mRNA_H-elongata_contig11670.1312.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: D8LEE1_ECTSI (NADH:ubiquinone oxidoreductase complex I n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE1_ECTSI) HSP 1 Score: 609 bits (1570), Expect = 5.930e-214 Identity = 316/399 (79.20%), Postives = 351/399 (87.97%), Query Frame = 1
Query: 1 AKAASGGRGCTDAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKEAAEGLALDASTPGLYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGEEGSSSEIVDFKGVESAIEAAEAFL-LSDAPRGSTAEAERVLIAPGEE-SGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVKEMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEGISLYRKTRPAFVLVSSASAERYHRLSEEERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGLIPEGQ 1191
AKA SG RGCTDAVLVLGGTGKTG+ VVEALL + R+VVVA+R+KE+A L DASTPGL+VQ GVDVRDEATLK+ +LFDGV+QVVSALGPRFGEEGSSSE VDF+GV+SAIEAAEAFL D + + ERVL+APG+ S E GPGGAWQPLDDVIMGGRSSS W GVG GVLER+SGK FGRWAGTLVTEGGGFCGTV+K+MPFDA G+DG+R+R+RGDG+RYKFRLKP+T+LD T ERQYQA FDTV GEWIEVD+PFESFVAV+RN VDF APRVNEGP+GGKMLSLG+VLSRFGFNEYPNPKY AGAFQLDL ISLY+K RP FVLVSSASAERYHRL+EEERK DIPIVALNPGGILNWKYKAET LR+S L +CVVRATGLI EG+
Sbjct: 84 AKAPSG-RGCTDAVLVLGGTGKTGQKVVEALLKQKRDVVVASRSKESAAEL-YDASTPGLFVQSGVDVRDEATLKNKALFDGVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLEQGDGSSAAPGDQERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWIEVDLPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNEYPNPKYTAGAFQLDLMEISLYKKPRPNFVLVSSASAERYHRLTEEERKNDIPIVALNPGGILNWKYKAETSLRKSSLRHCVVRATGLIAEGK 480
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: A0A836CBF4_9STRA (NADH:ubiquinone oxidoreductase complex I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF4_9STRA) HSP 1 Score: 366 bits (940), Expect = 2.270e-119 Identity = 203/384 (52.86%), Postives = 256/384 (66.67%), Query Frame = 1
Query: 34 DAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTK-EAAEGLALDASTPGLYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGEEGSSSEIVDFKGVESAIEAAEAFLLSDAPRGSTAEAERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVKEMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEGISLYRKTRPAFVLVSSASAERYHRLSEEERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGLIP 1182
DAVLV+G +G+ GR VV+ LLA GR+VV A RT+ + E L A GL+V+ G+DV E ++ F+GV+QVVS LGP F + ++E VD++G + + A E L+ + A A A G E W PLDDVIMGG+SSS W A G + F RW+G LVT+GGGFCGTVVK++ FD AG+DG+RL +RGDG+R+KFRLKP ++ E QYQA+FDTV G W+ ++PF +F AVRRNDV + AP V++GPSG KM S+GIVLSRF +NEY N K K G F LD+ I LYR RPA VLVSSA AER +RL+ EER DIPIV LNP GILNWK+KAET LR S + Y +VRA GL+P
Sbjct: 64 DAVLVIGASGRAGREVVKELLASGRSVVAAGRTQSKITEALGDAAGARGLWVKEGLDVTAEEI--PETFFEGVTQVVSCLGPSFSDPALNAEAVDYRGNAAVLRACERAGLASTAAAAAASAPLCDFASGASLPE------WAPLDDVIMGGKSSSAWDAAAGD--------RDFARWSGELVTDGGGFCGTVVKKLNFDTAGYDGIRLVVRGDGSRFKFRLKP-ADMAQANEYQYQASFDTVDGAWVTAELPFSAFTAVRRNDVIYAAPPVDKGPSGTKMSSIGIVLSRFEYNEYANYKCKPGPFSLDVRAIELYRHARPAVVLVSSAGAERVNRLTAEERAKDIPIVQLNPQGILNWKFKAETALRTSGVPYAIVRAAGLLP 430
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: K8YU42_NANGC (Nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YU42_NANGC) HSP 1 Score: 267 bits (682), Expect = 2.080e-79 Identity = 190/424 (44.81%), Postives = 235/424 (55.42%), Query Frame = 1
Query: 43 LVLGGTGKTGRNVVEALLAEGRNVVVAARTK----EAAEGLALDASTP-----GLYVQI-GVDVRDEATL---KDDSLFDGVSQVVSALGPRFGEE---------GSSSEIVDFKGVESAIEA---AEAFLLSDAPRGSTAEA-------ERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVK--EMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVP--------GEWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEGISLYRKTRPAFVLVSSASAERYHRL-SEEERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGLIPE 1185
+V G TG+ GR +V+ALL EG +VV A R + E AL +TP GL I G+DV + ATL K ++ VV ALGP G + G +SE VDFKGV I+A A+ + A G +A +R L A WQ LDDVIMGG+SSS+ LE K + + G+LV EGGGFCGT + D +GFDGV LR+RGDG+RYK LK L + E YQAAFDT+P G W + IPF F V RN VD+ A + PS +SLG+V SRF FN NP Y GAF L LE I+LYR RP+ VLVSSA AER ++ +EE+RK +IPIV LNPGGILNWKY+AET LR SPL Y ++R GL+PE
Sbjct: 119 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVA----KWQRLDDVIMGGQSSSS---------LELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLAS--ENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQ--PSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPE 525
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: A0A0D2N0U4_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0U4_9CHLO) HSP 1 Score: 259 bits (661), Expect = 2.100e-77 Identity = 181/405 (44.69%), Postives = 231/405 (57.04%), Query Frame = 1
Query: 34 DAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKEAA----------EGLALDASTPG-LYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGE---------EGSSSEIVDFKGVESAIEAAEAFLLSDAPRGSTAEAERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVKEMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVP-GEWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEG-ISLYRKTRPAFVLVSSASAERYHRLSE--EERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGL 1176
+AVLVLG TG+ GR +V+ LL GR VV A RT + A EG + G L+VQ GVDV DE+TL D LF GV+QVVSALG G +G + E V+ KG+ + + A + L AP+ T + VL E EA W+ LDDVIMGG SSS A LE SG W G LV EGGGFCG +++ D + FDG+R+R++GDG +KF +K + D TPE YQA FDT G+W V +P+ SFV V+R D P+ E G + LG+VLSRF FN+ PNP+Y G F+L + G +S YR RP +++SSA ER + + E RK DIPIV LNPGG+LNWK++AE R S Y VVR TGL
Sbjct: 27 NAVLVLGATGRAGRLIVQELLRSGRTVVAAVRTADKASEVFSALELQEGRQAEGKGDGILFVQAGVDVTDESTLTPD-LFAGVTQVVSALGGVTGRLPDGTFGYLDGMTPEAVEAKGMANVVAAMKQHL---APQIRTTQ--EVLPMRTAEDLEA-----WERLDDVIMGGSSSSGLTA------LEDGSGAA---WKGDLVVEGGGFCGARTRKLGLDLSQFDGLRMRVKGDGQTFKFNIKTADQED-TPESTYQATFDTSEEGDWTTVHLPWHSFVPVKRAQSD---PQ-GEPLRGEAISKLGLVLSRFEFNKMPNPRYHPGPFELTIGGGLSAYRDPRPQLLVISSAGVERNAIIGDDAEARKKDIPIVQLNPGGVLNWKFEAECVARASGFPYSVVRCTGL 406
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: A0A7S1SQV2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQV2_9CHLO) HSP 1 Score: 257 bits (656), Expect = 6.670e-76 Identity = 179/417 (42.93%), Postives = 238/417 (57.07%), Query Frame = 1
Query: 1 AKAASGGRGCTDAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKE--------AAEGLALDASTPG---LYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGEE---------GSSSEIVDFKGVESAIEAAEAFLLSDAPRGSTAEAERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLER-RSGKMFGRWAGTLVTEGGGFCGTVVKEMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEG-ISLYRKTRPAFVLVSSASAERYHRLSEEE--RKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGLI 1179
A A+ G+ DAVLV+G GK G V ALLA GR VV A R + A GL A++ G L++ GVD+ TL + LF GV+QVV+A+GPRFG++ GSS VD +GV + + AA+A L S R S AE VL EE + W+PL+DVIMGG+SSS G +L G W+GT++ EGGGFCG + FDG+RLR++G G R+K LK ++D PE YQA F+TV GEW+EV +P+ F V+R D P ++ P+ + +G+V SRF FN PNP + G F+L L+G +S Y+ RP FVLVSSA ER R+ +++ R DIPI+ LNPGGILN KY E LR S L+Y ++R TGL+
Sbjct: 129 AATAAAGKEKRDAVLVVGSAGKLGAEVTAALLAAGRCVVAAGRQSDESALEAALAEAGLKAGAASVGDGYLHLAPGVDISRPETLSRE-LFRGVAQVVAAVGPRFGKQADGSMGFGAGSSPAEVDAEGVAALVAAAQAHLPSVGTRRSAAE---VLSLATEEDVQR-----WRPLNDVIMGGQSSS------GMELLTNGEDGSAV--WSGTVIVEGGGFCGLRTEPADLKLDDFDGIRLRVKGGGQRFKLNLKTEEQMDV-PESTYQACFNTVEGEWVEVFLPWHEFRCVKRASFDPSGPPLD--PT--HVRQVGLVYSRFEFNGLPNPFFTPGEFRLLLDGGVSGYKDPRPEFVLVSSAGVERNARIGDDQEARARDIPILRLNPGGILNAKYDGECALRASRLAYTIIRPTGLV 523
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: A0A250XD45_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XD45_9CHLO) HSP 1 Score: 254 bits (650), Expect = 1.760e-75 Identity = 170/413 (41.16%), Postives = 229/413 (55.45%), Query Frame = 1
Query: 34 DAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKEAA----------EGLALDASTPGLYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGEEGSSSEIVDFKGVESAIEAA-----EAFLLSDAPRGSTAEAERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTW--------LAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVKEMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNDVD-FGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLE-GISLYRKTRPAFVLVSSASAERYHRLSE--EERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGLIPEGQ 1191
+AVLVLG TG+ GR VV LL GR V+ A R+ A EGL D ST L+++ GVDV TL L+ GV+Q+VS LGP FG + + S + +EA A L P+ A E + + E+ AWQ LDDVIMGG+SSS +G + W G L+ EGGGFCG + M D + FDG+ +R++GDG +K +K +L++ PE YQ FDTVPG+W V +P+ +FV+V+ D GAP PS K+ +LG+VLSRF FN+ PNP YK G F+L+++ GIS+Y RP VL+SSA ER + + E+RK DIPIV LNPGG LN+KY+AE +R S Y V+R+TG+I +
Sbjct: 92 NAVLVLGATGRVGRRVVAKLLQSGRTVIAAVRSTGKAKESFGANGLKEGLQED-STGLLFIEGGVDVTSPETLDRAELWKGVTQIVSLLGPSFGPQPNGSMGYNDNMTPERVEAGGWDNLAAILNKHLPKQQRASVEILSMRTSEDLS------AWQRLDDVIMGGQSSSRMELRDTTXXXXXXXXXXXXXXAGAV---WRGDLIVEGGGFCGCRTRPMNLDLSSFDGIHMRVKGDGQIFKMNIKTVDQLNS-PEYTYQTTFDTVPGQWSNVYLPWHNFVSVKMAQHDPEGAPL---DPS--KVATLGLVLSRFEFNKMPNPMYKPGPFELEIQDGISVYADARPQIVLISSAGVERNAIIGDDAEKRKKDIPIVQLNPGGTLNYKYQAEAAVRASGYPYSVIRSTGMIDSNE 488
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: A0A2V0P7E0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7E0_9CHLO) HSP 1 Score: 256 bits (653), Expect = 2.040e-75 Identity = 177/403 (43.92%), Postives = 227/403 (56.33%), Query Frame = 1
Query: 34 DAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKEAAE------GLA---LDASTPGLYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGE---------EGSSSEIVDFKGVESAIEAAEAFLLSDAPRGSTAEAERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVKEMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVP-GEWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEG-ISLYRKTRPAFVLVSSASAERYHRLSE--EERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGL 1176
DAVLVLG TG+ GR +V+ LL +GR VV A R+ + A G+A + S L+V GVDV E TL ++ LF GV+QVVSALG G +G + E V+ KG+ + + AA A ++ A R S E VL E EA W+ LDDVIMGG SSS G E W G L+ EGGGFCG +++ D +GFDG++LR++ DG +K +K + D TPE YQA FDT G+W V +P+ +FV V+R D P+ E +G + LG+VLSRF FN+ PNP Y G F L + G + YR RP VL+SSA ER + + E RK IPIV LNPGG+LNWKY+AE R S YCVVRATGL
Sbjct: 117 DAVLVLGATGRAGRAIVQQLLRDGRTVVAAVRSADKATEVFSSLGVAEGRQEGSGGILFVDAGVDVTKEETLTEE-LFRGVTQVVSALGGVAGRLPDGGFGYLDGMTPEAVEAKGIANVV-AAMARFMAPAKRAS----EVVLSMRTAEDLEA-----WERLDDVIMGGSSSSGLGPAADGGGAE---------WKGDLIVEGGGFCGARTRKLGLDLSGFDGLQLRVKSDGQTFKLNVKTADQED-TPESTYQATFDTAEDGDWSTVRLPWHTFVPVKRAQSD---PQ-GEPLTGDSISKLGLVLSRFEFNKMPNPAYHPGPFTLSIAGGVGAYRAPRPQLVLLSSAGVERNAVIGDDTEARKRSIPIVQLNPGGVLNWKYEAECAARASGFPYCVVRATGL 494
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: E1Z5W0_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5W0_CHLVA) HSP 1 Score: 253 bits (646), Expect = 3.930e-74 Identity = 177/409 (43.28%), Postives = 231/409 (56.48%), Query Frame = 1
Query: 34 DAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKEAAEGL-----ALDASTPG----LYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGE--EGS-------SSEIVDFKGVESAIEAAEAFLLSDAPRGSTAEAERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVKEMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDA-TPERQYQAAFDTVPG-EWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEG-ISLYRKTRPAFVLVSSASAERYHRLS--EEERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGLIPEGQ 1191
DAVLV G TG+ GR VV+ LLA+GR VV A R+ A + ++ PG L+V+ GVD+ + TL +F+GVSQVV+A+G FG EG +SE VD GV + + AA A L A R S E V+ E + WQ LDDVIMGG+SSS G E SG + W G L+ +GGGFCG K P D + +DG+ LR++ DG + F+L TE + PE YQA FDT PG +W V IP+ FV V+R GAP ++ ++ G+V SRF FN +PNP+Y+AG F+L +EG I YR RP ++VSSA ER ++ EE RK DIPIV LNPGG+LN KY E +R S L+Y V+R TGL E +
Sbjct: 102 DAVLVFGATGRMGRTVVQELLAQGRTVVAAVRSPGRARDVFGKAGLVEGRQPGGAGILFVESGVDITNPDTLSP-LMFEGVSQVVTAVGAVFGRTAEGQMGYLDDMTSERVDAAGVAN-VAAAAAACLDPAERRS----EGVVRMRSAEDLQK-----WQRLDDVIMGGKSSS------GLAAAEDGSGAV---WTGELIVDGGGFCGARTKPEPLDLSAYDGIALRVKSDGGQ-TFKLNIKTEAQSEVPEDTYQATFDTNPGGDWTSVFIPWHEFVLVKRARTVPGAPPIDPA----RIRQFGLVYSRFDFNGFPNPRYRAGKFELAIEGGIRAYRDARPQLLMVSSAGVERNAKVGNDEEARKKDIPIVQLNPGGVLNHKYTGEAAVRASGLAYSVLRPTGLTNESE 485
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: A0A4D9DB39_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB39_9STRA) HSP 1 Score: 250 bits (639), Expect = 1.390e-73 Identity = 191/468 (40.81%), Postives = 236/468 (50.43%), Query Frame = 1
Query: 43 LVLGGTGKTGRNVVEALLAEGRNVVVAARTK----EAAEGLALDASTP-----GLYVQI-GVDVRDEATLKDDSL---FDGVSQVVSALGPRFGEE---------GSSSEIVDFKGVESAIEA---AEAFLLSDAPRGSTAEA-------ERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVK--EMPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVP--------GEWIEVDIPFESFVAVRRNDVDFGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEGISLYRKTRPAFVLVSSASAERYHRL-SEEERKGDIPIVALNPGGILNWKYK--------------------------------------------AETRLRRSPLSYCVVRATGLIPE 1185
+V G TG+ GR +V+ALL EG +VV A R + E AL +TP GL I G+DV + ATL ++ S VV ALGP G + G +SE VDFKGV I+A A+ + A G +A +R L A WQ LDDVIMGG+SSS+ LE K + + G+LV EGGGFCGT + P D +GFDGV LR+RGDG+RYK LK L + E YQAAFDT+P G W + IPF F V RN VD+ A + PS +SLG+V SRF FN NP Y GAF L LE I+LYR RP+ VLVSSA AER ++ +EE+RK +IPIV LNPGGILNWKY+ AET LR SPL Y ++R GL+PE
Sbjct: 22 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASLGHGLLDYISGIDVTNAATLSSGNVPAVLKEASHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKQAAGEVEERKRTLFRFETPEDVA----KWQRLDDVIMGGQSSSS---------LELDREKGYATYTGSLVVEGGGFCGTRASGGDAPVDLSGFDGVTLRVRGDGHRYKLNLKTTETLAS--ENVYQAAFDTLPLQDAGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQ--PSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRSVQRDRERKREDGRPDVVCAVESPACAFASVFFNTPLLFSSFPSAETYLRASPLPYIILRPCGLVPE 472
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Match: A0A7S3QMA4_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QMA4_DUNTE) HSP 1 Score: 245 bits (626), Expect = 9.870e-72 Identity = 165/406 (40.64%), Postives = 228/406 (56.16%), Query Frame = 1
Query: 34 DAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKE---AAEGLA-------LDASTPG-LYVQIGVDVRDEATLKDDSLFDGVSQVVSALGPRFGEE---------GSSSEIVDFKGVESAIEAAEAFLLSDAPRGSTAEAERVLIAPGEESGEAGPGGAWQPLDDVIMGGRSSSTWLAGVGRGVLERRSGKMFGRWAGTLVTEGGGFCGTVVKE-MPFDAAGFDGVRLRLRGDGNRYKFRLKPNTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNDVD-FGAPRVNEGPSGGKMLSLGIVLSRFGFNEYPNPKYKAGAFQLDLEG-ISLYRKTRPAFVLVSSASAERYHRLSE--EERKGDIPIVALNPGGILNWKYKAETRLRRSPLSYCVVRATGL 1176
+AVLV+G G+TGR V+ LL GR VV A RT + AAE + + A G L+ + GVDV TL+ L+ GV+QVV+ LG +FG++ G + E V+ GV++ + A + P+ + + + ++ E +GE W +DDVIMGG+SSS W G RW G L+ EGGGFCG K M D + +DG+ LR++GDG +K +K ++D TPE YQA FDTV G+W +V +P+ +FV V+R D GAP PS K++ LG VLSRF FN+ PNP Y+ G FQL ++G I ++ RP V++SSA ER + + E RK IPIV LNPGG LN KY E +R S YCV+R+TG+
Sbjct: 113 NAVLVIGAAGRTGRQAVQQLLQSGRTVVAALRTADKAAAAEAMGSMGIQEGVQAGGKGILFYETGVDVTKPETLRRPELWKGVTQVVTCLGGKFGKQPDGSMGYIDGCTPEAVEALGVQNLVAA----MSEQVPKQTGVQYQAMMP---EAAGEQVA--MWDRMDDVIMGGQSSSLWEPAPDEG-------PHVARWKGDLIVEGGGFCGARTKPLMQTDWSAYDGIALRVKGDGQIFKLNIKTLEQVD-TPESTYQATFDTVDGQWHDVLLPWHNFVPVKRAQSDPDGAPL---DPS--KIVKLGTVLSRFEFNKMPNPMYRPGPFQLLMDGGIRAFKAPRPQIVMISSAGVERNAIVGDDAERRKKQIPIVQLNPGGTLNHKYAGEIAIRSSGYPYCVIRSTGM 496 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11670.1312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11670.1312.1 >prot_H-elongata_contig11670.1312.1 ID=prot_H-elongata_contig11670.1312.1|Name=mRNA_H-elongata_contig11670.1312.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=397bp AKAASGGRGCTDAVLVLGGTGKTGRNVVEALLAEGRNVVVAARTKEAAEGback to top mRNA from alignment at H-elongata_contig11670:313..6116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11670.1312.1 ID=mRNA_H-elongata_contig11670.1312.1|Name=mRNA_H-elongata_contig11670.1312.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5804bp|location=Sequence derived from alignment at H-elongata_contig11670:313..6116- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11670:313..6116- >mRNA_H-elongata_contig11670.1312.1 ID=mRNA_H-elongata_contig11670.1312.1|Name=mRNA_H-elongata_contig11670.1312.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2382bp|location=Sequence derived from alignment at H-elongata_contig11670:313..6116- (Himanthalia elongata Himel1 dioecious)back to top |