mRNA_H-elongata_contig55975.13027.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55975.13027.1
Unique NamemRNA_H-elongata_contig55975.13027.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: D7G8Y3_ECTSI (Aurora kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y3_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 2.420e-110
Identity = 184/338 (54.44%), Postives = 226/338 (66.86%), Query Frame = 1
Query:    1 QVNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPFVSARP-----------------TRTAVSSSSPGGT----------GAKKSVAAEIETVHEGDPHAQLYGRIVEWNGSPRGLFGGGTLGESIPDVAQDVVLAMLRPRAEDRLETREVLLLPWLASADHG 933
            QV   LGMGKFG VY+AK KQS   KTVA+K++ KS+L D   Q+ VNL RE  +Q  L H NIV +   FQDPK+ YLVLD+A+GGDVYK L +    +GLPH VAA YL DA SA+AYLH  HV+HRD+KA    NLL+DS+GR++LSDFGW+VHA PP  H R+T+CGTPEYA PE+LV  P+YT  VDIWSLGVLA+ELL GKTPF  A P                 T+T++S S+  G            A+ + A+E+E +H+GD HA+LYGRI  W GS   LFG GT G   P++A+DVV+AMLRP   DRLE  EVL LPW+A    G
Sbjct:    7 QVTSKLGMGKFGIVYKAKSKQS--HKTVAIKVIYKSSLRDGNYQDAVNLDRERRLQANLRHPNIVGIQNSFQDPKFVYLVLDFASGGDVYKVLSQERHKTGLPHEVAAAYLHDAASAIAYLHRMHVIHRDLKAE---NLLVDSKGRLQLSDFGWAVHAKPPHQHIRRTMCGTPEYAPPEILVRHPEYTKAVDIWSLGVLAFELLTGKTPFSRAHPATSPQTAADCNNNDGSSTQTSLSPSAGSGPTAAGMQRAPGSAEVAAASEVEEIHKGDDHAKLYGRIAGWGGSRDSLFGRGTRGSGAPELARDVVMAMLRPVPGDRLEAGEVLKLPWVALRGKG 339          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: A0A2D4BPP9_PYTIN (Aurora kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPP9_PYTIN)

HSP 1 Score: 184 bits (467), Expect = 2.010e-50
Identity = 112/210 (53.33%), Postives = 138/210 (65.71%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTL-NDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPF 630
            V K+LG GKFG VY AK K S  + TVALK+L KS L  D      VNLKREVEIQ++L H NIVR+  +F D    YL+L+YA  G++YK L +    S    A+AA Y+   V A+ YLH  HV+HRDI      NLLL S   +KL+DFGWSVHA P ++  R+T CGTP+Y +PEMLV G +Y   VD+WSLGVLA+E L G TPF
Sbjct:   82 VTKNLGKGKFGNVYLAKEKHS--NVTVALKVLFKSPLIQDG---GIVNLKREVEIQSRLKHPNIVRLFGYFYDEACVYLILEYAPQGELYKXLSKQRYFS---EALAAHYIAQVVEALEYLHSCHVIHRDIXPE---NLLLGSNHTIKLADFGWSVHA-PQQYARRKTFCGTPDYLSPEMLV-GEEYDRRVDVWSLGVLAFEFLFGSTPF 278          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: A0A4D9CMY1_9STRA (Aurora kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMY1_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.890e-50
Identity = 140/353 (39.66%), Postives = 183/353 (51.84%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYK---ALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLL-------------DSRGR-------------------VKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPF-VSARPTRTAVS----SSSPGGTGAKKS---------VAAEIETVHEGDPHAQLYGRIVEWNGSPRGLFGGGTLGESIPDVAQDVVLAMLRPRAEDRLETREVLLLPWL 915
            V + LG GKFG VY A+  +S  SK+VALK++ K++L   +      L+REVEIQ +L H +I+R+  +F DPK  +LVL++A+GG++YK   AL  N     L  ++AA+Y+R    AV YLH  HV+HRDIK     NLLL              S GR                   +KL DFGW+VHA PP  H RQTLCGT EY +PEM V G  Y   VD+W+LG+LAYELL GKTPF V     R AVS        GG G K            A E   + +G    ++Y RI  + G+        T    +   A+  V A+L P  +DR+     L  PWL
Sbjct:   83 VGRPLGRGKFGNVYLAR--ESRTSKSVALKVIFKNSLTGGKSFNL--LRREVEIQIRLRHPHILRLYGYFHDPKSCFLVLEWASGGELYKHLKALPENR----LEESLAAQYMRQVALAVQYLHACHVIHRDIKPE---NLLLAGDLPPSAAPATASSHGRRSSGSTGVGAAGVLPADHVLKLCDFGWAVHATPPDQHWRQTLCGTAEYLSPEM-VAGKPYDRTVDVWALGILAYELLQGKTPFYVPEGENRGAVSMDRGEGREGGAGGKXXXXXXXXXXXAATEDGDMKKG--REEVYARIAAYEGAL-------TFPYPVSVEARSFVSALLVPDPQDRVSLDAALRHPWL 414          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: D0N2X6_PHYIT (Aurora kinase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N2X6_PHYIT)

HSP 1 Score: 177 bits (449), Expect = 7.190e-50
Identity = 109/209 (52.15%), Postives = 132/209 (63.16%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPF 630
            V K+LG GKFG VY AK K S  + TVALK+L KS L   R     NLKREVEIQ +L H N++RM  +F D    YLVL+YA  G++YK L +    S    AVAA Y+   V A+ Y H  +V+HRDIK     NLL+     +KL+DFGWSVHA  P  + R+T CGTP+Y +PEM V+G  Y Y  D WSLGVL YELL G TPF
Sbjct:   62 VTKNLGQGKFGNVYLAKEKCS--NLTVALKVLFKSPLT--RDGGVSNLKREVEIQVRLRHPNVLRMHGYFYDDSCVYLVLEYAPFGELYKELAKEKHFS---DAVAAHYVSQVVEALKYCHSCNVIHRDIKPE---NLLIGHNKTIKLADFGWSVHAPTPN-NVRKTFCGTPDYLSPEM-VMGESYDYRTDSWSLGVLTYELLVGSTPF 258          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: A0A5D6XSJ2_9STRA (Aurora kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSJ2_9STRA)

HSP 1 Score: 183 bits (465), Expect = 8.710e-50
Identity = 111/211 (52.61%), Postives = 134/211 (63.51%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPFVS 636
            V KSLG GKFG VY AK + S  + TVALK++ KS L         NLKREVEIQ++L H NI+R+  +F D    YLVL+YA  G++YK L +    S    AVAA Y+   V A+ Y H   V+HRDIK     NLLL +   VKL+DFGWSVHA  P   +RQT CGTP+Y +PEML LG  Y++  D WSLGVL YELL G TPF S
Sbjct:  328 VTKSLGKGKFGNVYLAKERHS--NMTVALKVIFKSPL--VHEGGISNLKREVEIQSRLEHPNIIRLYGYFYDESCVYLVLEYATQGELYKQLSKQ---SHFSEAVAAHYVAQVVDALRYCHGCKVIHRDIKPE---NLLLGNNHTVKLADFGWSVHAPKPH-DKRQTFCGTPDYLSPEML-LGQPYSFETDAWSLGVLTYELLVGTTPFYS 526          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: G4YWP4_PHYSP (Aurora kinase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YWP4_PHYSP)

HSP 1 Score: 176 bits (447), Expect = 9.290e-50
Identity = 109/212 (51.42%), Postives = 134/212 (63.21%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVN-LKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPFVS 636
            V K+LG GKFG VY AK K +  + TVALK+L KS L    R   VN LKREVEIQ +L H N++ M  +F D    YLVL+YA  G++YK L +         AVAARY+   + A+ Y H  +V+HRDIK     NLLL     +KL+DFGWSVHA  P ++ R+T CGTP+Y +PEM V+G  Y Y  D WSLGVL YELL G TPF S
Sbjct:   46 VTKNLGQGKFGNVYLAKEKCT--NVTVALKVLFKSPLT---RDGGVNNLKREVEIQARLRHPNVLCMHGYFYDDSCVYLVLEYAPYGELYKELAKE---KFFADAVAARYVAQVIEALRYCHSCNVIHRDIKPE---NLLLGHNQTIKLADFGWSVHAPKP-YNLRKTFCGTPDYLSPEM-VMGESYDYRTDSWSLGVLTYELLVGSTPFYS 244          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: H3G5Z5_PHYRM (Aurora kinase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5Z5_PHYRM)

HSP 1 Score: 172 bits (435), Expect = 1.730e-48
Identity = 108/209 (51.67%), Postives = 133/209 (63.64%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPF 630
            V K+LG GKFG VY AK K S  + TVALK+L KS L   R     NLKREVEIQ +L H NI+RM  +F D    YLVL+YA  G++YK L R         AVAA Y+   V A+ Y H  +V+HRDIK     NLLL     +KL+DFGWSV+A  P ++ R+TLCGTP+Y +PEM +LG  + +  D WSLGVL +ELL G TPF
Sbjct:    9 VTKNLGQGKFGNVYLAKEKCS--NVTVALKVLFKSPLT--RDGGVCNLKREVEIQGRLHHPNILRMHGYFYDDSCVYLVLEYAPYGELYKELARE---KFFADAVAAHYVGQVVEALKYCHCCNVIHRDIKPE---NLLLGFNQTIKLADFGWSVYAPKP-YNMRKTLCGTPDYLSPEM-ILGEPHDFRTDSWSLGVLTFELLVGSTPF 205          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: A0A1S8VV73_9FUNG (Aurora kinase n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VV73_9FUNG)

HSP 1 Score: 174 bits (441), Expect = 2.990e-48
Identity = 103/213 (48.36%), Postives = 140/213 (65.73%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPFVSAR 642
            V + LG GKFGRVY A+ K S     VALK+L K+ L++A+ +++  L+RE+EIQ+ L H NI+R+  +F D K  YL+L+YAA G++YK L +    +    +V+A+Y+    +A+AYLH  HV+HRDIK     NLLL  +G +K++DFGWSVHA   R   RQTLCGT +Y  PEM V G ++   VD+WSLGVL YE L G  PF   R
Sbjct:  103 VGRPLGKGKFGRVYLAREKHS--GYVVALKILFKTELSEAKVEKQ--LRREIEIQSHLRHPNILRLYGYFYDSKRVYLILEYAAQGEMYKKLQKL---TRFSESVSAKYISQMANALAYLHRKHVIHRDIKPE---NLLLGLKGELKIADFGWSVHAPNAR---RQTLCGTLDYLPPEM-VEGKEHNEKVDLWSLGVLCYEFLVGVPPFEDQR 301          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: A0A7S2JTP4_9STRA (Aurora kinase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTP4_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.070e-48
Identity = 102/205 (49.76%), Postives = 137/205 (66.83%), Query Frame = 1
Query:   16 LGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPF 630
            LG GKFGRV+RA+ KQS   + VALK+LSKS L+    Q  + L+REVEIQ +L H NI+R+  +F D K+ YL+L+ A GG++YK + R   GS      A+ +++   +A+ +L   H++HRDIK     NLL+ S G++KLSDFGW+ HA PP    R TLCGT EY APEML+    Y + +D W+LGVL YEL+ GKTPF
Sbjct:  242 LGKGKFGRVHRAQEKQS--KEIVALKVLSKSQLSSGSSQLLL-LRREVEIQARLIHENILRLFGFFHDEKFVYLILEEATGGELYKVMARK-PGSRFQEVEASVFVKQVATALLFLKSKHILHRDIKPE---NLLIGSDGKLKLSDFGWACHAPPP-LSRRTTLCGTAEYCAPEMLI-EKCYDHNIDNWALGVLMYELVVGKTPF 437          
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Match: F4PCH9_BATDJ (Aurora kinase n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PCH9_BATDJ)

HSP 1 Score: 174 bits (441), Expect = 3.460e-48
Identity = 104/213 (48.83%), Postives = 138/213 (64.79%), Query Frame = 1
Query:    4 VNKSLGMGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQTKLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVAARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVHAVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGKTPFVSAR 642
            V + LG GKFGRVY A+ K S     VALK+L KS L++A+ +++  L+RE+EIQ+ L H NI+R+  +F D K  YL+L++AA G++YK L +    +  P   AA+Y+    +A+AYLH  HV+HRDIK     NLLL  +G +K++DFGWSVHA   R   RQTLCGT +Y  PEM V G  +   VD+WSLGVL YE L G  PF   R
Sbjct:  105 VGRPLGKGKFGRVYLAREKHS--GYVVALKILFKSELSEAKVEKQ--LRREIEIQSHLRHPNILRLYGYFYDSKRVYLILEFAAQGEMYKQLRKL---TRFPEPQAAKYISQMANALAYLHRKHVIHRDIKPE---NLLLGLKGELKIADFGWSVHAPNAR---RQTLCGTLDYLPPEM-VEGKDHNEKVDLWSLGVLCYEFLVGVPPFEDQR 303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55975.13027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Y3_ECTSI2.420e-11054.44Aurora kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A2D4BPP9_PYTIN2.010e-5053.33Aurora kinase n=1 Tax=Pythium insidiosum TaxID=114... [more]
A0A4D9CMY1_9STRA3.890e-5039.66Aurora kinase n=1 Tax=Nannochloropsis salina CCMP1... [more]
D0N2X6_PHYIT7.190e-5052.15Aurora kinase n=1 Tax=Phytophthora infestans (stra... [more]
A0A5D6XSJ2_9STRA8.710e-5052.61Aurora kinase n=1 Tax=Pythium brassicum TaxID=1485... [more]
G4YWP4_PHYSP9.290e-5051.42Aurora kinase n=1 Tax=Phytophthora sojae (strain P... [more]
H3G5Z5_PHYRM1.730e-4851.67Aurora kinase n=1 Tax=Phytophthora ramorum TaxID=1... [more]
A0A1S8VV73_9FUNG2.990e-4848.36Aurora kinase n=2 Tax=Batrachochytrium salamandriv... [more]
A0A7S2JTP4_9STRA3.070e-4849.76Aurora kinase n=1 Tax=Leptocylindrus danicus TaxID... [more]
F4PCH9_BATDJ3.460e-4848.83Aurora kinase n=2 Tax=Batrachochytrium dendrobatid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55975contigH-elongata_contig55975:128..2277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score331.3
Seed ortholog evalue4.9e-88
Seed eggNOG ortholog2880.D7G8Y3
EggNOG free text desc.histone serine kinase activity
EggNOG OGsKOG0580@1,KOG0580@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-09_004090.1
Exons5
Model size942
Cds size921
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55975.13027.1prot_H-elongata_contig55975.13027.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55975 149..2277 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930910.8809037-UTR-H-elongata_contig55975:127..1481622930910.8809037-UTR-H-elongata_contig55975:127..148Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55975 128..148 +
1691679621.2909691-UTR-H-elongata_contig55975:127..1481691679621.2909691-UTR-H-elongata_contig55975:127..148Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55975 128..148 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930910.898064-CDS-H-elongata_contig55975:148..2321622930910.898064-CDS-H-elongata_contig55975:148..232Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 149..232 +
1691679621.3007977-CDS-H-elongata_contig55975:148..2321691679621.3007977-CDS-H-elongata_contig55975:148..232Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 149..232 +
1622930910.913741-CDS-H-elongata_contig55975:481..6491622930910.913741-CDS-H-elongata_contig55975:481..649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 482..649 +
1691679621.3098795-CDS-H-elongata_contig55975:481..6491691679621.3098795-CDS-H-elongata_contig55975:481..649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 482..649 +
1622930910.9271526-CDS-H-elongata_contig55975:926..10641622930910.9271526-CDS-H-elongata_contig55975:926..1064Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 927..1064 +
1691679621.31938-CDS-H-elongata_contig55975:926..10641691679621.31938-CDS-H-elongata_contig55975:926..1064Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 927..1064 +
1622930910.965434-CDS-H-elongata_contig55975:1296..15011622930910.965434-CDS-H-elongata_contig55975:1296..1501Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 1297..1501 +
1691679621.3292677-CDS-H-elongata_contig55975:1296..15011691679621.3292677-CDS-H-elongata_contig55975:1296..1501Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 1297..1501 +
1622930910.9776862-CDS-H-elongata_contig55975:1951..22771622930910.9776862-CDS-H-elongata_contig55975:1951..2277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 1952..2277 +
1691679621.3438375-CDS-H-elongata_contig55975:1951..22771691679621.3438375-CDS-H-elongata_contig55975:1951..2277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55975 1952..2277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55975.13027.1

>prot_H-elongata_contig55975.13027.1 ID=prot_H-elongata_contig55975.13027.1|Name=mRNA_H-elongata_contig55975.13027.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=307bp
MGKFGRVYRAKVKQSTKSKTVALKLLSKSTLNDARRQERVNLKREVEIQT
KLSHSNIVRMMTWFQDPKWFYLVLDYAAGGDVYKALCRNGSGSGLPHAVA
ARYLRDAVSAVAYLHENHVVHRDIKARRRYNLLLDSRGRVKLSDFGWSVH
AVPPRFHERQTLCGTPEYAAPEMLVLGPKYTYPVDIWSLGVLAYELLAGK
TPFVSARPTRTAVSSSSPGGTGAKKSVAAEIETVHEGDPHAQLYGRIVEW
NGSPRGLFGGGTLGESIPDVAQDVVLAMLRPRAEDRLETREVLLLPWLAS
ADHGES*
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mRNA from alignment at H-elongata_contig55975:128..2277+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55975.13027.1 ID=mRNA_H-elongata_contig55975.13027.1|Name=mRNA_H-elongata_contig55975.13027.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2150bp|location=Sequence derived from alignment at H-elongata_contig55975:128..2277+ (Himanthalia elongata Himel1 dioecious)
CAGGTGAACAAGTCTCTGGGAATGGGCAAGTTCGGACGGGTGTACCGTGC GAAGGTAAAGCAGTCCACCAAAAGCAAGACCGTCGCGCTGAAGCTTCTCT CAAAGGTGACCCTCTCGTTGCGTTGCCGCGCGAACATGGGATACACGGAC GGAATATCATAGTAACTTTGAACGCAAGGCTGCGAGCTCCCGCAACTCCT CGTCGGCCGGTCGGAGCACCCGGGCGTCACAGATCTGAAAACTTTCGCAG CTCTGAAAATTGAACGACATGCCTTGCATTAACAGCTATGGGCACGTGTC AAAGACCCTGATTTGGAGGCGTTTTTTTTGCTACACCCCACGTGGTGTTT CCAGAGTACTCTGAACGATGCTCGCCGCCAGGAGCGGGTCAACCTCAAGC GTGAGGTTGAGATCCAGACCAAGCTGTCGCATTCCAACATCGTGAGGATG ATGACGTGGTTCCAAGATCCGAAGTGGTTCTATTTGGTGCTCGACTACGC GGCCGGTGGCGACGTGTACAAGGTGAGAGGAAGATCGGTGTTGAAAATGA AATGCTTTAGTTTCCCGTTCTGTCCGCTAGTGGGTCGATTTGGGTAATCT CTTCCGTTGAAATTTTGAAACTAGATGTCAGGTTTTATATTGAATTTAGT ATGTAAAAACAGATCGAGTTCCATAGGGATTAAGCTAAGACCTTGCTCGT CGCTCCTCTGGTTGCTCGCCATCTATAGAATATTATATGTATTTATACAC GACGATAGTTGACGCAGTCGTTGTTTCCTTTTTGTTTCCGTTGGGGCAGG CGTTGTGCCGTAACGGCAGCGGCAGCGGTCTACCCCATGCCGTCGCGGCG AGATATTTGAGAGACGCCGTGAGTGCAGTGGCCTACCTCCACGAGAACCA TGTCGTCCACAGGGATATCAAGGCAAGGCGCCGATACGTGAAGCTTTTTC CCTTGTCGGATTTCTTGTCCGTTACGCTTTCTCGAGAGCTAGATGCATAG TGCCGGTGATTGATAAGCGCGGGGGGGGGGTGTTCAGGTGGGTAAAGTCT TTATGTCGATGTAATTGTGGGTAGCGAGTATTAGGAGCACTCGTGTTATA ATATGAAGACTACTAATTAATCAATCGTGCAAATGCCACCACCGCCATAT CTGGGACCTCCAGCCAGAGAATCTCCTGCTAGACTCTCGGGGCCGGGTGA AACTGTCGGACTTCGGTTGGTCGGTGCATGCAGTGCCTCCTCGGTTCCAC GAACGCCAGACGCTGTGCGGGACGCCCGAGTACGCGGCCCCCGAGATGCT GGTTCTTGGACCGAAATACACGTACCCCGTGGACATCTGGAGCCTTGGTG TTCTGGCTTACGAACTGCTTGCAGGTGACGTTTTGTGGAGGACTCAGAGG GTGTATTTGATCGGATGTGGGTGGCTCAATAATGTCTAATAAAAAATCGA TGTATTTCGCCTCGTCTGTAGCTAGTCAGGCTACCAAGTTGCAGCTGGTT GGCAAGTGCTACATACCGCGACGTTTGTTGCCCTCGCTTGAATCAGGTCC TGTAAACCGATGACCGTCCTCTGTCGGAGGTTCGACTGAAGCTGCGTTGA CACTCGCCCGAAATTGTACCGCCATAATAATGTCTTTTGTAATGAAGGCT ACGTGCTCCTATCAAGTGCTCCTATCAATAGTTTCCCTTGTTTGCGATAC TCGCTTATCTACCAAGCGGAATTCCCACTGATGCCAATACTTTTCTCTGA GACCTTATCAAACAAATTTTTGATCGTTTGTGACCTCGAACTCCAAACAA TGTGGTTCGCGCCCTTGGCCCCAGGTAAGACCCCCTTCGTCTCTGCTCGG CCAACGAGGACAGCGGTCTCGTCCAGCTCTCCAGGCGGTACGGGCGCTAA GAAGAGCGTTGCCGCGGAAATAGAGACGGTTCACGAGGGCGATCCCCATG CCCAGCTGTACGGCCGGATCGTGGAGTGGAACGGATCTCCAAGAGGCTTG TTTGGGGGAGGGACGCTGGGAGAGAGCATCCCCGATGTGGCGCAAGATGT GGTGCTGGCAATGCTGCGGCCGCGTGCGGAGGACAGATTGGAGACTCGTG AGGTCCTACTGCTGCCCTGGTTAGCTTCGGCTGATCACGGGGAGTCATAA
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Coding sequence (CDS) from alignment at H-elongata_contig55975:128..2277+

>mRNA_H-elongata_contig55975.13027.1 ID=mRNA_H-elongata_contig55975.13027.1|Name=mRNA_H-elongata_contig55975.13027.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1842bp|location=Sequence derived from alignment at H-elongata_contig55975:128..2277+ (Himanthalia elongata Himel1 dioecious)
ATGGGCAAGTTCGGACGGGTGTACCGTGCGAAGGTAAAGCAGTCCACCAA
AAGCAAGACCGTCGCGCTGAAGCTTCTCTCAAAGATGGGCAAGTTCGGAC
GGGTGTACCGTGCGAAGGTAAAGCAGTCCACCAAAAGCAAGACCGTCGCG
CTGAAGCTTCTCTCAAAGAGTACTCTGAACGATGCTCGCCGCCAGGAGCG
GGTCAACCTCAAGCGTGAGGTTGAGATCCAGACCAAGCTGTCGCATTCCA
ACATCGTGAGGATGATGACGTGGTTCCAAGATCCGAAGTGGTTCTATTTG
GTGCTCGACTACGCGGCCGGTGGCGACGTGTACAAGAGTACTCTGAACGA
TGCTCGCCGCCAGGAGCGGGTCAACCTCAAGCGTGAGGTTGAGATCCAGA
CCAAGCTGTCGCATTCCAACATCGTGAGGATGATGACGTGGTTCCAAGAT
CCGAAGTGGTTCTATTTGGTGCTCGACTACGCGGCCGGTGGCGACGTGTA
CAAGGCGTTGTGCCGTAACGGCAGCGGCAGCGGTCTACCCCATGCCGTCG
CGGCGAGATATTTGAGAGACGCCGTGAGTGCAGTGGCCTACCTCCACGAG
AACCATGTCGTCCACAGGGATATCAAGGCAAGGCGCCGATACGCGTTGTG
CCGTAACGGCAGCGGCAGCGGTCTACCCCATGCCGTCGCGGCGAGATATT
TGAGAGACGCCGTGAGTGCAGTGGCCTACCTCCACGAGAACCATGTCGTC
CACAGGGATATCAAGGCAAGGCGCCGATACAATCTCCTGCTAGACTCTCG
GGGCCGGGTGAAACTGTCGGACTTCGGTTGGTCGGTGCATGCAGTGCCTC
CTCGGTTCCACGAACGCCAGACGCTGTGCGGGACGCCCGAGTACGCGGCC
CCCGAGATGCTGGTTCTTGGACCGAAATACACGTACCCCGTGGACATCTG
GAGCCTTGGTGTTCTGGCTTACGAACTGCTTGCAGAATCTCCTGCTAGAC
TCTCGGGGCCGGGTGAAACTGTCGGACTTCGGTTGGTCGGTGCATGCAGT
GCCTCCTCGGTTCCACGAACGCCAGACGCTGTGCGGGACGCCCGAGTACG
CGGCCCCCGAGATGCTGGTTCTTGGACCGAAATACACGTACCCCGTGGAC
ATCTGGAGCCTTGGTGTTCTGGCTTACGAACTGCTTGCAGGTAAGACCCC
CTTCGTCTCTGCTCGGCCAACGAGGACAGCGGTCTCGTCCAGCTCTCCAG
GCGGTACGGGCGCTAAGAAGAGCGTTGCCGCGGAAATAGAGACGGTTCAC
GAGGGCGATCCCCATGCCCAGCTGTACGGCCGGATCGTGGAGTGGAACGG
ATCTCCAAGAGGCTTGTTTGGGGGAGGGACGCTGGGAGAGAGCATCCCCG
ATGTGGCGCAAGATGTGGTGCTGGCAATGCTGCGGCCGCGTGCGGAGGAC
AGATTGGAGACTCGTGAGGTCCTACTGCTGCCCTGGTTAGCTTCGGCTGA
TCACGGGGAGTCATAAGTAAGACCCCCTTCGTCTCTGCTCGGCCAACGAG
GACAGCGGTCTCGTCCAGCTCTCCAGGCGGTACGGGCGCTAAGAAGAGCG
TTGCCGCGGAAATAGAGACGGTTCACGAGGGCGATCCCCATGCCCAGCTG
TACGGCCGGATCGTGGAGTGGAACGGATCTCCAAGAGGCTTGTTTGGGGG
AGGGACGCTGGGAGAGAGCATCCCCGATGTGGCGCAAGATGTGGTGCTGG
CAATGCTGCGGCCGCGTGCGGAGGACAGATTGGAGACTCGTGAGGTCCTA
CTGCTGCCCTGGTTAGCTTCGGCTGATCACGGGGAGTCATAA
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