prot_H-elongata_contig55754.13006.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55754.13006.1
Unique Nameprot_H-elongata_contig55754.13006.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length384
Homology
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 1.320e-67
Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 373
            V +K  +  K  ++GK++ +K RLVA+G  Q+  V Y    SP PS+ASI++  A A  K   L H+D +QA+  A +DEE+++++P         + +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+VD    +++VI+VDDIL    D+   +   A L KKF  K++G+ +++ GC I R+ +A  L++ Q  Y++SMVE+FDVK  S+IPAT G   L       EGG  E P+ EA+ ++MW +T +R D+  AVRAV R    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG
Sbjct:  782 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1111          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.330e-67
Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 373
            V +K  +  K  ++GK++ +K RLVA+G  Q+  V Y    SP PS+ASI++  A A  K   L H+D +QA+  A +DEE+++++P         + +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+VD    +++VI+VDDIL    D+   +   A L KKF  K++G+ +++ GC I R+ +A  L++ Q  Y++SMVE+FDVK  S+IPAT G   L       EGG  E P+ EA+ ++MW +T +R D+  AVRAV R    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG
Sbjct: 1181 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1510          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 1.780e-67
Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 373
            V +K  +  K  ++GK++ +K RLVA+G  Q+  V Y    SP PS+ASI++  A A  K   L H+D +QA+  A +DEE+++++P         + +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+VD    +++VI+VDDIL    D+   +   A L KKF  K++G+ +++ GC I R+ +A  L++ Q  Y++SMVE+FDVK  S+IPAT G   L       EGG  E P+ EA+ ++MW +T +R D+  AVRAV R    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG
Sbjct: 1161 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1490          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 1.820e-67
Identity = 138/336 (41.07%), Postives = 200/336 (59.52%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 373
            V +K  +  K  ++GK++ +K RLVA+G  Q+  V Y    SP PS+ASI++  A A  K   L H+D +QA+  A +DEE+++++P         + +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+VD    +++VI+VDDIL    D+   +   A L KKF  K++G+ +++ GC I R+ +A  L++ Q  Y++SMVE+FDVK  S+IPAT G   L       EGG  E P+ EA+ ++MW +T +R D+  AVRAV R    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG
Sbjct: 1324 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 1653          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 6.120e-66
Identity = 133/336 (39.58%), Postives = 199/336 (59.23%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 373
            V +K  +  K  ++GK++ +K RLVA+G  Q+  V Y    SP PS+ASI++  A A  K   L H+D +QA+  A +DEE+++++P         + +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+VD    +++VI+VDDIL    D+   +   A L KKF  K++ + +++ GC I R+ +   L++ Q  Y++SMV++FDV+  S+IPA+ GV  L       +GG  E P+ EA+ ++MW +T +R D+  AVRAV R    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG
Sbjct:  336 VSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGV-DLGPKRDDEKGG--EWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 665          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 3.790e-65
Identity = 133/336 (39.58%), Postives = 191/336 (56.85%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 373
            V +K  +  K  +DGK+EK+K RLVA+G  Q+  V Y    SP PS+ASI++  A A  K  +L H+D +QAF  A +DE++++ +P    +    V +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+ D           D IL    D    +  A+ L K F  KD+G+  ++ GC + R+ +A  L++ Q  Y++S+V +FDV+  S IPA+ GV    K +    G   E P+ EA+ ++MW +T +R D+  AVRAV R    P   H KA+VKI+ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG
Sbjct:   45 VSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGG---EWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLAVYVDASY-ADAEDRRSVSG 374          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.240e-63
Identity = 132/326 (40.49%), Postives = 191/326 (58.59%), Query Frame = 0
Query:   47 KVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVS 372
            K  ++GK++  K R VA+G  Q+  +      SP PS+ASI++  A A  K   L H+D +QA+  A +DEE+++++P         + +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+VD    +++VI+VDDIL    D+   +   A L KKF  K++G+ +++ GC I R+  A  L++ Q  Y++SMVE+FDVK  S+IPAT G   L       +GG  E P+ EAV ++MW +T +R D+  AVRAV R    P   H  A+ KI+ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVS
Sbjct:  382 KTNKEGKIDTLKARRVARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDDKGG--EWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDARY-ADTEDRRSVS 701          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.390e-62
Identity = 136/344 (39.53%), Postives = 195/344 (56.69%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLKLAKG 381
            V +K  +  K  ++GK++K+K R+VA+G  Q+  V Y    SP PS+ASI +  A A  K   L H+D +QA   A +DEE++  +P         + +  +AIYGL Q+GR W       +   GFEQ KADP VFRK+VD    +++VI+VDDIL    D+   +   A L KKF  K++G+ +++ GC I R+ +A  L++ Q  Y++SMVE+FDVK  S+IPAT G   L       EGG  E P+ +A+ ++MW +T +R D+  A RAV R    P   H  A+ KI+ YL  T+D GITY  +G GL    Y D+ +    DT  S SG+ L    G
Sbjct:  891 VSSKWCFSWKTNKEGKIDKFKARVVARGFSQLPNVDYFRSSSPCPSSASIMLMLAVANEKGMNLNHWDVKQASPHATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-DLGPKREDEEGG--EWPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGPSVYVDASYA---DTEDSRSGSGLATTVG 1226          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 3.330e-61
Identity = 129/336 (38.39%), Postives = 196/336 (58.33%), Query Frame = 0
Query:   38 VGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSG 373
            V +K  +  KV ++G+++K+K RLVA+G  Q+  V Y    SP PS+ASI++  A A  K   L H+D +QA   A +DEE+++++P         + +   AIYGL Q+ R W       +   GFE+ KAD  VFRK+VD    +++VI+ DDIL    D+   +   A L KKF  K++G+ +++ GC I R+ +A  L++ Q  Y++SM+++FDV+  S+IPAT G   L       EGG  E P+ EA+ ++MW +T +R D+  AVRA  R   +P   H  A+  ++ YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG
Sbjct:  668 VSSKWCFSWKVNKEGRIDKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAHTHATLDEEVFLKLPAGCGDRSYKIVKAEPAIYGLKQSERQWGYLAADTLVENGFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGA-DLGPIREDEEGG--EWPVREAIGSMMWMSTFSRPDVSFAVRAAARHAHSPAERHWDAIQTVLGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSG 997          
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 215 bits (548), Expect = 8.210e-61
Identity = 135/387 (34.88%), Postives = 214/387 (55.30%), Query Frame = 0
Query:    7 DDWRKAEETKMRGMVENCVYKQVARSKDKLLVGTKMIYKRKVGQDGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGELRHFDAEQAFLKADIDEELYIEIPEKYQKF---------PGAVGRLSKAIYGLVQAGRCWNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDKATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESMVEKFDVK--KESKIPATTGVPTLSKANGP----GEGGNEEIPIPEAVRALMWTATMTRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLKL 378
            D+W+KA  ++++ ++ N  +K V +   +  +G + ++  K  + G+V +YK RLVA+G  Q  G+ Y E YSP     S+R   A   A+  E+   D + AFL  +++EE+Y+E+PE  ++             V  L +++YGL QA R WN     ++ + GFE   ADP V+ +  + E E +V ++VDD+L  ++ KA +    A + +KF++KD+G AR+ +G  I  + +   L + Q  Y ES+++KF  +  K    P   GV  L+KA+ P     +   +  P    V +LM+ A  TR D+  AV  ++RF ENPG  H  A +K+++YLL TKD GI Y G   G   EAY+D+D+    D RRSVSG +L L
Sbjct:   79 DEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLML 462          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55754.13006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE1.320e-6741.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JN00_9PHAE1.330e-6741.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZQ8_9PHAE1.780e-6741.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.820e-6741.07Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JC10_9PHAE6.120e-6639.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCG0_9PHAE3.790e-6539.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE2.240e-6340.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE2.390e-6239.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJY0_9PHAE3.330e-6138.39CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6A3Q908_9STRA8.210e-6134.88Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 25..259
e-value: 3.0E-49
score: 167.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..260
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 7..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55754contigH-elongata_contig55754:2671..3833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55754.13006.1mRNA_H-elongata_contig55754.13006.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55754 2671..3833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55754.13006.1 ID=prot_H-elongata_contig55754.13006.1|Name=mRNA_H-elongata_contig55754.13006.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=384bp
MESPEWDDWRKAEETKMRGMVENCVYKQVARSKDKLLVGTKMIYKRKVGQ
DGKVEKYKCRLVAQGLWQVEGVHYTEKYSPTPSTASIRMRFATAAAKDGE
LRHFDAEQAFLKADIDEELYIEIPEKYQKFPGAVGRLSKAIYGLVQAGRC
WNNKFCGNMAAIGFEQRKADPGVFRKVVDCEAEVVVVIHVDDILAHAKDK
ATMDRFAAELGKKFKLKDMGDARYYMGCHITRNRKACELKVDQHLYVESM
VEKFDVKKESKIPATTGVPTLSKANGPGEGGNEEIPIPEAVRALMWTATM
TRLDMMSAVRAVTRFCENPGAAHKKAVVKIMKYLLHTKDWGITYGGQGCG
LCMEAYTDSDFGACLDTRRSVSGAVLKLAKGAIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like