mRNA_H-elongata_contig56615.13107.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig56615.13107.1
Unique NamemRNA_H-elongata_contig56615.13107.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 2.730e-69
Identity = 134/309 (43.37%), Postives = 189/309 (61.17%), Query Frame = 1
Query:  184 CWIFTHLQKSRGSSVKRVLRKRCPHCRSMIYDNRWWYHSTQAPLNFNNTMERH---NVIMGGYTEALRLQDPTFNICSWFTLFRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSYLQN----TMSEMDTRKASGWYLLKLYLE----------GQSSSNVSAQH----VEEEKLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDLV 1047
            CW+F HLQK  GS+VK +LR R    R  IYD+  W        NF   + R    NV+ GGYTEALR  +P    C +FTLFRHPI+RMVSA+FYC+    D  C +  +  +   D++ FAKHWGNFAVRQF +G +P++ V  Y++      + + D +K +GWY LK+YLE          GQS + ++ +H      E  LY +L+ A D +   +VAVGILE++NT+++LF+ AL +PG+ W  +  + G +  + + +  ES+ L +AWT++ELK YMRLDLLLYEHA+ VF  QA  Y L+
Sbjct:  156 CWVFMHLQKCGGSTVKYMLR-RSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAK-DVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEA-MTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 2.780e-61
Identity = 123/301 (40.86%), Postives = 179/301 (59.47%), Query Frame = 1
Query:  157 TFQQEHNPA-CWIFTHLQKSRGSSVKRVLRKRCPHCRSMIYDNRWWYHSTQAPLNFNNTM---ERHNVIMGGYTEALRLQDPTFNICSWFTLFRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSYLQNTMSEMDTRKASGWYLLKLYLEGQSSSNVSAQHVEEEKLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDLV 1047
            T Q   +P  CW+F HLQK  GS+VK +L  R    R  IYD+  W    +    F   +   ++ NV+ GGYTEALRL +P    C +FTLFRHPI+RMVSA+FYC+    DV C +  M  +   D++ FAKHWGNFA+RQF +G +P+++V  Y      E   ++  G     L      +++  A    +  LY +L+ A D + D +VAVGILE++NT++ LF+  L +P +NW ++  ++G  + +   +  E + L +AWT++ELK YMRLDLLLYEHA+ VF  QA  + L+
Sbjct:  167 TVQSPASPGQCWVFMHLQKCGGSTVKDLLEDRWG-SRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAK-DVDLLTFAKHWGNFALRQFALGFVPSDDVQEYQLKMYLERPQKEDGG----VLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 8.230e-49
Identity = 106/304 (34.87%), Postives = 169/304 (55.59%), Query Frame = 1
Query:  202 LQKSRGSSVKRVLRK--RCPHCRSMIYDNRWWYHSTQAPLNFNNTMERHNVIMGGYTEALR-LQDPTFNICSWFTLFRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQ-SDIIAFAKHWGNFAVRQFVMGLI-PTENVLSYLQNTMSEMDT-----RKASGWYLLKLYLE-------------GQSSSNVSAQHVEEEKLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDL 1044
            + K+ GS+VK +L    +  +    +YD+  W        +F    + ++++ G YTE LR         C WFT+FRHPI R+VSA+FYCKKKP D  C T  +   A  +D+ AFA+HWG+F +RQF +  + P E + + ++   + + T     R   GWY LKLYL+             G   S  +A       +  +L+  Q+ L++ + AVG+LE++ TS+ LFN AL +PG +WP+     G KN++  + +EE+++L ++WT+  L+ Y+ LDLLLY++A+ V   Q + Y L
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLG--DENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAAT--ISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 6.810e-48
Identity = 112/342 (32.75%), Postives = 177/342 (51.75%), Query Frame = 1
Query:   79 LHGSGHSEVTGLPKNYEHPSFGLTTPTFQQEHNPA----CWIFTHLQKSRGSSVKRVLRKRCPHCRSMIYDNRWWYHSTQAPLNFNNTMERH---NVIMGGYTEALRLQDPTFNI------CSWFTLFRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSYLQNT-------MSEMDTRKASGWYLLKLYLEGQSSSNVSAQHVEEEKLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDL 1044
            L+G  H+ V  LP+           P    E +P     CWIF HLQK+ G++VKR+L        S  YD+  W        +   ++      +   GGY EALR + P F        C WFT+FRHP+SR+VSA++YC++ PSD  C +  +      D++ FA+HWGNFA+RQF +G +  + V  +L +        ++        GWY+LKL+L  +S         E  +L  M +   D L D +  VGILE++N ++ LF++AL +PG+ W +E  ++G  N +  ++ E+  +L +A ++ E+  ++ LDL LY  A+ +F  Q   Y +
Sbjct:   51 LYGGHHAHV--LPRPDAAEKSPQDAPALNIEDSPRSENRCWIFNHLQKAGGTTVKRLLFDSWG-SESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALR-RTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSR-NVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGV-ADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.920e-45
Identity = 103/294 (35.03%), Postives = 162/294 (55.10%), Query Frame = 1
Query:  184 CWIFTHLQKSRGSSVKRVLRKRCPH--CRSMIYDNRWWYHSTQAPLNFNNTMERHNVIM--GGYTEALRLQDPTFNICSWFTLFRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSYLQNTMSEMDTRKASG--------WYLLKLYLEGQSSSNVSAQHVEEEKLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAE-DEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQ 1026
            CW+F+H+ KS G +V++++          + ++D+  W     +  ++  T  + N +   GGYTE LR+ D     C WFT+FRHP+SR+VSA+FYC++   D  C    +   ++ D++ FA+HWGN+ +RQF +  I  E+V  +    +SE   ++A G        WY  K YL      +       E  L   L  AQ++LS R+ AVGI+EE++ SM LFN  L L   +W +E  K+G KN+   +++      L  AW + ELK ++ LD+LLY+HA+ V +SQ
Sbjct:   52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEW----SSGRSYAETFVKENAVFTYGGYTEGLRMYDD--RDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDA-SKVDLLTFAEHWGNYGLRQFALASIKAEDV--FHNEVVSEF-CQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQ 335          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.390e-44
Identity = 115/340 (33.82%), Postives = 171/340 (50.29%), Query Frame = 1
Query:   67 WVSWLHGSGHS-EVTGLPKNYEHPSFGLTTPTFQQEHNPACWIFTHLQKSRGSSVKRVLRKRCPHCRSMIYDNRWWYHSTQAPLNFNNTME----RHNVIMGGYTEALRLQDPTFNICSWFTLFRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSYLQNTMSEMDTRKASGWYLLKLYLEGQ--------SSSNVSAQHVEEEKLYP-MLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDL 1044
            WV W    G   E+       + P   L+ P        ACW++T + K+ G+S++R+++       + + +    +  TQ         +    R ++I G YTE LR        C WFT+ RHPI+R+VSAF YC   PSD  C TR   PE   DI  FA+HWGN  V QF +      ++L      ++E+   K+  WY  KLY EG+        +S+N+S + V +    P +L+  ++ L  ++ AVGILE++ TSM LF+ AL+LPG NW      +  +N  D     ++ LL  + T+  LK  + LD+LLYEHA  V K+Q   Y L
Sbjct:    5 WVCWPLALGALLELAAANVGSDSPELSLSPP--------ACWVYTDMNKAGGTSIRRMIKDYAAATNTTVGE----FTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLG-CKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPE-DGDIYDFAEHWGNHGVVQFALAFEDLNDIL------VTEV---KSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDS--KAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 6.680e-43
Identity = 106/315 (33.65%), Postives = 160/315 (50.79%), Query Frame = 1
Query:  133 PSFGLTTPTFQQEHNPACWIFTHLQKSRGSSVKRVLRKRCPHCRSMIY--DNRWWYHSTQAPLNFNNTMERHNVIMGGYTEALRLQDPTFNICSWFTLFRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSYLQNTMSEMDTRKASGWYLLKLYLEGQ-------SSSNVSAQHVEEEKLY--PMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDL 1044
            P   L+TPT        CW+FTH  K+ G++VK  LR         +    + W+    +   +  N  ++  +I GGY E LR     F  C WFT+ RHPI+R++SAF+YC     D  C      PE   DI  FAKHWGN+A+ QF +G++    + +       E+D   A  W+  KLY EG+       S++     H E + ++   +L+  ++ L   + AVGILE +  SM LF+ AL +PG NW         + ++++   E+  +LA A T+  L+ Y+ LDLLLYE+A  + + Q   YDL
Sbjct:   28 PELSLSTPT--------CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLN--DKPVLIAGGYAEGLRTS--AFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPE-DGDIYDFAKHWGNYALLQFALGVVDQHEIFA------EEVD---APAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIV-EKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 4.670e-30
Identity = 74/215 (34.42%), Postives = 111/215 (51.63%), Query Frame = 1
Query:  421 FRHPISRMVSAFFYCKKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSYLQNTMSEMDTRKASGWYLLKLYLEGQSSSNVSAQHVEEE------KLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDLV 1047
            ++ PI R+VSA+FYCK+   D  C +  +     +D+  FAKHWGN+ +RQF +  +  E+V +  Q    +       GWY +K Y E Q         ++E        +  +L+  +D LS  + AVGILE++ TSM LFN AL++P  NW       G KN +     EE+  L  AW +  L   + LD+ LY+HA+ V   Q E + +V
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKA-GNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 5.980e-16
Identity = 84/298 (28.19%), Postives = 128/298 (42.95%), Query Frame = 1
Query:  184 CWIFTHLQKSRGSSVKRVLRKRC-----PHCRSMIYDNRWWYHSTQAPLNFNNTMERHNVIMGGYTEALRLQDPTFNI---CSWFTLFRHPISRMVSAFFYCKKKPSD--------VCCGTRNMPPEAQSDIIAFAK-HWGNFAVRQFVMGLIPTENVLSYLQNTMSEMDTRKASGWYLLKLYLEGQSSSNVSAQHVEEEKLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQ 1026
            C +F H+ KS GS++K  L         P   S +       +S +   N        + ++ GY E +R   P   +   C +FTL RHP+ R+VSAFFYC   P+D          CG  + P  A   ++ FA+ HW N A +Q   G+     ++       +E++T                      A  ++E     +L+  +D LS  + AVGI+E ++ SM LFNA +R P  +W   M          E + E   +L  A  +  +   M  DLLLY  A+ +FK Q
Sbjct:   41 CTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFN-------SSAVIMGYAELMRQDGPLEAVRRDCEYFTLLRHPVDRLVSAFFYC---PTDHDLQLRPPKWCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLIC----EATEVET----------------------APGLDEPHGLDVLQKVEDILSG-YTAVGIMEHWDLSMQLFNARVRSPVRDW--NMTVRSNAGLPSELRDE---VLQWAHDSPVIHRLMATDLLLYSFALSIFKRQ 296          
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Match: D7G5K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K0_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 3.520e-14
Identity = 82/299 (27.42%), Postives = 130/299 (43.48%), Query Frame = 1
Query:  184 CWIFTHLQKSRGSSVKRVLRKRCPH---CRSMIYDNRWWYHSTQAPLNFNNTMERHNVIMGGYTEALRLQ-DPTFNICSWFTLFRHPISRMVSAFFYCKKKPSD--------VCCGTRNMPPEAQSDIIAFAKH-WGNFAVRQFVMGLIPTENVLSYLQNTMSEMDTRKASGWYLLKLYLEGQSSSNVSAQHVEEEKLYPMLKHAQDSLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEM-----VKTGIKNAEDEYQHEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQ 1026
            C +F H+ KS GS+VK +L +   +    R  +  N   +  T A L   N+    + I+ GY E +R   +     C +FT+ RHPI R+VSAFFYC   P+D          CG    P  A   ++ FA+  W N A +Q   GL    +                               +   S Q ++E  +  +L+  Q++L+  + AVGI+E ++ SM LFNA +R P   W         V +G+++   ++ HE          +  +   +  D+LLY  A+ +FK Q
Sbjct:  147 CTVFHHMVKSAGSTVKSLLHRATRNEGLPRPAVCIN--GHARTDACLEAINS----SAIITGYAELIRYPLEVNRRECDYFTMLRHPIDRLVSAFFYC---PTDHDVQLRPRKWCGHAEHPVPATERLLDFAQESWQNKAFKQMTFGLYCPPDTFC--------------------------DEAEVESPQMLDEPGMLDILQQVQNTLAG-YTAVGIMEHWDLSMQLFNARVRSPVREWNMFKQRNPGVMSGLRDEVLQWAHE----------SPAIHRVIGTDMLLYYFALSIFKQQ 399          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56615.13107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FWQ3_ECTSI2.730e-6943.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI2.780e-6140.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FS84_ECTSI8.230e-4934.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G715_ECTSI6.810e-4832.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY77_9PHAE1.920e-4535.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE1.390e-4433.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE6.680e-4333.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L061_9PHAE4.670e-3034.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT23_9PHAE5.980e-1628.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5K0_ECTSI3.520e-1427.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56615contigH-elongata_contig56615:2..2372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score247.7
Seed ortholog evalue8.1e-63
Seed eggNOG ortholog2880.D7FWQ3
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-10_002960.1
Exons2
Model size2249
Cds size1035
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56615.13107.1prot_H-elongata_contig56615.13107.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig56615 1323..2357 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930920.6618872-UTR-H-elongata_contig56615:1..10401622930920.6618872-UTR-H-elongata_contig56615:1..1040Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56615 2..1040 -
1691679625.3059323-UTR-H-elongata_contig56615:1..10401691679625.3059323-UTR-H-elongata_contig56615:1..1040Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56615 2..1040 -
1622930920.681647-UTR-H-elongata_contig56615:1162..13221622930920.681647-UTR-H-elongata_contig56615:1162..1322Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56615 1163..1322 -
1691679625.3193643-UTR-H-elongata_contig56615:1162..13221691679625.3193643-UTR-H-elongata_contig56615:1162..1322Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56615 1163..1322 -
1622930920.716012-UTR-H-elongata_contig56615:2357..23721622930920.716012-UTR-H-elongata_contig56615:2357..2372Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56615 2358..2372 -
1691679625.355231-UTR-H-elongata_contig56615:2357..23721691679625.355231-UTR-H-elongata_contig56615:2357..2372Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig56615 2358..2372 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930920.6932516-CDS-H-elongata_contig56615:1322..23571622930920.6932516-CDS-H-elongata_contig56615:1322..2357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56615 1323..2357 -
1691679625.3373907-CDS-H-elongata_contig56615:1322..23571691679625.3373907-CDS-H-elongata_contig56615:1322..2357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig56615 1323..2357 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig56615.13107.1

>prot_H-elongata_contig56615.13107.1 ID=prot_H-elongata_contig56615.13107.1|Name=mRNA_H-elongata_contig56615.13107.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
MRASSSHWLTLLLEVMLWVSWLHGSGHSEVTGLPKNYEHPSFGLTTPTFQ
QEHNPACWIFTHLQKSRGSSVKRVLRKRCPHCRSMIYDNRWWYHSTQAPL
NFNNTMERHNVIMGGYTEALRLQDPTFNICSWFTLFRHPISRMVSAFFYC
KKKPSDVCCGTRNMPPEAQSDIIAFAKHWGNFAVRQFVMGLIPTENVLSY
LQNTMSEMDTRKASGWYLLKLYLEGQSSSNVSAQHVEEEKLYPMLKHAQD
SLSDRFVAVGILEEFNTSMYLFNAALRLPGINWPQEMVKTGIKNAEDEYQ
HEESQLLAKAWTNTELKSYMRLDLLLYEHAMGVFKSQAEYYDLV*
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mRNA from alignment at H-elongata_contig56615:2..2372-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig56615.13107.1 ID=mRNA_H-elongata_contig56615.13107.1|Name=mRNA_H-elongata_contig56615.13107.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2371bp|location=Sequence derived from alignment at H-elongata_contig56615:2..2372- (Himanthalia elongata Himel1 dioecious)
AAAAGGTCGCTTAATATGAGAGCATCATCATCGCATTGGTTAACGCTGCT GCTGGAGGTGATGTTATGGGTTTCCTGGCTACACGGGTCTGGACATTCTG AAGTAACCGGCCTGCCCAAAAATTACGAACATCCAAGCTTCGGACTGACA ACTCCAACATTTCAACAGGAACACAATCCTGCCTGCTGGATTTTTACGCA CCTGCAAAAGAGTCGAGGGTCCTCTGTAAAACGGGTGCTACGTAAAAGAT GCCCCCATTGCAGGTCAATGATATACGACAATCGGTGGTGGTATCACAGC ACCCAGGCCCCTTTGAATTTTAATAATACAATGGAGAGACATAACGTGAT AATGGGAGGCTACACCGAAGCTTTAAGGCTCCAGGACCCGACTTTCAATA TTTGTTCTTGGTTCACATTGTTCAGGCATCCAATATCCAGGATGGTATCC GCATTTTTCTACTGCAAGAAAAAACCAAGCGATGTATGCTGTGGAACACG CAATATGCCGCCTGAGGCACAAAGCGATATAATAGCTTTTGCTAAACATT GGGGGAACTTTGCAGTACGCCAGTTCGTGATGGGATTAATTCCTACAGAA AACGTCTTATCTTACCTCCAAAATACCATGAGCGAGATGGACACAAGAAA AGCTTCTGGGTGGTATTTGCTAAAACTTTACCTCGAAGGCCAATCGAGTA GTAATGTTTCGGCTCAGCACGTAGAAGAAGAAAAATTGTACCCGATGCTA AAACATGCTCAGGATTCACTCAGCGATCGTTTTGTCGCTGTTGGTATTCT TGAGGAATTCAACACCTCGATGTATTTATTCAATGCCGCTCTACGTCTCC CTGGCATTAATTGGCCTCAAGAAATGGTTAAGACTGGAATCAAGAACGCG GAAGATGAGTACCAACATGAAGAGAGTCAACTCCTCGCCAAAGCTTGGAC AAACACCGAGTTAAAGAGTTACATGCGTCTTGATTTACTCCTCTACGAGC ACGCTATGGGTGTTTTTAAAAGTCAGGCTGAGTACTACGACCTAGTCTAA AAGGAGCTACGCGAGTCAAGTATGGCTTGTTGTGCTAGCTATGATCTGAC GAGAGTGGTCTTGCGCTTGTTATCAGTATGTTTAGGGCCGAGCACAACCA AAATGGTTTTTGCCACTTCACCCTATCGCGGTGGGTTGGAGGGGGGGGGG GTATTCGACAGTGGCATGGATGGTTCTACATTTCATGAAGTATATGAGGC GCTAAGGTTGGAACTATTCATGACGAAAGCATAAGTGCTTTGTCTAATCT GTGCACGAGCTTATATTCAATACGATATCCAGCAACTGGTTCGCAACGTT TAATATGTGTTTAACGGGGAAGCGATAAAAAGACTTAGTCGTCAACCAGA GATGGATGGATCAATATCTTAGGACCGCAGACGGGATAGGAAGCATTGGG GTTGGTAGGATTGGTAACCTAGTACGTGGAATATGCCCATTAGTAAGCAA CATATATATATATATATATATATGATCTCTATTTATACCTGTAAACGCGC ACTATATCGTACAATATAGTATAACGGCCATCAATATCAGATCGTGTCAT CAAAGATGAATTTGGTGATTTGCTATGTAATTTGGATTCTACGGTAGGTT TTCGTGCTTCGTACAACGTTGAAATTATGACAGCGAGATGCTTGAGGTGA AAATATAAGCATTGCCTGGCTCTAGCTTGGGATCTGACAGCACTTCAGAC AGTGATGCAGCTTTCTTTATGTTGACTATTCTTCTCGGCTTCCAGCTGTT ACGTGGTTTGGTCCCACATCAGTTAGTTAGTTGCCTGTATGTGGGTCTAA GCAGCACTTTAGTTATTACTTGCTATAGCCCTTGAACATGTGAAAGCATG TTAGTCGTAAGCTGTAGTTAGATGCCGCTCTAGCTATCGTGATTTTTCGT TTGAGGCTGAGGCTGGTTGTTGGTTGGTATATTCCGTACGTTGTGTGTAT GGATGCGCAATGTGGGATCATCCGTGTGTGATCTTCTGTACCTTGTTTGA GACCACGAGCCGGATCGGTGTGGAGGAGACCGGTCGGCTGTTAGTGAATC ATCAATCAATCAATAAACCAATAGTTAGTTGGTGAAAAATAACATACTGT ATATGATATATGTTCTGCATCACCAATCAATATTTAGTGACAGTATATCA TCGATACCGAGATGATTTCGCTCGGTGATCAAAAGGGAATTAAAGGACCT AGGTTTACAAGCTACGATGGGTCGGGTAGTATTCATATACGTACATACTG CCGGTCGCCCCGGTGGTGTAAGGGTCAAGCCGTCTTCCTTGATCCCCGGA AGTAGTGAGTTCGAATCCTGG
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Coding sequence (CDS) from alignment at H-elongata_contig56615:2..2372-

>mRNA_H-elongata_contig56615.13107.1 ID=mRNA_H-elongata_contig56615.13107.1|Name=mRNA_H-elongata_contig56615.13107.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2070bp|location=Sequence derived from alignment at H-elongata_contig56615:2..2372- (Himanthalia elongata Himel1 dioecious)
ATGAGAGCATCATCATCGCATTGGTTAACGCTGCTGCTGGAGGTGATGTT
ATGGGTTTCCTGGCTACACGGGTCTGGACATTCTGAAGTAACCGGCCTGC
CCAAAAATTACGAACATCCAAGCTTCGGACTGACAACTCCAACATTTCAA
CAGGAACACAATCCTGCCTGCTGGATTTTTACGCACCTGCAAAAGAGTCG
AGGGTCCTCTGTAAAACGGGTGCTACGTAAAAGATGCCCCCATTGCAGGT
CAATGATATACGACAATCGGTGGTGGTATCACAGCACCCAGGCCCCTTTG
AATTTTAATAATACAATGGAGAGACATAACGTGATAATGGGAGGCTACAC
CGAAGCTTTAAGGCTCCAGGACCCGACTTTCAATATTTGTTCTTGGTTCA
CATTGTTCAGGCATCCAATATCCAGGATGGTATCCGCATTTTTCTACTGC
AAGAAAAAACCAAGCGATGTATGCTGTGGAACACGCAATATGCCGCCTGA
GGCACAAAGCGATATAATAGCTTTTGCTAAACATTGGGGGAACTTTGCAG
TACGCCAGTTCGTGATGGGATTAATTCCTACAGAAAACGTCTTATCTTAC
CTCCAAAATACCATGAGCGAGATGGACACAAGAAAAGCTTCTGGGTGGTA
TTTGCTAAAACTTTACCTCGAAGGCCAATCGAGTAGTAATGTTTCGGCTC
AGCACGTAGAAGAAGAAAAATTGTACCCGATGCTAAAACATGCTCAGGAT
TCACTCAGCGATCGTTTTGTCGCTGTTGGTATTCTTGAGGAATTCAACAC
CTCGATGTATTTATTCAATGCCGCTCTACGTCTCCCTGGCATTAATTGGC
CTCAAGAAATGGTTAAGACTGGAATCAAGAACGCGGAAGATGAGTACCAA
CATGAAGAGAGTCAACTCCTCGCCAAAGCTTGGACAAACACCGAGTTAAA
GAGTTACATGCGTCTTGATTTACTCCTCTACGAGCACGCTATGGGTGTTT
TTAAAAGTCAGGCTGAGTACTACGACCTAGTCTAAATGAGAGCATCATCA
TCGCATTGGTTAACGCTGCTGCTGGAGGTGATGTTATGGGTTTCCTGGCT
ACACGGGTCTGGACATTCTGAAGTAACCGGCCTGCCCAAAAATTACGAAC
ATCCAAGCTTCGGACTGACAACTCCAACATTTCAACAGGAACACAATCCT
GCCTGCTGGATTTTTACGCACCTGCAAAAGAGTCGAGGGTCCTCTGTAAA
ACGGGTGCTACGTAAAAGATGCCCCCATTGCAGGTCAATGATATACGACA
ATCGGTGGTGGTATCACAGCACCCAGGCCCCTTTGAATTTTAATAATACA
ATGGAGAGACATAACGTGATAATGGGAGGCTACACCGAAGCTTTAAGGCT
CCAGGACCCGACTTTCAATATTTGTTCTTGGTTCACATTGTTCAGGCATC
CAATATCCAGGATGGTATCCGCATTTTTCTACTGCAAGAAAAAACCAAGC
GATGTATGCTGTGGAACACGCAATATGCCGCCTGAGGCACAAAGCGATAT
AATAGCTTTTGCTAAACATTGGGGGAACTTTGCAGTACGCCAGTTCGTGA
TGGGATTAATTCCTACAGAAAACGTCTTATCTTACCTCCAAAATACCATG
AGCGAGATGGACACAAGAAAAGCTTCTGGGTGGTATTTGCTAAAACTTTA
CCTCGAAGGCCAATCGAGTAGTAATGTTTCGGCTCAGCACGTAGAAGAAG
AAAAATTGTACCCGATGCTAAAACATGCTCAGGATTCACTCAGCGATCGT
TTTGTCGCTGTTGGTATTCTTGAGGAATTCAACACCTCGATGTATTTATT
CAATGCCGCTCTACGTCTCCCTGGCATTAATTGGCCTCAAGAAATGGTTA
AGACTGGAATCAAGAACGCGGAAGATGAGTACCAACATGAAGAGAGTCAA
CTCCTCGCCAAAGCTTGGACAAACACCGAGTTAAAGAGTTACATGCGTCT
TGATTTACTCCTCTACGAGCACGCTATGGGTGTTTTTAAAAGTCAGGCTG
AGTACTACGACCTAGTCTAA
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