mRNA_H-elongata_contig5653.13102.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: A0A6H5JIB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE) HSP 1 Score: 641 bits (1653), Expect = 1.870e-213 Identity = 372/556 (66.91%), Postives = 420/556 (75.54%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSP-----GYSQA---TSAQPDSPKRKSCAS-GKVVPTVN----GGEKTRRMDVQKKSRMEGKQGIVGRTVATCKGAGTSVVEAFMNTLRGFQVPSDLDPSRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLF-NDSGNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNKASS 1626
ILSGENWN VMYDARRATGW SVF+FVSL+IMGMMIVMNLFLAILLSNFTNKD VD EA G G G+ +GPPV SPRV PY P SPP SP G S++ T A S K + GK+V + GG+ + V G+ V R CK G + EA + + G +VP DLDP +ALFVLGP N +R+ CA +V NPGFDRFILLLISVSSLALA+D+PLR+PES A L VERVMT LFFIEMTLKICAHGF M AYLRS WNILDF VV+ISM+QL NDSGNL XXXXXXXXXX MINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKG +SCQG+ FDALPE++ FIEEP +W AMS +QQ WFGPLSN+SAAF+I+ TG +TTA+ C I++GWPD CC W SS +VPTS +VCECLGL+WD+T+ QQF+NVAQALLTFFEISTTEAWT+VM+AAVDATD+DMQPIRD VWFFMLFML+GSYLVMNLFVGVIIDNFNK S
Sbjct: 192 ILSGENWNTVMYDARRATGWVSVFYFVSLIIMGMMIVMNLFLAILLSNFTNKDDVDAEA-GGGSGNGENAGPPVEHPGSPRVAPYNPISPPPSPQRPKLGSSKSLTKTLANQQSFKPGGDGTTGKLVTISSNVGRGGDDGNEIKVG-----SGRPKFVVRAGRACKRFGADMYEACRSAIFGLRVPDDLDPGKALFVLGPDNKLRQGCAAVVHNPGFDRFILLLISVSSLALALDSPLRNPESATAKYLKGVERVMTALFFIEMTLKICAHGFALMPKAYLRSAWNILDFVVVVISMIQLITNDSGNLXXXXXXXXXXXXXXXX-MINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGILMSCQGEEFDALPESVALFIEEPTSWDAMSADQQSWFGPLSNISAAFSING-TGGFTTASACGSISAGWPDSGGCCTEWPSSASSVPTSYQVCECLGLDWDQTVPQQFDNVAQALLTFFEISTTEAWTSVMYAAVDATDVDMQPIRDNRVMIVWFFMLFMLIGSYLVMNLFVGVIIDNFNKMKS 739
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI) HSP 1 Score: 642 bits (1656), Expect = 4.900e-209 Identity = 368/551 (66.79%), Postives = 416/551 (75.50%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSP-----GYSQA---TSAQPDSPKRKSCASGKVVPTVNGGEKTRRMDVQKKSRMEGKQGIVGRTVATCKGAGTSVVEAFMNTLRGFQVPSDLDPSRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLF-NDSGNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNKASS 1626
ILSGENWN VMYDARRATGW SVF+FVSL+IMGMMIVMNLFLAILLSNFTNKD VD EA G G G+ +GPPV SPRV PY P SPP SP G S++ T A S K + + T++ D + G+ V R C+ G + EA + + G +VP DLDP +ALFVLGP N +R+ CA +V NPGFDRFILLLISVSSLALA+D+PLRDPES A L VERVMT LFFIEM LKICAHGF M AYLRS WNILDF VV+ISM+QL NDSGNLE XXXXXXXXXX MINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKG +SCQG+ FDALPE+I FI+EP +W AMS +QQ WFGPLSNVSAAF+++ TG +TTA+ C IN+GWPD CC W SS +VPTS ++CECLGL+WD+T+ QQF+NVAQALLTFFEISTTEAWT+VM+AAVDATD+DMQPIRD VWFFMLFML+GSYLVMNLFVGVIIDNFNK S
Sbjct: 690 ILSGENWNTVMYDARRATGWVSVFYFVSLIIMGMMIVMNLFLAILLSNFTNKDDVDAEA-GGGSGNGENAGPPVEHPGSPRVAPYNPVSPPPSPQRPKLGSSKSLTKTLANQQSFKAGGDGTAGKLVTMSSNVGRGSGDGNEIKVGSGRPRFVVRAGQACRRFGADMYEACRSAIFGLRVPDDLDPGKALFVLGPDNKLRQGCAAVVHNPGFDRFILLLISVSSLALALDSPLRDPESATAKYLKGVERVMTALFFIEMALKICAHGFALMPKAYLRSAWNILDFVVVVISMIQLVTNDSGNLEXXXXXXXXXXXXXXX-MINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGILMSCQGEEFDALPESIALFIQEPTSWDAMSADQQSWFGPLSNVSAAFSMNG-TGGFTTASACGSINAGWPDSGGCCTEWPSSASSVPTSYQLCECLGLDWDQTVPQQFDNVAQALLTFFEISTTEAWTSVMYAAVDATDVDMQPIRDNRVMIVWFFMLFMLIGSYLVMNLFVGVIIDNFNKMKS 1237
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: D8LI93_ECTSI (Similar to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 1.920e-135 Identity = 273/559 (48.84%), Postives = 343/559 (61.36%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSPGYSQATSAQPDSPKRKSCASGKVVPTVNGGEKTRRMDVQKK--SRMEGKQGIV-GRTVATCKGA----------GTSVVEAFMNTLRGFQVPSDLDPSRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLFNDSGNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSY-----TTAAD-CAIINSG-WPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
+LSGENWN MY ARRA GW SVF+FVSL+I+GMMIVM+LFLAILLS+F + + +A+ P G+ G+ AT + + + D + +R +G G A+ + G SV +R +VP ++ P AL L +N +RR CA +V+N GF R + LLI +SSL +A+D PLRDP+ST A L +E +T LF +E LK+CA GF FM AYLR WN+LDF VV++S+VQLF G S XXXXXXXXXX ++ R PGLKIVL AL ++ V NVAAVCF+F+IIFAIL VNYFKG +SCQGD FDALP +VSF+E+P+ W MS Q+ WFGPLSNVS AF+ D + S T+ + C +I G WPD AACC+AW +S PTS EVCECLGL W +TI QQF+NVA +LLT FEISTTEAWT+V +AAVDAT + MQPIRD VW F+LFML+G+YLVMNLFVGVI+DNF K
Sbjct: 422 VLSGENWNATMYSARRAVGWVSVFYFVSLIIVGMMIVMSLFLAILLSHFATPEQDEADAEXXXXXXXXXXXXXXXXXXXXXXXXXAPFGSVGTRGFPHATGVMEEXXXXXXXXXXXXXXXXSDAKVAGNWDTDESPDNRRDGVDADADGNHFASEREENAGCFSWSRLGASVAGYAAGAVRSVKVPENIYPGFALCCLSAKNPLRRGCAAVVSNAGFSRLVTLLIVLSSLTVALDTPLRDPDSTAAEALWALELALTFLFVLECVLKVCASGFFFMPLAYLRDAWNVLDFGVVMVSVVQLFLIRGAGLSGXXXXXXXXXXXXXXIVKRFPGLKIVLEALIGSVQGVFNVAAVCFLFYIIFAILCVNYFKGLLMSCQGDAFDALPGEVVSFLEDPLPWSEMSSGQREWFGPLSNVSEAFSGDGFSSSIGGNLSTSRVEYCDVITGGLWPDAAACCSAWPTSAEEAPTSYEVCECLGLSWAETIPQQFDNVAVSLLTLFEISTTEAWTSVTYAAVDATGVGMQPIRDHVIARVWLFILFMLLGAYLVMNLFVGVIVDNFKK 980
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE) HSP 1 Score: 405 bits (1041), Expect = 2.220e-123 Identity = 279/652 (42.79%), Postives = 349/652 (53.53%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTN----------------------------------------------------------------KDGVD-NEADGA-------------------GCGDWGKSGPPVGAAA-----SPRVTPYYPASPPGSPGYSQATSAQPDSPKRKSC-----------------ASGKVVPTVNGGEKTRRMDVQKKSRMEGKQGIVGRTVATCKGAGTSVVEAFMNTLRGFQVPSDLDPSRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLFNDSGNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSY-----TTAAD-CAIINSG-WPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
+LSGENWN MY ARRA GW SV +FVSL+++GMMIVM+LFLAILLS+F K+G + N ADG G + S P AA + R P G+ G AT + +G + + +D S G + + G SV +R +VP ++ P AL L +N RR CA +V+N GF R + LLI +SSL LA+D+PLRDP+ST A L +E +T LF +E LK+CA GF FM AYLR WN+LDF VV++S+VQLF G S XXXXXXXXXX ++ R PGLK+VL AL ++ V NVAAVCF+F+IIFAIL VNYFKG +SCQGD FDALP +VSF+E+P+ W MS Q+ WFGPLSNVS AF+ D + S T+ + C +I G WPD A CC+AW +S PTS EVCECLGL W +TI QQF+NVA +LLT FEISTTEAWT+V +AAVDA+ + MQPIRD VW F+LFML+G+YLVMNLFVGVI+DNF K
Sbjct: 808 VLSGENWNATMYSARRAVGWVSVIYFVSLIVVGMMIVMSLFLAILLSHFATPEQDEAVAEDRERXXXXXXXXXXXXXXXXXLTGATPAKHEEGKNGVGMKGEXXXXXXXXDVAARKEGAERNGADGGNKGPRTQGWYTSELDESFRGANSFFDSDSPGTAAQRALWRAHRAASTAPFGSVGTRGVPHATGEIEEEXXXXXXXXXXXXXXXXXXXXDAEVAGSWDTNESPDNGSDEVDADANSGDPGSERKENAGCFSLSRLGASVAGYAAGAVRSVKVPENIYPGFALCCLSAKNPWRRGCAAVVSNAGFSRLVTLLIVLSSLTLALDSPLRDPDSTAAEALGTLELALTFLFVLEGVLKVCASGFYFMPLAYLRDAWNVLDFGVVMVSVVQLFLVRGAGLSXXXXXXXXXXXXXXXIVKRFPGLKLVLEALIGSVQGVFNVAAVCFLFYIIFAILCVNYFKGLLMSCQGDAFDALPGEVVSFLEDPLPWSDMSSGQREWFGPLSNVSEAFSGDGFSSSIGGNLSTSGVEYCDVITGGLWPDAAGCCSAWPTSAEEAPTSYEVCECLGLSWAETIPQQFDNVAVSLLTLFEISTTEAWTSVTYAAVDASGVGMQPIRDHVMARVWLFILFMLLGAYLVMNLFVGVIVDNFKK 1459
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: A0A8K1CR88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR88_PYTOL) HSP 1 Score: 322 bits (826), Expect = 2.710e-93 Identity = 223/564 (39.54%), Postives = 310/564 (54.96%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSPGYSQATSAQPDSPKRKSCASG------KVVPTVNGGEKTRRMD--------VQKKSRMEGKQGIVGRTVATCKGAGTSVVEAFMNTLRGFQVPSDLDP-------SRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLFNDSG----NLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
+++GENWN +MYD R+ G +FVSL+I+G I+MNLFLA+LL NF+ ++ E + S AS +V P A +S++ + +KSC S + V +N G+ ++ +D ++ ++ G AF + Q+ + DP +LF+ N R V +V++P FD IL LI +SS++LA+DNPL +P STL+ L R++ LF +EM KI + G + GAYLR+ WN+LD +VI S++ L +S NL+SLXXXXXXXXXXPL RMI+R PGLK+V+NALF AIP VLNV VC +FF+IF+I+ VNY KG F +C GD FDAL F+ P+ W+ M+ EQQ WF +NS CA +P + TS E+CEC +W+ + + F+NV A+LTFFEISTTE W VM AA+D+T +DMQPIRD W +FF+LFM+VGS+ V+NLFVG+IIDNFN
Sbjct: 895 VITGENWNSIMYDVLRSNGMIGALYFVSLIILGNFILMNLFLALLLDNFSTEE----EEEPVKSEQEETSRQAAQKVASMKVVPLDRA----------LSSSRRNDQSKKSCRSENSDEDEEPVNAINLGDVSKEIDRELALSKTTSRRDKLREXXXXXXXXXXXXXXXGRLQSVAFPDE----QLDTGDDPFVIKPPPGNSLFLFSDTNRFRIVVYQVVSHPWFDNVILGLIVLSSVSLAVDNPLSNPNSTLSRFLKRMDNAFAILFLLEMLGKIISLGMIRHKGAYLRNSWNVLDCIIVITSIIMLIAESSSSGVNLKSLXXXXXXXXXXPL-RMISRRPGLKLVVNALFEAIPAVLNVLFVCALFFLIFSIVAVNYLKGTFSACSGDVFDALSPEQKDFLTLPIPWLQMTTEQQSWF---------------------------VNSS-------CAQQVQTPPGLTTSKEICECWNADWEPVLPENFDNVGMAMLTFFEISTTEGWADVMMAAMDSTSIDMQPIRDNTLIWGYFFILFMMVGSFFVVNLFVGIIIDNFNS 1405
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: A0A0W8DZZ2_PHYNI (Voltage-dependent L-type calcium channel subunit alpha-1S n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DZZ2_PHYNI) HSP 1 Score: 311 bits (796), Expect = 2.070e-90 Identity = 201/544 (36.95%), Postives = 287/544 (52.76%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSPGYSQATSAQPDSPKRKSCASGKVVPTVNG----GEKTRRMDVQKKSRMEGKQGIVGRTVATCKGAGTSVVEAFMNTLRGFQVPSDLDPSRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLFNDSGNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFG-PLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
IL+GENWN+VM D R++GW +V +FVSLV++G IV+NLFLAILL NF + D E D A+ ++ KRKS +V PT+N + + R D+ +S + R+++ + G+S F+ G R+LF+L N +R++ I+ +P FD L LI +S++ LAIDNPL P+S L R + V+T LF IE+ +KI A+GFV GAYLR+ WN++DF + + +F S + + PL RMINR PGLK+V+++L A+IP ++NV VC + F+IF+IL VN KG+F SCQGD F AL A +FI P W ++ +Q WF S V + F SS G + TS VC G W KTI Q F+NV + TFFE++TTE W +M +VDAT++DMQPI++ + +W +FF+ F+LVG++ VM LFVGV+I+NFN
Sbjct: 529 ILTGENWNVVMMDGWRSSGWSAVLYFVSLVVLGNFIVLNLFLAILLGNFDESN--DEERD-----------------------------------------AEREALKRKS----RVAPTINSPLSRNDASSRRDLDYRSSTTEE-----RSMSAARRQGSS----FLKNRLGLH--------RSLFILALDNPIRKLAMRILLHPQFDNLSLALIIISTVELAIDNPLSPPDSLYTTILSRFDSVLTVLFMIEVVIKIIAYGFVLHKGAYLRNSWNVMDFVITATAAFFMFQGSSQFKFVKTLRTFRALRPL-RMINRNPGLKLVVSSLIASIPQIVNVIMVCLLVFMIFSILAVNNLKGRFYSCQGDVFSALSSAQQAFIASPRLWTNLTIAEQNWFDHSASEVLSVF---------------------------------SSDGPL-TSRIVCNLFGATWAKTIPQNFDNVIHGIQTFFEMTTTEGWVTIMLTSVDATEIDMQPIQNHHESWAFFFICFILVGTFFVMQLFVGVVIENFNN 973
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: F0WCG7_9STRA (Similar to sodium channel putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCG7_9STRA) HSP 1 Score: 312 bits (800), Expect = 7.400e-90 Identity = 220/581 (37.87%), Postives = 308/581 (53.01%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSPGYSQ-----ATSAQPDSPKRKSCASGKVVPTVNGGEKTRRMDVQKKSRM------------------------------EGKQGIVG-RTVATCKGAGTSVVEAFMNTLRGFQVPSDLDPSR-ALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMH-GAYLRSGWNILDFAVVIISMVQLFNDSG----NLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
+++GENWN VMYDA RA G+ + +F+SLVI+G I+MNLFLA+LL NF K G D E + K P S V + + S + Q A A P P + S + P V + +DV+K + + + + GI ++++ K ++AF SDL P+ +L+ ++ RR+ I+ +P FD +LLLI+VSS+ALA+DNPL DP S+ A +L +E+ T LF IEM K+ A G +FMH AYLR+ WN+LD +V+ S V L +S NL+ L PL RMI+R PGLK+V+NALF ++P V+NV VC +F++IF+I+ VN KG F C G FD L EA + F+ P W+++ EQ+ WF + ++TT + YA +S TS +CEC G W+ I FNN+ A+LTFFE+STTE W VM A+DATD+DMQPIRD W +FF++F LVGS+ V+NLFVGVIIDNFN+
Sbjct: 750 VITGENWNNVMYDAIRANGFTASIYFISLVILGNFILMNLFLALLLDNFAGKGGNDTEERQQDLQNLAKRLGP-----SKVVPDHTHRNANESHAHRQSLVPIADMAMPIDPTK--LESREKRPVVEMKSRVDHLDVKKLNTLVQSFSRIKPLSSSDVDDPRDLFDQIVEFEKKFRDGIATPKSISQEKNQEEPSMDAFEERWNWLLSSSDLPPNNTSLYFFPEKHPWRRIAFAIINHPVFDNIVLLLIAVSSIALAVDNPLSDPTSSSAKSLKTLEKFCTILFTIEMLFKVFALG-LFMHKDAYLRNKWNVLDGIIVVTSWVTLIAESSSQVANLKFLRPLRGLRAFRPL-RMISRRPGLKLVVNALFESVPAVMNVMFVCVLFYLIFSIIAVNNLKGTFYKCTGKVFDRLNEAQLEFLTIPSPWISLKNEQKSWFD-----------NTTCQNFTT----------FQPYA------DASDLTRITSRYICECWGASWEPPIPWNFNNIGWAMLTFFELSTTEGWVTVMTQAIDATDIDMQPIRDHQMKWAYFFVIFNLVGSFFVVNLFVGVIIDNFNR 1294
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: G4YKH5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4YKH5_PHYSP) HSP 1 Score: 311 bits (796), Expect = 1.470e-89 Identity = 203/541 (37.52%), Postives = 283/541 (52.31%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSPGYSQATSAQPDSPKRKSCASGKVVPTVNGGEKTRRMDVQKKSRMEGKQGIVGRTVATCKGAGTSVVEAFMNTLRGFQVPSDLDPSRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLFNDSGNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWF--GPLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
IL+GENWN+VM D R++GW SV +FVSLV++G IV+NLFLAILL NF + + +A+ A R + PA+ S S +S + + ++RR V S + G AT G +S +F+ G R+LF+L N +R+ ++ +P FD L LI +S++ LAIDNPL P+S LA L + V+T LF IE+ +KI A+GF+ GAYLR+ WNI+DFA+ ++ +F S + + PL RMINR PGLK+V+++L A+IP ++NV VC + F IF+IL V+ KG F SCQGD FDAL A FI P AW ++ +Q WF P V F S G TS ++C+ LG W KTI Q F+NV + TFFE++TTE W +M +VDAT +DMQPI + + W +FF+ F+LVG++ VM LFVGV+I+NFNK
Sbjct: 545 ILTGENWNVVMLDGWRSSGWSSVLYFVSLVVLGNFIVLNLFLAILLGNFDESNDEERDAE---------------REALKRRSRVAPATQSSRRDVSSLREIDYRSSNEESRSXXXXXXNLT-ATRSRREAVSPTSNIFNDHG------ATASGHRSS---SFLKNRLGVH--------RSLFILALDNPIRKAANGLLLHPQFDNLSLALIVISTVQLAIDNPLNSPDSLLATVLSWFDSVLTVLFMIEVVIKIIAYGFILHKGAYLRNSWNIMDFAITAVAAFFMFQGSSQFKFVKTLRAFRALRPL-RMINRNPGLKLVVSSLIASIPQIVNVIMVCLLVFXIFSILAVSNLKGTFYSCQGDVFDALTTAQQEFIVSPRAWTNLTIAEQNWFDNSPAEIVQRVF----------------------------------SSGERLTSRDMCQLLGATWTKTIPQNFDNVIHGIQTFFEMTTTEGWVTIMLTSVDATQIDMQPIPNHHERWSFFFISFILVGTFFVMQLFVGVVIENFNK 1017
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: A0A5D6XXB3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXB3_9STRA) HSP 1 Score: 310 bits (795), Expect = 3.020e-89 Identity = 218/554 (39.35%), Postives = 297/554 (53.61%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEAD--GAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSPGYSQATSAQPDSPKRKSCASG-------KVVPTVNGGEKTRRMDVQKKSRMEGKQGIVGRTVATCKGAGTSVVEAFMNTLRGFQVPSDLDPSR--ALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLFNDS----GNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
+++GENWN +MYD R G + +F+SLVI G ++MNLFLA+LL NF+ DG + +A K + A +P S GS + + D ++ N E T+ ++ + +G G+ G + G G S + F DL P + +L++ + VR+V ++ NP FD+ IL LI +SS++LAIDNPL DP S L+ TL ++ +F +EM LKI A G AYLR WN+LD +V+ S++ L +S G+++SLXXXXXXXXXXPL RMI+R PGLK+V+NAL +IP V NV VC +FF IF+I+ VNY KG F +C+GD FD L A V F+ P +W + EQQ WF S C + +S TS VCECLG W + + FN+V A+LTF+EISTTE W+ VM AA+DATD+DMQPIRD W +FF+ FMLVG + +NLFVGVI DNFNK
Sbjct: 670 VITGENWNNIMYDTIRGNGMAACVYFISLVIFGNFVLMNLFLALLLDNFSIDDGDEEKAQERAEDAKKLAKKMSSMKVAPAPASRQRSRQSLHGSVASMEHAHFEADPILEDDXXXXXXDVHNLELDQLANELETTQLSRKKRAAGADGANGVGG----SADGDGGSSEDQF-----------DLLPPKGYSLYLFSEKTWVRKVAFRVINNPVFDKAILGLIVLSSVSLAIDNPLNDPASKLSRTLKGMDNAFAIIFCVEMVLKIIALGLAVHKKAYLRESWNVLDCIIVLSSLIMLIAESSGIGGSVKSLXXXXXXXXXXPL-RMISRRPGLKLVVNALIESIPAVANVLVVCALFFFIFSIMAVNYLKGTFYACKGDVFDGLDPAQVDFLVAPSSWANATAEQQAWFDQTS----------------------------------CVGFATSTSAKITSRYVCECLGAAWQPVMAENFNHVGTAMLTFYEISTTEGWSDVMMAAIDATDIDMQPIRDQNEVWAYFFLGFMLVGHFFAVNLFVGVITDNFNK 1173
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Match: D0MY98_PHYIT (Voltage-gated Ion Channel (VIC) Superfamily n=15 Tax=Phytophthora TaxID=4783 RepID=D0MY98_PHYIT) HSP 1 Score: 310 bits (793), Expect = 3.840e-89 Identity = 204/556 (36.69%), Postives = 289/556 (51.98%), Query Frame = 1
Query: 1 ILSGENWNMVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEADGAGCGDWGKSGPPVGAAASPRVTPYYPASPPGSPGYSQATSAQPDSPKRKSCASGKVVPTVNGGEKTRR-MDVQKKSRMEGKQGIVGRTVATCKGAGTSVV---EAFMNTLRGFQ-------------VPSDLDPSRALFVLGPRNTVRRVCAMIVTNPGFDRFILLLISVSSLALAIDNPLRDPESTLAVTLDRVERVMTGLFFIEMTLKICAHGFVFMHGAYLRSGWNILDFAVVIISMVQLFNDSGNLESLXXXXXXXXXXPLSRMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGKFLSCQGDGFDALPEAIVSFIEEPVAWVAMSEEQQGWFGPLSNVSAAFAIDADTGSYTTAADCAIINSGWPDYAACCAAWTSSPGNVPTSLEVCECLGLEWDKTIQQQFNNVAQALLTFFEISTTEAWTAVMWAAVDATDLDMQPIRDMYPNWVWFFMLFMLVGSYLVMNLFVGVIIDNFNK 1617
IL+GENWN+VM D R++GW +V +FVSLV++G IV+NLFLAILL NF + D E D AQ ++ KRKS +V PT N +RR +D + + E + +V EA + R F + + L R+LF+L N +R++ I+ +P FD F L LI VS++ LAIDNPL P+S L L + V+T LF IE+ +KI A+GFV GAYLR+ WN++DF + + +F S + + PL RMINR PGLK+V+++L A+IP ++NV VC + F+IF+IL VN KGKF SCQG+ F AL A +FI P W ++ +Q WF +++TA + ++S P TS +C G WDKTI Q F+NV + TFFE++TTE W +M +VDAT++DMQPI + + +W +FF+ F+LVG++ VM LFVGV+I+NFN
Sbjct: 546 ILTGENWNVVMMDGWRSSGWSAVLYFVSLVVLGNFIVLNLFLAILLGNFDESN--DEERD-----------------------------------------AQREALKRKS----RVAPTTNNQLSSRRDVDYRSSTTEERSRXXXXXXXXXXXXXXLTVGGRREALATSSRMFHELPGAVRRHGSSFLKNRLGLHRSLFILALDNPIRKLATRILLHPQFDNFSLALIIVSTIELAIDNPLSSPDSLLTNILSWFDAVLTVLFMIEVAIKIIAYGFVLHKGAYLRNSWNLMDFVITATAAFFMFQGSSQFKFVKTLRTFRALRPL-RMINRNPGLKLVVSSLIASIPQIVNVIMVCLLVFMIFSILAVNNLKGKFYSCQGNVFAALSSAQQAFIASPRPWTNLTVAEQTWF-----------------NHSTAEVISNLSSDGP----------------LTSRAICNLFGAAWDKTIPQNFDNVIHGIQTFFEMTTTEGWVTIMLTSVDATEIDMQPIPNHHESWAFFFICFILVGTFFVMQLFVGVVIENFNN 1020 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5653.13102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5653.13102.1 >prot_H-elongata_contig5653.13102.1 ID=prot_H-elongata_contig5653.13102.1|Name=mRNA_H-elongata_contig5653.13102.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=534bp MVMYDARRATGWESVFFFVSLVIMGMMIVMNLFLAILLSNFTNKDGVDNEback to top mRNA from alignment at H-elongata_contig5653:7714..10525+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5653.13102.1 ID=mRNA_H-elongata_contig5653.13102.1|Name=mRNA_H-elongata_contig5653.13102.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2812bp|location=Sequence derived from alignment at H-elongata_contig5653:7714..10525+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5653:7714..10525+ >mRNA_H-elongata_contig5653.13102.1 ID=mRNA_H-elongata_contig5653.13102.1|Name=mRNA_H-elongata_contig5653.13102.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3204bp|location=Sequence derived from alignment at H-elongata_contig5653:7714..10525+ (Himanthalia elongata Himel1 dioecious)back to top |