prot_H-elongata_contig5663.13108.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5663.13108.1
Unique Nameprot_H-elongata_contig5663.13108.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
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BLAST of mRNA_H-elongata_contig5663.13108.1 vs. uniprot
Match: A0A6H5JI45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI45_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.560e-7
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:    3 DAPRGQLAERTGKMRALGALDIMQVIGTFSDSESIDEAREARELSPRIR 51
            +A  G LA R+GKMRALG LD+MQV+GTFSDSES  +  +  E SPR R
Sbjct: 1828 EARDGLLATRSGKMRALGTLDLMQVVGTFSDSESPSDDIDIEETSPRAR 1876
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5663.13108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI45_9PHAE1.560e-761.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5663contigH-elongata_contig5663:9840..10506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5663.13108.1mRNA_H-elongata_contig5663.13108.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5663 9839..10506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5663.13108.1 ID=prot_H-elongata_contig5663.13108.1|Name=mRNA_H-elongata_contig5663.13108.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
GRDAPRGQLAERTGKMRALGALDIMQVIGTFSDSESIDEAREARELSPRI
RRTMSPRAQALIAEGRPTSPIHVVVPYTDAQTRSRIPNIQAVRASAPVTP
E
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