prot_H-elongata_contig56473.13096.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56473.13096.1
Unique Nameprot_H-elongata_contig56473.13096.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length113
Homology
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.010e-41
Identity = 70/113 (61.95%), Postives = 88/113 (77.88%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            MLANAP+SF+ GLQGLT  S MEAELV +AL MKEAVFCSN++ +LGF + F  +P+Y D+T+ LH  GNR++S R  HIALR+FF++ LV +GKISIHY   ED LA +GTK
Sbjct:   81 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTK 193          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.020e-40
Identity = 71/113 (62.83%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            MLANAP+SF+ GLQGLT  S MEAELV +AL MKEAVFCSN++ +LGF + F  +P+Y D+T+ LH  GNR++S R  HIALR+FF++ LV +GKISIHY   ED LAD+GTK
Sbjct:  306 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTK 418          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 3.780e-40
Identity = 72/113 (63.72%), Postives = 91/113 (80.53%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            MLANAP+SF+ GLQGLT  S MEAELV +AL MKEAVFCSN++ +LGF + F  +P+Y D+T+ LH  GNR++S R  HIALR+FF++ LV +GKISIHYV+ ED LAD+GTK
Sbjct:  866 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTK 978          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 6.080e-39
Identity = 71/113 (62.83%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            MLANAP+SF+ GLQGLT  S MEAELV +AL MKEAVFCSN++ +LG  + F  +P+Y D+T+ LH  GNR++S R  HIALR+FF++ LV +GKISIHYV  ED LAD+GTK
Sbjct:  527 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 639          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 4.890e-37
Identity = 69/113 (61.06%), Postives = 88/113 (77.88%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            +LANAP+SF+ GLQGLT  S MEAELV +AL M EAVF SN++ +LGF + F  +P+Y D+T+ LH  GNR++S R  HIALR+FF++ LV +GKISIHYV  ED LAD+GTK
Sbjct: 1535 VLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 1647          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.220e-36
Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            ML NAPVSFK G+QG T  S MEAEL+ +AL MKEAVFCSN++ +LG  + F  VPLY D+T+ LH  GNR++S R  HIALR+F+++ L+ +G+ISIHY+  +  +AD+GTK
Sbjct: 1036 MLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTK 1148          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5J9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N2_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 2.280e-36
Identity = 67/113 (59.29%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            ML +A ++FK GLQ LT QS MEAELV AAL MKEAVFCSN++ +LGF + F  VPLY D+T+ LH  GNR++S R  HIALR+FF++ LV +GKI IH+V  +   AD+GTK
Sbjct:  224 MLYDALMAFKSGLQSLTAQSTMEAELVAAALAMKEAVFCSNILTELGFGKEFAQVPLYCDNTATLHSLGNRSHSSRTKHIALRFFFIRDLVSEGKIFIHFVPTDSNPADIGTK 336          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.250e-35
Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            ML +AP++FK GLQ LTTQS ME ELV AAL +KEAVFCSN++ +LGF +    VPLY D+T+ LH  GNR+YS    HIALR+FF++ LV +G+I+IHYV A+   AD+GTK
Sbjct:  589 MLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTK 701          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 3.690e-35
Identity = 65/113 (57.52%), Postives = 88/113 (77.88%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            M++ APVSFK GLQ LT  S +EAELV AAL MKE +FC+N++ +LGF   F S PLYI+ T+ LHV GN+T+S R  H+ALR+F+++ +V++G+ISIHY+  ED LAD+GTK
Sbjct:  560 MMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYIN-TATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTK 671          
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 2.400e-34
Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDESFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHYVKAEDQLADLGTK 113
            ML +APVS K G+QG    S MEAEL+ +AL MKEAVFCSN++ +LGF + F  VPLY D+T+ LH  GNR++S R  HIALR+F+++ LV +G+ISIHYV  +  LAD+GTK
Sbjct: 1064 MLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTK 1176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56473.13096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE1.010e-4161.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE2.020e-4062.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE3.780e-4063.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE6.080e-3962.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE4.890e-3761.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K129_9PHAE1.220e-3656.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9N2_9PHAE2.280e-3659.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG39_9PHAE1.250e-3559.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBU1_9PHAE3.690e-3557.52CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JBV6_9PHAE2.400e-3457.52Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56473contigH-elongata_contig56473:1460..1798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56473.13096.1mRNA_H-elongata_contig56473.13096.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56473 1460..2401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56473.13096.1 ID=prot_H-elongata_contig56473.13096.1|Name=mRNA_H-elongata_contig56473.13096.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
MLANAPVSFKVGLQGLTTQSMMEAELVVAALTMKEAVFCSNVILKLGFDE
SFGSVPLYIDSTSALHVAGNRTYSPRAMHIALRYFFVQGLVEDGKISIHY
VKAEDQLADLGTK
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