prot_H-elongata_contig116655.1307.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116655.1307.1
Unique Nameprot_H-elongata_contig116655.1307.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length149
Homology
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: D7FVK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK4_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.590e-82
Identity = 136/149 (91.28%), Postives = 138/149 (92.62%), Query Frame = 0
Query:    1 ICNVGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVEVRLF 149
            ICN GERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQ R LPIRVQLKGLSE DLYKILTEPKNNLIRQQVE+MKTEGVD+QF DEAIREIARV AY NK VENIGARRLHTVLERIVE   F
Sbjct:  334 ICNAGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQGR-LPIRVQLKGLSEDDLYKILTEPKNNLIRQQVEIMKTEGVDLQFTDEAIREIARVGAYVNKTVENIGARRLHTVLERIVETISF 481          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: A0A836CKY0_9STRA (ATP-dependent hsl protease ATP-binding subunit hslU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY0_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.020e-63
Identity = 105/145 (72.41%), Postives = 123/145 (84.83%), Query Frame = 0
Query:    1 ICNVGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            ICN  + R ADASAEGVQRDLLP+IEGS+++T+HGN++T FILFIASGAF  CKPSD+LAELQ R LPIRV+LKGL+E D+Y+ILTEP  NLIRQQ  L+  EGVD+ F D AIRE+ARVAA  N+ VENIGARRLHTVLER+VE
Sbjct:  337 ICNASDYRGADASAEGVQRDLLPLIEGSAITTKHGNVNTDFILFIASGAFSQCKPSDLLAELQGR-LPIRVELKGLTEEDMYRILTEPVTNLIRQQKALLAAEGVDLVFEDAAIREVARVAAKVNRTVENIGARRLHTVLERVVE 480          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: W7TQM4_9STRA (Atp-dependent hsl protease atp-binding subunit hslu n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQM4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 6.200e-63
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0
Query:    1 ICNVGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            ICN  + R ADASAEGVQRDLLP+IEG ++ST+HGNI+T +ILFI+SGAFH CKP+D+LAELQ R LPIRV+LKGL+E D+Y+ILTEP  NLI QQV L+ TE + ++F DEA+REIARVAA  NK VENIGARRLHTVLERIVE
Sbjct:  406 ICNPSDYRGADASAEGVQRDLLPLIEGCTISTKHGNINTDYILFISSGAFHQCKPADLLAELQGR-LPIRVELKGLTEEDMYRILTEPVTNLIAQQVALLSTENIALEFTDEAVREIARVAALVNKTVENIGARRLHTVLERIVE 549          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: A0A5D6XXH3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH3_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.710e-62
Identity = 107/146 (73.29%), Postives = 127/146 (86.99%), Query Frame = 0
Query:    1 ICNVGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            IC+ G+ RR AD S+EGVQRDLLP+IEGS +ST+HGN+ T  ILF+ASGAFHS KPSD+LAELQ R LPIRV+LKGL+EADLY+ILTEP  NLI+QQVEL+KTE V ++F DEAIREIARV+A  N+ VENIGARRLHTVLE++VE
Sbjct:  321 ICSNGDYRRQADPSSEGVQRDLLPLIEGSVISTKHGNVSTDHILFVASGAFHSAKPSDLLAELQGR-LPIRVELKGLTEADLYRILTEPVTNLIKQQVELIKTEDVHLEFTDEAIREIARVSAEINQTVENIGARRLHTVLEKVVE 465          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: A0A836CKX4_9STRA (ATP-dependent protease ATP-binding subunit HslU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX4_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.590e-62
Identity = 103/145 (71.03%), Postives = 121/145 (83.45%), Query Frame = 0
Query:    1 ICNVGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            ICN  + R ADASAEGVQRDLLP+IEGS+++T+HGNI+T FILFI SGAF  CKPSD++AELQ R LPIRV+LKGL+E D+Y+ILTEP  NLIRQQ EL+  E + + F D AIREIARVAA  N+ VENIGARRLHTVLER+VE
Sbjct:  237 ICNASDYRGADASAEGVQRDLLPLIEGSAITTKHGNINTDFILFIGSGAFSQCKPSDLIAELQGR-LPIRVELKGLTEEDMYRILTEPVTNLIRQQEELLAAENITLVFEDAAIREIARVAAQVNRTVENIGARRLHTVLERVVE 380          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: A0A2D4BX63_PYTIN (ATP-dependent protease HslVU, ATPase subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX63_PYTIN)

HSP 1 Score: 206 bits (524), Expect = 4.830e-62
Identity = 106/146 (72.60%), Postives = 125/146 (85.62%), Query Frame = 0
Query:    1 ICNVGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            IC+ G+ RR AD S+EGVQRDLLP+IEG  +ST+HGN++T  ILFI SGAFHS KPSD+LAELQ R LPIRV+LKGL+E DLY+ILTEP  NLI+QQ+EL+KTE V ++F DEAIREIARVAA  NK VENIGARRLHTVLE++VE
Sbjct:  276 ICSNGDFRRQADPSSEGVQRDLLPLIEGCVISTKHGNVNTDHILFIGSGAFHSAKPSDLLAELQGR-LPIRVELKGLTEQDLYRILTEPVTNLIKQQIELIKTEDVHLEFTDEAIREIARVAAEINKTVENIGARRLHTVLEKVVE 420          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: A0A7J7IPS3_9RHOD (ClpB_D2-small domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPS3_9RHOD)

HSP 1 Score: 198 bits (504), Expect = 8.810e-62
Identity = 94/143 (65.73%), Postives = 124/143 (86.71%), Query Frame = 0
Query:    7 RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVEVRLF 149
            R  ADASAEGVQRDLLP++EG++VST++GN++T  ILF+A+GAFH CKPSD++AELQ R LPIRV+L+GL+EADLY+ILTEP+N+L++QQ+ L++TEG+D++F D AI E+A +AA  N  VENIGARRLHTV+ERI+E   F
Sbjct:   53 RHGADASAEGVQRDLLPLLEGTTVSTKYGNVNTDHILFVAAGAFHQCKPSDLMAELQGR-LPIRVELRGLNEADLYRILTEPENSLLKQQIALLRTEGIDLEFTDAAIHEMAAIAAEVNTTVENIGARRLHTVVERIIETISF 194          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: K3WIF2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIF2_GLOUD)

HSP 1 Score: 206 bits (525), Expect = 1.410e-61
Identity = 103/146 (70.55%), Postives = 128/146 (87.67%), Query Frame = 0
Query:    1 ICNVGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            IC+ G+ RR AD S+EGVQRDLLP+IEGS +ST+HGN++T  ILF+ASGAFHS KPSD+LAELQ R LPIRV+LKGL+E+DLY+ILTEP  NLI+QQ+EL+KTE V ++F +EA+REIARVA+  NK +ENIGARRLHTVLE++VE
Sbjct:  340 ICSNGDFRRQADPSSEGVQRDLLPLIEGSVISTKHGNVNTDHILFVASGAFHSAKPSDLLAELQGR-LPIRVELKGLTESDLYRILTEPVTNLIKQQIELIKTEDVHLEFTEEAVREIARVASEINKTIENIGARRLHTVLEKVVE 484          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: A0A024GVM8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GVM8_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.600e-61
Identity = 99/145 (68.28%), Postives = 127/145 (87.59%), Query Frame = 0
Query:    1 ICNVGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            IC+ G+ RSADAS+EGVQRDLLP++EGS +ST+HGN++T  ILFI SGAFHS KPSD+LAELQ R LPIRV+LKGL+E+DLY+ILTEP ++L+RQQ+EL+KTE +D+ F ++AIREIARVA   N  +ENIGARRLHT++E++VE
Sbjct:  371 ICSTGDFRSADASSEGVQRDLLPLLEGSVISTKHGNVNTDHILFIGSGAFHSSKPSDLLAELQGR-LPIRVELKGLTESDLYRILTEPVSSLVRQQIELLKTEKIDLDFTEDAIREIARVATDINNTIENIGARRLHTIMEKVVE 514          
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Match: G4YNG4_PHYSP (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=G4YNG4_PHYSP)

HSP 1 Score: 205 bits (521), Expect = 4.780e-61
Identity = 103/146 (70.55%), Postives = 128/146 (87.67%), Query Frame = 0
Query:    1 ICNVGE-RRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAFHSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELMKTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVE 145
            IC+ G+ RRS+D S+EGVQRDLLP+IEGS +ST+HGN++T  ILF+ SGAFHS KPSD+LAELQ R LPIRV+LKGL+E DL++ILTEP  NLI+QQVEL+KTEGV++ F D+A+REIARVAA  N+ VENIGARRLHTV+E++VE
Sbjct:  333 ICSSGDFRRSSDPSSEGVQRDLLPLIEGSVISTKHGNVNTDHILFVGSGAFHSSKPSDLLAELQGR-LPIRVELKGLTEEDLHRILTEPVTNLIKQQVELIKTEGVNLNFTDDAVREIARVAAEINQTVENIGARRLHTVVEKVVE 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116655.1307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK4_ECTSI1.590e-8291.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKY0_9STRA6.020e-6372.41ATP-dependent hsl protease ATP-binding subunit hsl... [more]
W7TQM4_9STRA6.200e-6372.41Atp-dependent hsl protease atp-binding subunit hsl... [more]
A0A5D6XXH3_9STRA1.710e-6273.29Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A836CKX4_9STRA2.590e-6271.03ATP-dependent protease ATP-binding subunit HslU n=... [more]
A0A2D4BX63_PYTIN4.830e-6272.60ATP-dependent protease HslVU, ATPase subunit n=1 T... [more]
A0A7J7IPS3_9RHOD8.810e-6265.73ClpB_D2-small domain-containing protein n=1 Tax=Cy... [more]
K3WIF2_GLOUD1.410e-6170.55Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024GVM8_9STRA2.600e-6168.28Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
G4YNG4_PHYSP4.780e-6170.55Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019489Clp ATPase, C-terminalSMARTSM01086ClpB_D2_small_2coord: 76..149
e-value: 3.0E-4
score: 27.9
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 76..148
e-value: 3.0E-7
score: 30.4
NoneNo IPR availableGENE3D3.40.50.300coord: 1..73
e-value: 5.3E-11
score: 44.3
NoneNo IPR availableGENE3D1.10.8.60coord: 76..149
e-value: 1.6E-28
score: 100.4
NoneNo IPR availablePANTHERPTHR43815:SF1ATP-DEPENDENT PROTEASE ATPASE SUBUNIT HSLUcoord: 3..145
IPR003959ATPase, AAA-type, corePFAMPF07724AAA_2coord: 7..62
e-value: 4.7E-16
score: 59.4
IPR004491Heat shock protein HslUPANTHERPTHR43815FAMILY NOT NAMEDcoord: 3..145
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116655contigH-elongata_contig116655:11..1876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116655.1307.1mRNA_H-elongata_contig116655.1307.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116655 11..1876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116655.1307.1 ID=prot_H-elongata_contig116655.1307.1|Name=mRNA_H-elongata_contig116655.1307.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
ICNVGERRSADASAEGVQRDLLPMIEGSSVSTRHGNIDTSFILFIASGAF
HSCKPSDMLAELQARMLPIRVQLKGLSEADLYKILTEPKNNLIRQQVELM
KTEGVDIQFADEAIREIARVAAYANKMVENIGARRLHTVLERIVEVRLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019489Clp_ATPase_C
IPR003959ATPase_AAA_core
IPR004491HslU
IPR027417P-loop_NTPase