = 134/477 (28.09%), Postives = 212/477 (44.44%), Query Frame = 1
Query: 34 HICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGL-EGKVIVITTDCEPSMVKMGRLLKDSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDK----LAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSELAASNDADITA-VRTAVIDILT--YREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVV-EIAVKVREEKSPTGFSPQAPAAXXXXXXXXXXXQVASARKXRRGGGFMEAFQVTGGLKMYEPGKVG-EDENKCYVVY------LDPLDWWRVKRKNVPYLASLARRVLTIPTQAE-SKRLFFCAGNVVTKNRNGLCPKIVKLLVLLRHSWE 1413
H TTD WTS ++ Y+S+T I +W+L ++ S TG+++A+G+K A+A L E +++ +TTD ++V R+ N + C HRL + +A+ + + +V +S+S + LA + L + K+I + RW M+ R LE +AI DK L P T D +L V L P ++ L G+Q VT S + P + + N V + S+D ++T ++ +++ L Y E ++ L LA LDPR K RY + K ++ AV E+ V EE SPT A A + A K G F + + G E + E E + Y++ ++PLDWW+ + N P L LA++ L IP + S+R F GN+VT +R L P V LV L H+ +
Sbjct: 56 HFATTTDLWTSRTSEPYLSLTAHFIDETWQLQSYCLQTSYFPDDHTGDIIAQGLKDALASWSLPEDRMVCMTTDSGANVVSALRI----NNWQRLPCFGHRLHIAIERSMRDPRIDRAIGVCKKMVAAFSSSWKKKKALAD-AQEQLKLPQHKLITESPTRWGSRQRMIERFLEQEKAIRHVLTADKKHRHLVP--TWQDVEVLEAVSKALGPLLEFTDALSGEQLVTVSYLKPVL----SLFNTEVLAVK----SDDTELTKKIKQTILEYLNTKYSEDC------VEELLSLASTLDPRFKNRYNNDGRIKT-----IETAVTAELLAMVTEEDSPTPGPSTAAQATTVEPEAGDASEPAKKTKKSFGSYFKKPQEFRG-----ESLHIAIEKEIQSYLMIPEVDSDVNPLDWWKTQEINFPRLGKLAKKYLCIPASSSPSERAFSTGGNIVTCHRAALKPDAVDRLVFLSHNLK 501
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: A0A6P6NAP0_CARAU (zinc finger BED domain-containing protein 1-like n=7 Tax=Clupeocephala TaxID=186625 RepID=A0A6P6NAP0_CARAU) HSP 1 Score: 126 bits (316), Expect = 2.130e-27 Identity = 132/464 (28.45%), Postives = 210/464 (45.26%), Query Frame = 1
Query: 46 TTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKHGL-EGKVIVITTDCEPSMVKMGRLLKDSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKHEEEDKLAPML--TSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDLHMVLNDAVDDLSELAASNDADIT-AVRTAVIDILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQEAVVEIAVKV--REEKSPTGFSPQAPAAXXXXXXXXXXXQVASARKXRRGGGFMEAFQVTGGLKMYEPGKVGEDENKCYVVYL------DPLDWWRVKRKNVPYLASLARRVLTIP-TQAESKRLFFCAGNVVTKNRNGLCPKIVKLLVLL 1398
T D W+S + Y S+T+ I + L ++ + TGE +A G++ +A L E + ITTD +MV RL N + C HRL VS+A AL R LV H+S S + L + R L + +I + RW M+ R+LE +AI + D+ A L T D +L + L P ++ L G++YV+ S + P LH+ + + +E D D+T +++T V+ L + G ++ L +A LDPR K++Y + + P + ++ +V++A + RE++S T +A Q + R G F + + L + + V E E Y++ DPL WWRV + + P L +AR+ L +P T A S+RLF GN+VT R+ L P V +LV L
Sbjct: 229 TADMWSSRTAEPYQSLTVHFIDEDFNLRARCLQTTYFPDDHTGENIAAGLREGLASWDLHEENHVCITTDNASNMVLAARL----NEWTRLQCFGHRLHLAIENALKDDRVSRATALCRKLVGHFSHSWKKKAALMEAQR-ELKLPEHNLITECPTRWGSKEMMIARVLEQAKAISQVLSGDRYARSLIPTWQDIDVLESIHKALHPLLEFTDALSGEEYVSISYLKPV---LHLFATSVLSEDAE-----DTDLTKSIKTKVLAYLNNKYGDPN----IQELLDVACFLDPRFKIQY-ISTDNIPAIKTRLKTEMVDLAQRTYHREKRSRTETVQMPQSA-----------QPLGEKAKRSLGSFFKTSAASPSLPVED---VAEAELNNYLMTPTIDGEDDPLAWWRVHKISYPQLCIMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAKVNILVFL 660
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Match: UPI001E1DF359 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF359) HSP 1 Score: 124 bits (310), Expect = 5.390e-27 Identity = 128/506 (25.30%), Postives = 214/506 (42.29%), Query Frame = 1
Query: 37 ICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSKSAGTTTGEVVAEGVKAAVAKH----GLEGKVIVITTDCEPSMVKMGRLLKDSNACVHVGCTNHRLENTSSIVFNGSGVSKAMALARGLVKHYSTSSQMANCLAQFVRIYLGSEKKKVIQDVAIRWWPTCSMVRRLLELRRAIIKH-------EEEDKLAPMLTSVDWAILMIVLPILEPFVKTQTQLEGDQYVTGSLVVPFIFDL-HMVLNDAVDDLSELAASND---ADITAVRTAVIDILTYREGSRRKPRGLKPLQVLAIALDPRTKMRYGVEDEEKPKVWKFMQE------AVVEIAVKVREEKS-PTGFS---------PQAPAAXXXXXXXXXXXQVASARKXRR--------------GGGFMEAFQVTGGLKMYEPGKVGEDENKCYVVYLD-PLDWWRVKRKNVPYLASLARRVLTIP-TQAESKRLFFCAGNVVTKNRNGLCPKIVKLLVLLRHSWE 1413
+ ITTDGWTS A ++Y+++T++ I WKLV ++ + T E +AE ++ AV + GL G V + +D +M+K G++L +H+GC H L VS+ +A R +V + S L ++ LG K+ DV RW M+ R LEL+ A++ +DK ++ + + V +L+P + T L + T S+++P F L + +L DDL + AD+T ++L + A+DPR K + D+++ V+ + E AVV VKV+ +KS P + P P A A K G F+ + + +V + +++ V D PL WW+ + P+L+ LA+ +L IP T S+R+F AG+++T R L K V L+ L+ +W+
Sbjct: 30 VAITTDGWTSRATESYVTITVTFINVDWKLVNFVLQTRPLPESHTAENIAEVIEYAVKEWKLPTGLGGTVPPVISDNAANMIKAGKVL---GCTIHIGCLAHTLNLAVQKALKVKSVSQLLARVRSIVSFFHRSCVATAVLKSKAQL-LGLPNHKLKTDVCTRWNSAFEMLNRFLELQAAVVATLTSKEMMHMKDKTLHSISDQNLTLAQEVSVMLKPVKEITTMLCTESLPTVSVIMPLHFKLTNKILQPNEDDLHAIVEMKQIMRADLTQRYLDKTELLN-----------------MTSAIDPRFKQLPYLSDDDRFAVYNHLTEEAIRVSAVVPAVVKVKTKKSEPVTMTKATVSQPPLPSLPTDMLEDQSDEIVCDTAPAIKQESQIVATPKSVLNDILGEVFIARVEAPKSSQELAQMEVIQYKSEPPVSLNDNPLQWWKQRELRFPFLSKLAKCLLCIPATSVPSERVFSTAGDILTAQRASLKAKHVDKLIFLKKNWK 514 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56778.13126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56778.13126.1 >prot_H-elongata_contig56778.13126.1 ID=prot_H-elongata_contig56778.13126.1|Name=mRNA_H-elongata_contig56778.13126.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=471bp MTKIFNLLKGKHICITTDGWTSCANDTYMSVTISLITSSWKLVVISVECSback to top mRNA from alignment at H-elongata_contig56778:1668..3233+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56778.13126.1 ID=mRNA_H-elongata_contig56778.13126.1|Name=mRNA_H-elongata_contig56778.13126.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1566bp|location=Sequence derived from alignment at H-elongata_contig56778:1668..3233+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56778:1668..3233+ >mRNA_H-elongata_contig56778.13126.1 ID=mRNA_H-elongata_contig56778.13126.1|Name=mRNA_H-elongata_contig56778.13126.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2826bp|location=Sequence derived from alignment at H-elongata_contig56778:1668..3233+ (Himanthalia elongata Himel1 dioecious)back to top |