prot_H-elongata_contig56.13029.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56.13029.1
Unique Nameprot_H-elongata_contig56.13029.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length217
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56.13029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 13..26
score: 55.81
coord: 34..47
score: 45.51
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 1..79
coord: 136..217
coord: 28..145
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 69..173
NoneNo IPR availablePANTHERPTHR27000:SF631RECEPTOR-LIKE PROTEIN KINASE HAIKU2coord: 69..173
coord: 28..145
NoneNo IPR availablePANTHERPTHR27000:SF631RECEPTOR-LIKE PROTEIN KINASE HAIKU2coord: 1..79
coord: 136..217
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..217
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 154..177
e-value: 96.0
score: 5.2
coord: 82..106
e-value: 110.0
score: 4.8
coord: 178..202
e-value: 21.0
score: 10.6
coord: 10..34
e-value: 25.0
score: 9.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..83
e-value: 1.5E-25
score: 90.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 84..217
e-value: 1.8E-47
score: 163.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 12..71
e-value: 1.6E-7
score: 31.0
coord: 156..215
e-value: 3.7E-9
score: 36.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56contigH-elongata_contig56:927..18921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56.13029.1mRNA_H-elongata_contig56.13029.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56 927..18921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56.13029.1 ID=prot_H-elongata_contig56.13029.1|Name=mRNA_H-elongata_contig56.13029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp
GPIPNELGKLTTLTVLDLSSNQLSGPIPKELGKLTTLKVISLSSNKLSGP
IPNELGNLTALTVLILFRTQLSGPIPNELGNITALEELHLQDNKLSGPIP
KELGNLTALTVLNLFRTQLSGSIPSELGKLTALTVLNLFINQLTGPIPNE
LGKLTALTTLYLSKNQLSGPIPKMLGKLTALTTLYLYRNQLSGPLPNELG
KLTALTTLYLFSNQLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt