prot_H-elongata_contig11669.1310.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11669.1310.1
Unique Nameprot_H-elongata_contig11669.1310.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length176
Homology
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: D7G0Z3_ECTSI (Putative: beta-tubulin folding cofactor E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z3_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.190e-84
Identity = 131/176 (74.43%), Postives = 153/176 (86.93%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVEKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEALRKQYVDVDAPLVAPENLLPDAYASTARGGKKAIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMKKSERVPPSIA 176
            GVEFDDP RGKHDG+VEKPDG   RYF+CV GGSGSFLKPGKFSTG+S+ EALR+QYVD++APL+APENLLPDAYAST++GGKKAIEF+GE  IR+ QQVDTLDHCTLRE +IS AG L  L+EAAGAFV+VDLKANLLSDW +VGLIASQ  L+E+LS+G N  K  + VPPS++
Sbjct:   47 GVEFDDPARGKHDGAVEKPDGSSLRYFTCVNGGSGSFLKPGKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGESKIRRRQQVDTLDHCTLRECSISKAGELPALAEAAGAFVNVDLKANLLSDWQEVGLIASQTKLLEILSVGSNMFKTPDGVPPSLS 222          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A6H5L3Q3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q3_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 6.250e-80
Identity = 132/204 (64.71%), Postives = 152/204 (74.51%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVEKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEALRKQYVDVDAPLVAPENLLPDAYASTARGGKK----------------------------AIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMKKSERVPPSIA 176
            GVEFDDP RGKHDG+VEKPDG   RYF+CV GGSGSFLKP KFSTG+S+ EALR+QYVD++APL+APENLLPDAYAST++GGKK                            AIEF+GE  IR+ QQVDTLDHCTLRE +IS AG L  L+EAAGAFV VDLKANLLSDW +VGLIASQ PL+E+LS+G N  K  E VPPS++
Sbjct:   47 GVEFDDPARGKHDGAVEKPDGSSVRYFTCVNGGSGSFLKPSKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKVQTCMPLGKCATPFRRKRDLCPMSSADQAIEFYGESKIRQRQQVDTLDHCTLRECSISKAGELPALAEAAGAFVSVDLKANLLSDWQEVGLIASQTPLLEILSVGSNMFKTPEGVPPSLS 250          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A4D9DAF6_9STRA (CAP-Gly domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAF6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 6.970e-43
Identity = 86/171 (50.29%), Postives = 111/171 (64.91%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVEKPDGLIERYFSCVFGGS--GSFLKPGKFSTGVSVVEALRKQYVDVDAPLVAPENLLPDAYASTARGGKKAIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMKKSE 169
            GVE+DDPGRGKHDGSV    G I R+FSC+  G    SFLKP K   GVS++  L K+YV  DAPL AP  +  +AYA+T+RGG+K IEFHGE  IR  QQ+  L+  +LR   ++ AG   E+ E A   V+VDL+ NL SDW ++G +A Q+P +E L L  N M+  E
Sbjct:   44 GVEWDDPGRGKHDGSVLTAAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVAPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGE-EEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLE 213          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A7S3HIA2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIA2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.410e-30
Identity = 70/167 (41.92%), Postives = 100/167 (59.88%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVEKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEALRKQYVDVDAPLVAP-ENLLPDAYASTARGGKKAIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMK 166
            GVE+D+P RGKHDGS     G + RYF CV G SGSF+KP K + G + + AL  +YV++DAP +A  +  +P+ + ST RG +K IEF GED IRK QQV  +    +R   +S+    A   +      ++DL+ NLL +W +V  + S  P + VL L  N+M+
Sbjct:   47 GVEWDNPTRGKHDGSSVDSSGKLHRYFECVHG-SGSFIKPTKVAYGRTFLAALNDRYVNLDAPTIAEADGTVPNVFVSTLRGNQKTIEFVGEDKIRKRQQVANVTSVAIRSDTVSSIEVTA--GDVISHLQEIDLQDNLLWNWTEVATLGSVAPNISVLLLHNNKMQ 210          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A448Z797_9STRA (CAP-Gly domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z797_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.440e-28
Identity = 72/173 (41.62%), Postives = 105/173 (60.69%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVE-KPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVV-EALRKQYVDVDAPLVAPENLLPDAYASTARGGKKAIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGA-----FVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMK 166
            G+ +DD  RGKHDGSV  +    I R+FSC     GSFL+P K   G+++  + LR++YV+++AP++AP N+LP + A+T+ G +K IEF GE  IRKHQQ+  +D  +LR   I+ A +    S+  G        D+DL  NLLS+W +   I  Q PL+E  SL  N ++
Sbjct:   50 GIVWDDTSRGKHDGSVVCRRTNKIVRHFSCG-PTQGSFLRPKKIDFGIALTAKLLREKYVEMNAPVIAPNNILPHS-ATTSSGREKTIEFLGELQIRKHQQLQNIDKISLRREGIARACNENSDSDGGGMSDFRHIRDIDLAGNLLSNWDETVKIMRQFPLLETFSLAHNSIR 220          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A7S3ZSI4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSI4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.810e-27
Identity = 80/197 (40.61%), Postives = 106/197 (53.81%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVEKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEALRKQYVDVDAPLVAP-------------------------ENLLPDAY---ASTARGGKKAIEFHGEDNIRKHQQVD--TLDHCTLREANISAAGHLAELS-EAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMK 166
            GVE+DD  RGKHDG+VEK    I RYF+C   G+GSF+KP K   G S+VEALR++YV +DAP+ AP                         E +    +   A T RG  KAI+F GE N+RK QQ+D   +D   LR A +S  G L + S E   +   +DL+ NLL+ W  VG I    P +  L + GNR++
Sbjct:   49 GVEWDDATRGKHDGAVEKDSQEI-RYFTCP-AGAGSFVKPKKVDRGSSLVEALRQKYVGLDAPVEAPLGVDKNEADSRDFLKGSTEQTKRNGEEITRGTFEHKAYTKRGNTKAIQFCGELNVRKEQQLDDGVVDRVVLRCAGVSRLGSLDQASTEHLASLTILDLQCNLLAAWTDVGDIVKACPNLTSLDVSGNRLQ 243          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A7S2GRA7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GRA7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 7.610e-26
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGS-VEKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEALRKQYVDVDAP--LVAPENLLPDAYAS--TARGGKKAIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGN 163
            GVE+DD GRGKHDGS V K  G+   +F C  G +GSFLKP K   G +    L+++YV +D+   LV  +N       S  T++G +  +EFHGE  IRK QQ + LD  T+R+  I+ AG   +  +AA +   +D++ NLLSDW ++  +A Q+  +  L L GN
Sbjct:   52 GVEWDDVGRGKHDGSAVNKDTGVRVYHFRCAEG-AGSFLKPKKLRRGETFSTVLKRRYVALDSAQRLVDEDNRFDMDVCSVQTSKGRQLPVEFHGELKIRKQQQAEDLDRMTVRDEMIALAGD--DALDAAPSLASLDMQGNLLSDWTEIAALAKQLTSLTDLRLSGN 216          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A1E7FAE4_9STRA (L domain-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAE4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.480e-23
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVE-KPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEAL-RKQYVDVDAPLVAPENLLPDAYASTARGGKKAIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMK 166
            G+ +DD  RGKHDGSV  +    I R+F+C     GSFL+  K   GV++   L R +YV ++AP++AP NLLP + A T+ G +K+IEF GE  IRKHQQ++ +   +LR   IS      +         ++DL  NL  DW QV  I  +   +E+ SL  N ++
Sbjct:   54 GIVWDDHSRGKHDGSVICRKTNQIVRHFACG-PTQGSFLRLRKLDLGVTLTTTLLRDKYVKMNAPIIAPNNLLPHS-AKTSSGREKSIEFLGELQIRKHQQLENIVKISLRREGISKVSDDDDDMAEFQHIKEIDLAGNLFCDWEQVFKIIHKFSCLEIFSLAHNYIR 219          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A851NYD1_9GALL (Tubulin-specific chaperone E (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851NYD1_9GALL)

HSP 1 Score: 103 bits (257), Expect = 1.390e-22
Identity = 70/178 (39.33%), Postives = 95/178 (53.37%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSVEKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEALRKQYVDVDAPLVAPENLLPDAYASTARGGKKAIEFHGEDNI-RKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRMK-KSERVPPSIA 176
            GVE+DDP RGKHDG+ E       +YF C     GSF++P K + GV  + A++ +Y   D      +N   D +      GKK +EF G D I  K +Q+  L H ++RE  +S AG   E+S        +DL  NL+S W  V  IASQ+P +E L + GN+MK  S  VP S A
Sbjct:   38 GVEWDDPQRGKHDGTYEGT-----QYFKCRHPRGGSFIRPSKANFGVDFLTAVKDRYGLNDKQ--DRQNGTEDTHVI----GKKTVEFVGRDFIAEKQRQLHQLVHVSVRECAVSHAGQKEEISRTCANIRCIDLSKNLISCWDTVTDIASQVPDLETLDISGNKMKFPSTSVPESSA 204          
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Match: A0A2R5H1J9_9STRA (Tubulin-specific chaperone E n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H1J9_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.500e-22
Identity = 69/166 (41.57%), Postives = 90/166 (54.22%), Query Frame = 0
Query:    1 GVEFDDPGRGKHDGSV-EKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVVEALRKQYVDVDAPLVAPENLLPDAYASTARGGKKAIEFHGEDNIRKHQQVDTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIASQIPLMEVLSLGGNRM 165
            GVE+ D GRGKHDGSV EK  G   RYFSC  G  GSF+KP     GV+  +AL  +Y + +A +   E +  +A      G    IE  G D IR  QQ+  L   +L    + +AG    +SE      ++DL  NL+  W  VGLIASQ+P +E LSL  NR+
Sbjct:   40 GVEWADAGRGKHDGSVKEKTTGEETRYFSCPQG-QGSFVKPQFLRVGVAFEDALMARY-EPEAAVRVGEGVEGEAGPRRRNGEAVEIEAVGMDQIRGKQQIHKLREVSLSSCVVVSAGQPGWISEHCPHIKELDLADNLIDSWKTVGLIASQLPGLEHLSLARNRL 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11669.1310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Z3_ECTSI1.190e-8474.43Putative: beta-tubulin folding cofactor E n=1 Tax=... [more]
A0A6H5L3Q3_9PHAE6.250e-8064.71CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
A0A4D9DAF6_9STRA6.970e-4350.29CAP-Gly domain-containing protein n=2 Tax=Monodops... [more]
A0A7S3HIA2_9STRA1.410e-3041.92Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A448Z797_9STRA2.440e-2841.62CAP-Gly domain-containing protein n=1 Tax=Pseudo-n... [more]
A0A7S3ZSI4_9STRA1.810e-2740.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2GRA7_9STRA7.610e-2641.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1E7FAE4_9STRA3.480e-2339.29L domain-like protein n=1 Tax=Fragilariopsis cylin... [more]
A0A851NYD1_9GALL1.390e-2239.33Tubulin-specific chaperone E (Fragment) n=1 Tax=Pe... [more]
A0A2R5H1J9_9STRA2.500e-2241.57Tubulin-specific chaperone E n=1 Tax=Hondaea ferme... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036859CAP Gly-rich domain superfamilyGENE3D2.30.30.190coord: 1..53
e-value: 4.5E-6
score: 28.1
IPR036859CAP Gly-rich domain superfamilySUPERFAMILY74924Cap-Gly domaincoord: 1..98
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 1..42
e-value: 4.8E-6
score: 26.5
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 1..39
score: 8.942
NoneNo IPR availablePANTHERPTHR15140TUBULIN-SPECIFIC CHAPERONE Ecoord: 1..167
NoneNo IPR availablePANTHERPTHR15140:SF6TUBULIN-SPECIFIC CHAPERONE Ecoord: 1..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11669contigH-elongata_contig11669:1636..8391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11669.1310.1mRNA_H-elongata_contig11669.1310.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11669 1636..8391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11669.1310.1 ID=prot_H-elongata_contig11669.1310.1|Name=mRNA_H-elongata_contig11669.1310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
GVEFDDPGRGKHDGSVEKPDGLIERYFSCVFGGSGSFLKPGKFSTGVSVV
EALRKQYVDVDAPLVAPENLLPDAYASTARGGKKAIEFHGEDNIRKHQQV
DTLDHCTLREANISAAGHLAELSEAAGAFVDVDLKANLLSDWHQVGLIAS
QIPLMEVLSLGGNRMKKSERVPPSIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036859CAP-Gly_dom_sf
IPR000938CAP-Gly_domain