mRNA_H-elongata_contig5612.13053.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: D7G0G2_ECTSI (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G2_ECTSI) HSP 1 Score: 600 bits (1546), Expect = 1.240e-207 Identity = 332/427 (77.75%), Postives = 365/427 (85.48%), Query Frame = 1
Query: 397 ESDQDLESFKKAFPGMSSDEDEKDQKEDRKGDEPARFGLGEDSDEGHEKMEEGSDDDDEIDSGDQEEDSDDGRLMKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGII--ADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIPFKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
ES+Q+L+SF +AFPGMSSDE+E + D G G SD D+DE D G LM +ERQ+KALDKK AR++ E + EA+EGL+RDVLE R ALG++ +G E G + +EEEVVPPQ+LKERIESV+EVLS FQE+RDPALSRADY+ERLAKDLKEYYGFLRELVDMFL MFSPAECVEF+EASDKPRPLVIRANTLKTRRKDLAEALIKRGV+LEP+AKW+KVGLKITES IPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGK++YIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRN+LVCCHDGRKIPFK VDRVLLDAPCSGLGVISRDQSVKIQRT KD+ RS+HLQKELL AAVDAVSAKSATGGVIVYSTCSVSVAENEQ+
Sbjct: 190 ESEQELQSFMEAFPGMSSDEEEGE-------DGTGLGGAGMVSDXXXXXXXXXXSDEDEEDGG----------LMDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIEVLSQFQEKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSATGGVIVYSTCSVSVAENEQL 599
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: A0A6H5JZZ2_9PHAE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ2_9PHAE) HSP 1 Score: 595 bits (1533), Expect = 9.610e-202 Identity = 331/429 (77.16%), Postives = 363/429 (84.62%), Query Frame = 1
Query: 397 ESDQDLESFKKAFPGMSSDEDEKDQKEDRKGDEPARFGLGEDSDEGHEKMEEGSDDDDEIDSGDQEEDSDDGRLMKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGII----ADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIPFKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
ES+Q+L+SF +AFPGMSSDE+E GED +ED +DG LM +ERQ+KALDKK AR++ E + EA+EGL+RDVLE R ALG++ DG + GG +EEEVVPPQ+LKERIESV+EVLS+FQERRDPALSRADY+ERLAKDLKEYYGFLRELVDMFL MFSPAECVEF+EASDKPRPLVIRANTLKTRRKDLAEALIKRGV+LEP+AKW+KVGLKITES IPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGK++YIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRN+LVCCHDGRKIPFK VDRVLLDAPCSGLGVISRDQSVKIQRT KD+ RS+HLQKELL AAVDAVSAKSATGG+IVYSTCSVSVAENEQV
Sbjct: 190 ESEQELQSFMEAFPGMSSDEEE-----------------GEDGTGLXXXXXXXXXXXXXXXXXXSDEDEEDGGLMHIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEAEGG--QEEEVVPPQVLKERIESVIEVLSEFQERRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSATGGIIVYSTCSVSVAENEQV 599
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: A0A836CI73_9STRA (Ribosomal RNA methyltransferase nop2like protein put n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI73_9STRA) HSP 1 Score: 461 bits (1186), Expect = 4.750e-152 Identity = 239/332 (71.99%), Postives = 278/332 (83.73%), Query Frame = 1
Query: 703 LKRDVLESRAALGI-IADGVKEVGGDNEEEEV------VPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIP--FKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
L+RD+ E+R AL + + + + G+ EE E PP +LKERI VVEVLSDF+ RR+ +SRA+Y+E+LA+D+ EYYG LREL+D+FL MFSPAE VEFMEASD+PRP+VIR NTLKTRRKDLAEALIKRGV+LEP+A W+KVGLK+TES +PIGATPEYLAGHYMLQSAASMCPVMAL PQ ER+LD+S+APGGKTSYI QLMRNTG V+ANDL+ RQ+ATVANLHRLGVRN+LVCCHDGR +P DR LLDAPCSGLGVIS D SVK+QRT+KDV+R+AHLQKELL AAVD VSA SATGGV+VYSTCSVSV ENEQV
Sbjct: 168 LQRDLEEARLALKLPVTEEAGDSAGEEEEGEAGARAESAPPTVLKERIADVVEVLSDFKARRNARVSRAEYVEQLARDMAEYYGCLRELIDLFLRMFSPAEAVEFMEASDRPRPVVIRTNTLKTRRKDLAEALIKRGVSLEPVAAWSKVGLKVTESTVPIGATPEYLAGHYMLQSAASMCPVMALDPQPNERILDLSSAPGGKTSYICQLMRNTGAVVANDLKAGRQKATVANLHRLGVRNALVCCHDGRALPGLIGGFDRALLDAPCSGLGVISHDPSVKVQRTLKDVQRTAHLQKELLCAAVDCVSAASATGGVVVYSTCSVSVEENEQV 499
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: A0A7S2KVL9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KVL9_9STRA) HSP 1 Score: 444 bits (1141), Expect = 1.380e-148 Identity = 226/354 (63.84%), Postives = 293/354 (82.77%), Query Frame = 1
Query: 616 LMKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGIIADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIP--FKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
LM+VER A LD A L E EA+ L+R V + + + V+E+ GD E VVPP ++ RIE ++EVL+DF++RR+ SR++Y++RL D+ E++G L EL+++FLNMF+P EC+EF++ASD PRPLVIR NTLK RRKDLA+AL+KRG+NL+PLAKW+KVGLKI+ESP+P+GATPEYLAG+YMLQSAASMCPVMAL+PQ GE+V+DM++APGGKTSY+AQ+M+NTG ++ANDL+ +RQ+AT+ANLHRLGV+N++VCCHDGRK+ DR+LLDAPCSGLGVISRDQSVK+QRT+KD+ER+AHLQKELL A +DA++ KS TGG +VYSTCSVSVAENE+V
Sbjct: 101 LMQVERDAMELDMA-ANLERE---EAESELQRTVRDQSSIFHLPT--VEELEGDGMER-VVPPSEIRARIEDIIEVLADFKQRREEGRSRSEYLDRLKYDMSEFFGCLPELIELFLNMFNPTECLEFLDASDMPRPLVIRTNTLKVRRKDLAQALMKRGINLDPLAKWSKVGLKISESPVPVGATPEYLAGYYMLQSAASMCPVMALSPQPGEKVMDMASAPGGKTSYLAQMMKNTGHILANDLKKERQKATIANLHRLGVKNTVVCCHDGRKLAKMVNRFDRILLDAPCSGLGVISRDQSVKVQRTIKDIERTAHLQKELLLAGIDALNHKSKTGGFMVYSTCSVSVAENEEV 447
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: A0A7S2KX50_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KX50_9STRA) HSP 1 Score: 444 bits (1141), Expect = 3.790e-146 Identity = 226/354 (63.84%), Postives = 293/354 (82.77%), Query Frame = 1
Query: 616 LMKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGIIADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIP--FKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
LM+VER A LD A L E EA+ L+R V + + + V+E+ GD E VVPP ++ RIE ++EVL+DF++RR+ SR++Y++RL D+ E++G L EL+++FLNMF+P EC+EF++ASD PRPLVIR NTLK RRKDLA+AL+KRG+NL+PLAKW+KVGLKI+ESP+P+GATPEYLAG+YMLQSAASMCPVMAL+PQ GE+V+DM++APGGKTSY+AQ+M+NTG ++ANDL+ +RQ+AT+ANLHRLGV+N++VCCHDGRK+ DR+LLDAPCSGLGVISRDQSVK+QRT+KD+ER+AHLQKELL A +DA++ KS TGG +VYSTCSVSVAENE+V
Sbjct: 101 LMQVERDAMELDMA-ANLERE---EAESELQRTVRDQSSIFHLPT--VEELEGDGMER-VVPPSEIRARIEDIIEVLADFKQRREEGRSRSEYLDRLKYDMSEFFGCLPELIELFLNMFNPTECLEFLDASDMPRPLVIRTNTLKVRRKDLAQALMKRGINLDPLAKWSKVGLKISESPVPVGATPEYLAGYYMLQSAASMCPVMALSPQPGEKVMDMASAPGGKTSYLAQMMKNTGHILANDLKKERQKATIANLHRLGVKNTVVCCHDGRKLAKMVNRFDRILLDAPCSGLGVISRDQSVKVQRTIKDIERTAHLQKELLLAGIDALNHKSKTGGFMVYSTCSVSVAENEEV 447
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: B8C1V6_THAPS (SAM_MT_RSMB_NOP domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V6_THAPS) HSP 1 Score: 437 bits (1125), Expect = 1.320e-145 Identity = 234/355 (65.92%), Postives = 287/355 (80.85%), Query Frame = 1
Query: 619 MKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGIIADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIPFK---SVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGG-VIVYSTCSVSVAENEQV 1671
M+VERQ+K +D + + EA+VE ++R + + + + +E+ D E VVPP L+ RIE V+EVL+DF+ RR+P SR+DYIERLA+D+ E +G+L+ELVD FL+MF P EC+EF+EASDKPRPLV+R NTLK RRKDLA AL+KRGV L+PLA W+KVGLKI ES +PIGATPEYLAGHYMLQSAASMCPVMAL PQ G+RVLDMSAAPGGKTSY++QLM+N GVVIANDL+P+RQ+ATVANLHRLGVRN + C +DGRKI + S DR+LLDAPCSGLGVISRD SVK+QRT+ DV+R AHLQKELL AA+DA++AKS GG +VYSTCSV+VAENE+V
Sbjct: 29 MEVERQSKLIDAEMLAEQEEAEVE----MRRTIAQQTSVYHLPT--AEEIAED--ENRVVPPSELRARIEDVLEVLADFKTRREPGRSRSDYIERLAQDMAELFGYLQELVDYFLSMFGPNECLEFLEASDKPRPLVVRVNTLKARRKDLAAALMKRGVRLDPLAPWSKVGLKIYESTVPIGATPEYLAGHYMLQSAASMCPVMALGPQPGDRVLDMSAAPGGKTSYVSQLMKNKGVVIANDLKPERQKATVANLHRLGVRNVVTCVYDGRKIGNQLRNSFDRILLDAPCSGLGVISRDPSVKVQRTIPDVQRCAHLQKELLLAAIDALNAKSKKGGGCMVYSTCSVAVAENEEV 375
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: A0A7S2D419_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D419_9STRA) HSP 1 Score: 439 bits (1130), Expect = 7.710e-144 Identity = 231/355 (65.07%), Postives = 284/355 (80.00%), Query Frame = 1
Query: 616 LMKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGIIADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIP--FKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGG-VIVYSTCSVSVAENEQV 1671
L+ VE++++ +++++ ++ EA E +K D ++R L D E+E ++PP +LKERI+ ++EVLSDF++RR P +R DY+E+LA DL EYYG+LREL D+FL + SPAECVEFMEAS+ PRPLVIR NTLKTRRKDLAEALIKRGV LEPLA W+KVGLKI ES +PIGATPEYL+GHYM+Q+A+SMCPVMAL PQ GERVLDMSAAPGGKTSY+AQLM+N G +IANDL+ +RQ++T ANL RLGVRNS+VCCH+G+ P DRVLLDAPCSGLG+ SRDQSVKIQRTVKDVE+ AHLQKELL AA+D+VSA S GG V+VYSTCSV+V ENE V
Sbjct: 109 LLPVEQESRRIEEEDMQIDREADEEMDRIVKED--KARFFLPERTD---------EDEGIMPPGVLKERIQDIIEVLSDFKDRRQPGRARTDYVEQLALDLTEYYGYLRELTDLFLGILSPAECVEFMEASESPRPLVIRTNTLKTRRKDLAEALIKRGVQLEPLASWSKVGLKILESSVPIGATPEYLSGHYMIQAASSMCPVMALDPQPGERVLDMSAAPGGKTSYVAQLMKNQGSIIANDLKKERQKSTTANLQRLGVRNSIVCCHNGKAFPQVMGGFDRVLLDAPCSGLGIASRDQSVKIQRTVKDVEKMAHLQKELLLAAIDSVSATSKNGGGVVVYSTCSVTVHENELV 452
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: K3WHE3_GLOUD (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHE3_GLOUD) HSP 1 Score: 425 bits (1093), Expect = 4.690e-141 Identity = 209/299 (69.90%), Postives = 257/299 (85.95%), Query Frame = 1
Query: 781 EEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIP--FKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
+EEE P + +RI+ ++EVL+ F++RR+P SR DY+E LAKD+ Y+G+ REL+DMF+ MFSPAEC+EF+EA+++PRPLVIR NTLKTRR+DLA+ALI+RGVNL+PLAKW+KVGLKI +SP+PIGATPEYLAGHYMLQSA+S+C VMALAPQ ERVLDM+ APGGKT+YIAQLM+NTG +IANDL+ QR +ATVANLHRLGV+N+ V C+DGRK+P FK DRVLLDAPC+G+GVI+RD S+K Q+T KDV+R AHLQKELL AA+DAV AKS TGG I+YSTCSV V ENE V
Sbjct: 20 DEEEASDPAEIYQRIKDIIEVLAQFKDRREPGRSRIDYVETLAKDISNYFGYNRELIDMFMKMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQLNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKTEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVEENESV 318
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: A0A421GV82_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GV82_9STRA) HSP 1 Score: 427 bits (1099), Expect = 3.180e-140 Identity = 226/353 (64.02%), Postives = 284/353 (80.45%), Query Frame = 1
Query: 619 MKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGIIADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIP--FKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
+ +ER+A+ LD++EA L+AQ EA+E ++ ++ + + + E G E++++ P + +RI+ VVEVLS F RR+P SR DY+E LAKDL Y+G+ REL+DMFL MFSPAECVEF+EA+++PRPLVIR NTLK RR+DLA+ALI+RGVNL+PLAKW+KVGLKI +SP+PIGATPEYLAGHYMLQSA+S+C VMALAPQ ERVLDM+ APGGKT+YIAQLM+NTG +IANDL+ QR +ATVANLHRLGV+N+ V C+DGRK+P FK DRVLLDAPC+G+GVI+RD S+K Q+ KDV+R AHLQKELL AA+DAV AKS TGG I+YSTCSV V ENE V
Sbjct: 98 LDIERKARLLDEEEA---LQAQ-EAEEEMRLNIANNEKYHLQTEEELAEEG--EEDDDMTDPAEVYQRIKDVVEVLSQFSARREPGRSRVDYMESLAKDLSGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQLNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESV 444
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Match: A0A2D4C7W3_PYTIN (Ribosomal RNA methyltransferase nop2-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7W3_PYTIN) HSP 1 Score: 428 bits (1101), Expect = 3.320e-140 Identity = 226/353 (64.02%), Postives = 279/353 (79.04%), Query Frame = 1
Query: 619 MKVERQAKALDKKEARLRLEAQVEAQEGLKRDVLESRAALGIIADGVKEVGGDNEEEEVVPPQILKERIESVVEVLSDFQERRDPALSRADYIERLAKDLKEYYGFLRELVDMFLNMFSPAECVEFMEASDKPRPLVIRANTLKTRRKDLAEALIKRGVNLEPLAKWTKVGLKITESPIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKTSYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNSLVCCHDGRKIP--FKSVDRVLLDAPCSGLGVISRDQSVKIQRTVKDVERSAHLQKELLSAAVDAVSAKSATGGVIVYSTCSVSVAENEQV 1671
+ +ER+A+ LD+++AR EA+ E + + + R L +E + E+ P + +RI+ V+EVLS F+ERR+P SR +Y+E LA DL Y+G+ REL+DMF+ MFSPAEC+EF+EA+++PRPLVIR NTLKTRR+DLA ALI+RGVNL+PLAKW+KVGLKI +SP+PIGATPEYLAGHYMLQSA+SMC VMALAPQ ERVLDM+ APGGKT+YI+QLM+NTG VIANDL+ QR +ATVANLHRLGV+N V C+DGRK+P FK DRVLLDAPC+GLGVI+RD S+K Q+T KDV+R AHLQKELL AA+DAV AKSATGG IVYSTCSV V ENE V
Sbjct: 121 LDIERKARRLDERQAREAAEAEEEMRLNIANN---ERFHLP-----TEEEQDEEAEDAATDPAEVYQRIKDVIEVLSHFKERREPGRSRVEYVETLAADLANYFGYNRELIDMFMQMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLATALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSMCAVMALAPQLNERVLDMACAPGGKTTYISQLMKNTGTVIANDLKKQRLKATVANLHRLGVKNCTVSCYDGRKVPSLFKGFDRVLLDAPCTGLGVIARDPSIKTQKTEKDVQRLAHLQKELLLAAIDAVDAKSATGGYIVYSTCSVMVEENEAV 465 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5612.13053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5612.13053.1 >prot_H-elongata_contig5612.13053.1 ID=prot_H-elongata_contig5612.13053.1|Name=mRNA_H-elongata_contig5612.13053.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=558bp AAKGVRTKKGKGHSRREGNILNLGKENEASSKSVGKGRTFQLKRKRAGAAback to top mRNA from alignment at H-elongata_contig5612:1881..5628+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5612.13053.1 ID=mRNA_H-elongata_contig5612.13053.1|Name=mRNA_H-elongata_contig5612.13053.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3748bp|location=Sequence derived from alignment at H-elongata_contig5612:1881..5628+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5612:1881..5628+ >mRNA_H-elongata_contig5612.13053.1 ID=mRNA_H-elongata_contig5612.13053.1|Name=mRNA_H-elongata_contig5612.13053.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3348bp|location=Sequence derived from alignment at H-elongata_contig5612:1881..5628+ (Himanthalia elongata Himel1 dioecious)back to top |