prot_H-elongata_contig55847.13013.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55847.13013.1
Unique Nameprot_H-elongata_contig55847.13013.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: D7FSR6_ECTSI (Triosephosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR6_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.840e-34
Identity = 61/81 (75.31%), Postives = 72/81 (88.89%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKV 81
            VEVAVIPPHPFLVPV++QV+ V G+ V+VG+Q+LY E+ GAFTGA STGML+SVGC Y+LCGHSERR VFGDSDE VN+KV
Sbjct:   82 VEVAVIPPHPFLVPVKDQVDGVDGNKVAVGSQDLYTEDAGAFTGASSTGMLASVGCEYILCGHSERRSVFGDSDEMVNKKV 162          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A7Y5GW52_9DELT (Triosephosphate isomerase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y5GW52_9DELT)

HSP 1 Score: 101 bits (251), Expect = 1.760e-24
Identity = 51/85 (60.00%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKVTTTL 85
            VE+AV PP PFLVPV  ++   +GS + +GAQ+ Y+ ++GAFTGA+S  ML SVGC Y+LCGHSERR VFGDSD TV  KV  T+
Sbjct:   36 VEIAVFPPFPFLVPVAAKL---AGSRIGLGAQDCYVADKGAFTGAVSAPMLRSVGCRYILCGHSERRSVFGDSDATVAAKVRRTV 117          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A835ZJI0_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI0_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 7.480e-24
Identity = 47/81 (58.02%), Postives = 64/81 (79.01%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKV 81
            VEV +IPP+PF+ PVR+   ++ GS ++VGAQN ++E++GAFTGA+ST ML SVGC YVLCGHSERR +F + +  +N KV
Sbjct:   39 VEVGIIPPYPFVPPVRD---ALKGSGITVGAQNAFVEDKGAFTGAVSTTMLLSVGCEYVLCGHSERRTIFKEDNALINSKV 116          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: K8Z6D5_NANGC (Triosephosphate isomerase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z6D5_NANGC)

HSP 1 Score: 98.2 bits (243), Expect = 9.650e-24
Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKV 81
            V+VAV+ P PFLVPV+E   ++ GS+V +GAQ+LY E++GA+TGA S  M+ SVG  +VLCGHSERR +FGD+DETVN K+
Sbjct:   88 VDVAVVVPFPFLVPVKE---TLKGSNVLIGAQDLYTEDKGAYTGATSLPMIKSVGAQWVLCGHSERRALFGDTDETVNAKL 165          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A7S3PY81_9STRA (Triosephosphate isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY81_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.140e-23
Identity = 43/80 (53.75%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    2 EVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKV 81
            EV + PPHPF   V+ +VE +    ++VGAQ+++ EN+GA+TG++S  M+ S+GC YVLCGHSERR +FGDSD+++N+KV
Sbjct:   79 EVVIFPPHPFAARVKAEVEDIG---ITVGAQSVFYENKGAYTGSVSINMVKSIGCEYVLCGHSERRTLFGDSDDSINRKV 155          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A7S4ETX6_CHRCT (Triosephosphate isomerase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETX6_CHRCT)

HSP 1 Score: 99.0 bits (245), Expect = 3.590e-23
Identity = 48/81 (59.26%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKV 81
            V+VAV  P+PF+VPV+E   +++GS V +GAQ+ Y E  GA+T A+ST ML SVGC YVL GHSERR +FGD+DE +N+KV
Sbjct:   89 VDVAVCVPYPFIVPVKE---ALAGSKVGLGAQDCYYEESGAYTAAVSTSMLKSVGCDYVLAGHSERRAIFGDTDEDINKKV 166          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A4D9CPZ8_9STRA (Triosephosphate isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPZ8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.720e-23
Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKV 81
            V+VAV+ P PFLVPV+E   ++ GS+V +GAQ+LY E++GA+TGA S  M+ SVG  +VLCGHSERR +FGD+DETVN K+
Sbjct:   88 VDVAVVVPFPFLVPVKE---TLKGSNVLIGAQDLYTEDKGAYTGATSLPMIKSVGAQWVLCGHSERRALFGDTDETVNAKL 165          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A835YXR2_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR2_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 7.620e-23
Identity = 50/85 (58.82%), Postives = 63/85 (74.12%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKVTTTL 85
            V V VIPP+PFLVPV+    + SG+ + +G QN Y E +GA+TGA+ST MLSSVGCTYVLCGHSERR VF + D  +N+K+   L
Sbjct:   74 VGVVVIPPYPFLVPVQN---AASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVL 154          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A7R9WFT5_9STRA (Triosephosphate isomerase n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WFT5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.960e-23
Identity = 43/80 (53.75%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    2 EVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKV 81
            EV + PPHPF+  V+++VE +    ++VGAQ+++ E+ GA+TG++ST M+ SVGC YVLCGHSERR +F D DE +N+KV
Sbjct:  106 EVVIFPPHPFISRVKDKVEDIG---ITVGAQSVFFEDSGAYTGSVSTNMVKSVGCEYVLCGHSERRTLFNDDDEAINRKV 182          
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Match: A0A7X7YYC1_9BACT (Triosephosphate isomerase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7YYC1_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 1.110e-22
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    1 VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGMLSSVGCTYVLCGHSERRVVFGDSDETVNQKVTTTL 85
            V+VAVIPP  +L  V   V++VS + V+VGAQ+LYIE +GAFTG IS  ML+ VGCTYVLCGHSERR V G+SDE V +KVT  +
Sbjct:   38 VDVAVIPPFVYLQSV---VKAVSSTGVAVGAQDLYIEPKGAFTGEISPAMLTDVGCTYVLCGHSERRHVLGESDEFVGKKVTAAI 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55847.13013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSR6_ECTSI1.840e-3475.31Triosephosphate isomerase n=2 Tax=Ectocarpus TaxID... [more]
A0A7Y5GW52_9DELT1.760e-2460.00Triosephosphate isomerase n=1 Tax=Myxococcales bac... [more]
A0A835ZJI0_9STRA7.480e-2458.02Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
K8Z6D5_NANGC9.650e-2460.49Triosephosphate isomerase (Fragment) n=1 Tax=Nanno... [more]
A0A7S3PY81_9STRA2.140e-2353.75Triosephosphate isomerase n=1 Tax=Chaetoceros debi... [more]
A0A7S4ETX6_CHRCT3.590e-2359.26Triosephosphate isomerase n=1 Tax=Chrysotila carte... [more]
A0A4D9CPZ8_9STRA6.720e-2360.49Triosephosphate isomerase n=1 Tax=Nannochloropsis ... [more]
A0A835YXR2_9STRA7.620e-2358.82Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
A0A7R9WFT5_9STRA8.960e-2353.75Triosephosphate isomerase n=2 Tax=Pseudictyota dub... [more]
A0A7X7YYC1_9BACT1.110e-2262.35Triosephosphate isomerase n=1 Tax=Planctomycetes b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000652Triosephosphate isomerasePFAMPF00121TIMcoord: 1..84
e-value: 2.4E-23
score: 82.8
IPR000652Triosephosphate isomerasePANTHERPTHR21139TRIOSEPHOSPHATE ISOMERASEcoord: 1..83
IPR000652Triosephosphate isomerasePROSITEPS51440TIM_2coord: 1..85
score: 27.289
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..85
e-value: 9.0E-27
score: 95.7
NoneNo IPR availablePANTHERPTHR21139:SF22coord: 1..83
IPR035990Triosephosphate isomerase superfamilySUPERFAMILY51351Triosephosphate isomerase (TIM)coord: 1..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55847contigH-elongata_contig55847:2157..3063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55847.13013.1mRNA_H-elongata_contig55847.13013.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55847 2157..3063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55847.13013.1 ID=prot_H-elongata_contig55847.13013.1|Name=mRNA_H-elongata_contig55847.13013.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
VEVAVIPPHPFLVPVREQVESVSGSHVSVGAQNLYIENQGAFTGAISTGM
LSSVGCTYVLCGHSERRVVFGDSDETVNQKVTTTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000652Triosephosphate_isomerase
IPR013785Aldolase_TIM
IPR035990TIM_sf