mRNA_H-elongata_contig55705.12998.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55705.12998.1
Unique NamemRNA_H-elongata_contig55705.12998.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: D7G6C6_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C6_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 9.560e-110
Identity = 156/204 (76.47%), Postives = 176/204 (86.27%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFKFDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMERAKRKE 612
            VMHRDLKLAN+ IGA+G LKVGD GLARSFH+NQ++HTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCIL ELL+E+PILPG +EKEQ++LIYS+CGTPTDE+WPDRTELP W  +A AAEE KPRSI + F+FDR  V+LVD LLTLDP  RLSA +AL+HPYFW  PRVV PSEL KF + SCHEFEVK  KE ER +RKE
Sbjct:  170 VMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYANAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKE 373          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A835YIU7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU7_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.970e-70
Identity = 113/205 (55.12%), Postives = 141/205 (68.78%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAF--AKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMERAKR 606
            V+HRDLK ANL I ANG LK+GD GLARS HE+  Q T  VITLWYRPPE+L+R T YG  VDMWSVGCI GE+L    ILPG +E+EQM+LI+ +CGTPT E+WP   +LP WE+    K  + P+ R++   F+  DR  V+L+D LL LDP  R++A +AL+H YF+  P VV P  LP  +  SCHEFE K  +  ERA R
Sbjct:  152 VIHRDLKGANLLINANGCLKIGDFGLARSMHEHMKQLTSKVITLWYRPPELLMRATLYGTDVDMWSVGCIFGEMLQRVAILPGKDEQEQMELIFGLCGTPTPESWPGVAKLPDWESCWKPKVVQRPRERTLQHRFRHLDRNVVDLLDRLLQLDPAKRITATQALDHNYFFDHPAVVAPGGLPPLSFTSCHEFEAKQRQAKERADR 356          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A7S2UWV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV7_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.680e-63
Identity = 98/194 (50.52%), Postives = 136/194 (70.10%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFA-KAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
            ++HRD+K +NL I   G LK+ D GLARS++E Q   T  VITLWYRPPE+LL   +YGP +DMWSVGC+  ELL++ PIL G NE+ Q++LI+ +CGTPT E W     L GW A A K  E P PR +   F+ F++ +++LVD LLTLDP+ R++A++AL+  YFW  P  ++PS+LPK +V S HE++ +
Sbjct:  211 ILHRDIKGSNLLIDNRGYLKIADWGLARSWYEEQPYFTNRVITLWYRPPELLLGAPKYGPPIDMWSVGCLFAELLYKKPILQGRNEQHQLELIFKLCGTPTPENWSGAMRLKGWAANAPKKGEPPHPRVVRQRFQTFEQNSLDLVDKLLTLDPLKRITAEEALDANYFWTEPMPLEPSQLPKLSVTSAHEWDAR 404          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: UPI001CF93EC8 (cyclin-dependent kinase C-2-like isoform X1 n=4 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF93EC8)

HSP 1 Score: 204 bits (520), Expect = 6.230e-60
Identity = 102/201 (50.75%), Postives = 135/201 (67.16%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSF-HENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
            V+HRD+K +NL I   G+LK+ D GLARSF HE+ +  T  VITLWYRPPE+LL TT+YGPAVDMWSVGCI  ELLH  PI PG +E EQ++ I+ +CG P +  WP  +++P +  F      P  R +   F+ FDR+A+EL++ +LTLDPV R+SA  AL+  YFW  P   DP  LPK+   S HEF+ K  ++ +R
Sbjct:  165 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSHEHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKMPWYNNFKPTR--PMKRRVREVFRHFDRHALELLEKMLTLDPVQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 361          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A5P1FFB1_ASPOF (Protein kinase domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FFB1_ASPOF)

HSP 1 Score: 202 bits (513), Expect = 9.520e-60
Identity = 102/194 (52.58%), Postives = 131/194 (67.53%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
            V+HRD+K +NL I  +G+LK+ D GLARSF  + + + T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI  ELLH  PILPG NE EQ+  I+ +CGTP +  WP  T++P +  F  +   P  R +   FK FDR+A+EL++ +LTLDP  R+SA  AL+  YFW  P   DP  LPK+   S HEF+ K
Sbjct:  159 VLHRDIKGSNLLIDNDGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLTKIFELCGTPDEINWPGVTKIPWYNNFKPSR--PMKRRVREVFKHFDRHALELLERMLTLDPSQRISAKDALDAEYFWNDPLPCDPKSLPKYE--SSHEFQTK 348          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A7I8KU39_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KU39_SPIIN)

HSP 1 Score: 204 bits (520), Expect = 1.120e-59
Identity = 105/203 (51.72%), Postives = 137/203 (67.49%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKP--RSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
            V+HRD+K +NL I  +G+LK+ D GLARSF  +Q+ + T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI  ELLH  PILPG NE EQ+  I+ +CGTP +  WP  +++P +  F      PKP  R +   FK FDR+A+EL++ +LTLDP  R+SA  AL+  YFW  P   DP  LPK+   S HEF+ K  ++ +R
Sbjct:  159 VLHRDIKGSNLLIDNDGNLKLADFGLARSFSSDQNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLTKIFELCGTPDEVNWPGVSKIPWYNNFKP----PKPMKRRVREAFKHFDRHALELLERMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 355          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A6V7P679_ANACO (Protein kinase domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7P679_ANACO)

HSP 1 Score: 204 bits (518), Expect = 1.640e-59
Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
            V+HRD+K +NL I   G+LK+ D GLARSF  + + + T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI  ELLH  PILPG NE EQ++ IY +CGTP +  WP  T++P +  F  A   P  R +   FK FDR+A++L++ +LTLDP  R+SA  AL+  YFW  P   DP  LPK+   S HEF+ K
Sbjct:  160 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLNKIYELCGTPDEVNWPGVTKIPWYNNFKPAR--PMKRRVREVFKHFDRHALDLLERMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTK 349          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A4Y7IN15_PAPSO (Protein kinase domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IN15_PAPSO)

HSP 1 Score: 203 bits (516), Expect = 1.740e-59
Identity = 103/201 (51.24%), Postives = 135/201 (67.16%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSF-HENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
            V+HRD+K +NL I   G+LK+ D GLARSF +++ +  T  VITLWYRPPE+LL TT+YGPAVDMWSVGCI  ELLH   ILPG NE EQ++ IY +CG P +  WP  +++P +  F  +   P  R +   FK FDR+A+EL++ +LTLDP  R+SA  AL+  YFW  P   DP  LPKF   S HEF+ K  ++ +R
Sbjct:  159 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKAILPGKNEPEQLNKIYELCGAPDEVNWPGVSKIPWYNNFKPSR--PMKRRVREVFKHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWADPLPCDPKSLPKFE--SSHEFQTKKKRQQQR 355          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A199V881_ANACO (Cyclin-dependent kinase C-2 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199V881_ANACO)

HSP 1 Score: 204 bits (518), Expect = 1.960e-59
Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
            V+HRD+K +NL I   G+LK+ D GLARSF  + + + T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI  ELLH  PILPG NE EQ++ IY +CGTP +  WP  T++P +  F  A   P  R +   FK FDR+A++L++ +LTLDP  R+SA  AL+  YFW  P   DP  LPK+   S HEF+ K
Sbjct:  160 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLNKIYELCGTPDEVNWPGVTKIPWYNNFKPAR--PMKRRVREVFKHFDRHALDLLERMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTK 349          
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A068UN75_COFCA (Protein kinase domain-containing protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068UN75_COFCA)

HSP 1 Score: 200 bits (509), Expect = 2.490e-59
Identity = 98/201 (48.76%), Postives = 137/201 (68.16%), Query Frame = 1
Query:    1 VMHRDLKLANLFIGANGSLKVGDLGLARSF-HENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
            V+HRD+K +NL I  NG+LK+ D GLARSF +++ +  T  VITLWYRPPE+LL  T+YGPAVDMWSVGCI  ELLH  PI PG +E EQ++ I+ +CG+P +  WP+ +++P +  F  +   P  R +   F+ FDR+A++L+D +LTLDP+ R+ A  AL+  YFW  P   DP  LPK+   S HEF+ K  ++ +R
Sbjct:   62 VLHRDIKGSNLLIDNNGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGSPDESNWPEVSKIPWYNNFKPSR--PLKRRLKEVFRHFDRHALDLLDKMLTLDPLKRIEAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C6_ECTSI9.560e-11076.47Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835YIU7_9STRA1.970e-7055.12Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2UWV7_9STRA1.680e-6350.52Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
UPI001CF93EC86.230e-6050.75cyclin-dependent kinase C-2-like isoform X1 n=4 Ta... [more]
A0A5P1FFB1_ASPOF9.520e-6052.58Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A7I8KU39_SPIIN1.120e-5951.72Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A6V7P679_ANACO1.640e-5953.09Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A4Y7IN15_PAPSO1.740e-5951.24Protein kinase domain-containing protein n=2 Tax=P... [more]
A0A199V881_ANACO1.960e-5953.09Cyclin-dependent kinase C-2 n=2 Tax=Ananas comosus... [more]
A0A068UN75_COFCA2.490e-5948.76Protein kinase domain-containing protein n=3 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55705contigH-elongata_contig55705:871..3476 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.9
Seed ortholog evalue1.6e-87
Seed eggNOG ortholog2880.D7G6C6
KEGG koko:K08819
EggNOG free text desc.cyclin-dependent protein serine/threonine kinase activity
EggNOG OGsKOG0600@1,KOG0600@2759
EC2.7.11.22,2.7.11.23
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-10_001350.1
Exons6
Model size612
Cds size609
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930908.1056564-CDS-H-elongata_contig55705:870..9521622930908.1056564-CDS-H-elongata_contig55705:870..952Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 871..952 -
1691679620.074463-CDS-H-elongata_contig55705:870..9521691679620.074463-CDS-H-elongata_contig55705:870..952Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 871..952 -
1622930908.128104-CDS-H-elongata_contig55705:1380..15091622930908.128104-CDS-H-elongata_contig55705:1380..1509Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 1381..1509 -
1691679620.08578-CDS-H-elongata_contig55705:1380..15091691679620.08578-CDS-H-elongata_contig55705:1380..1509Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 1381..1509 -
1622930908.1444707-CDS-H-elongata_contig55705:1819..18901622930908.1444707-CDS-H-elongata_contig55705:1819..1890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 1820..1890 -
1691679620.0946293-CDS-H-elongata_contig55705:1819..18901691679620.0946293-CDS-H-elongata_contig55705:1819..1890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 1820..1890 -
1622930908.159172-CDS-H-elongata_contig55705:2703..28621622930908.159172-CDS-H-elongata_contig55705:2703..2862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 2704..2862 -
1691679620.1163783-CDS-H-elongata_contig55705:2703..28621691679620.1163783-CDS-H-elongata_contig55705:2703..2862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 2704..2862 -
1622930908.180178-CDS-H-elongata_contig55705:3075..31861622930908.180178-CDS-H-elongata_contig55705:3075..3186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 3076..3186 -
1691679620.1349785-CDS-H-elongata_contig55705:3075..31861691679620.1349785-CDS-H-elongata_contig55705:3075..3186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 3076..3186 -
1622930908.1990294-CDS-H-elongata_contig55705:3416..34731622930908.1990294-CDS-H-elongata_contig55705:3416..3473Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 3417..3473 -
1691679620.144342-CDS-H-elongata_contig55705:3416..34731691679620.144342-CDS-H-elongata_contig55705:3416..3473Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55705 3417..3473 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930908.22697-UTR-H-elongata_contig55705:3473..34761622930908.22697-UTR-H-elongata_contig55705:3473..3476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55705 3474..3476 -
1691679620.1527917-UTR-H-elongata_contig55705:3473..34761691679620.1527917-UTR-H-elongata_contig55705:3473..3476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55705 3474..3476 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55705.12998.1prot_H-elongata_contig55705.12998.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55705 871..3473 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55705.12998.1

>prot_H-elongata_contig55705.12998.1 ID=prot_H-elongata_contig55705.12998.1|Name=mRNA_H-elongata_contig55705.12998.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
MHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEV
LLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPT
DETWPDRTELPGWEAFAKAAEEPKPRSIHTHFKFDRYAVELVDNLLTLDP
VNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMERAK
RKE
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mRNA from alignment at H-elongata_contig55705:871..3476-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55705.12998.1 ID=mRNA_H-elongata_contig55705.12998.1|Name=mRNA_H-elongata_contig55705.12998.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2606bp|location=Sequence derived from alignment at H-elongata_contig55705:871..3476- (Himanthalia elongata Himel1 dioecious)
GTGATGCACCGTGACCTGAAGCTGGCGAACCTGTTTATCGGTGCTAACGG TAGCCTAAAGGTGCGTAATAGCGTGTCGTGGTCATAGGTAAGGGCTTCAA CAGTTTCTCCCAGATACCTTGATATTGTGCCTTTTGTTTCTTTACGAAAA CATTTTCCAGCCGAGGTAAGAGTTCTCTTAAAATTGCCCTACTGAACAAG AGTGTCCTACTAATTGAAGCCTTACCAAATGAGAGTGCTATTCGGAATGA GACTGCCCTATTTCGCATCTTTATTTTTTCAACCGACCAGGTTGGAGACT TGGGACTCGCCCGATCTTTTCACGAGAACCAAAGCCAGCACACACCCACA GTCATCACACTATGGTATCGACCACCAGAAGTTCTTCTCCGCACCACGAG GGTGAGAATGGACAATCTGAAGAGTGAAACAGACCAACCGACTATGTTGT TGGGGAAATATTTCCCTACCTTGATGTATCCCAACGGGCATTCTGTGTGA TGCCTCGCAACCGAATCATCATATATAGAACATAGGAAGTGGCGTGTTTT CTGTCCCCCCCCCCTGTCGTTGTAAGGTTCCCGTTCTCCTTTCCCCTCTC CCTTCCTCGCTCAGTACGGCCCTGCAGTGGATATGTGGTCTGTAGGATGT ATTCTAGGCGAGCTGCTTCATGAAAATCCAATTCTACCTGGCAACAATGA GAAAGAACAGATGGATTTGATCTACTCGGTGTGTGGCACTCCCACAGATG AAACATGGCCGGACCGCACAGAGGTAAGAGTACGTGGGGCACGATTACGT TTAAATTAGCGATAATATAACAATGACATTTGCAAAAAGCATACGTAAAG CATACGTAAACCTCTTGATTCCGAAAACATTTTGAGTTGACCTGAGACTG ATAAGATACGATGCAGGGGCAAGAGCAACGGGGTTGGGATCATGTTGATA TCATCAGATTCGAATTGTCCACCCATTTACATGATCGCGCGCCCGTGAGT ACGATCTCTCTAGATGCAAAGAGCTACCATATATGTTATCTTCGGGAAGA ATCCTGGGGTTTATCGGCATCATTACCCCTGTTCACAGCATCGTCCACAT GGACTCGGCTTGAATTCCATTGATATAGCTTATAGCTTCTTTTCCTCGCC ATTTTCGGTGATGATACGGGATGGTATGGTATAGCTTAAAAAAACATTAG GTTGGAGATGGTACATCGTTTTTCAACTCCATGAACCTGAATAAATTTTC ATACTCACCCTTATCGAACTTGACTTCTAATAGTCTCCGGGCAACAATGT CGAGTTATGTGGGTGGAGAGTGTTATGAGAATAATTTGTTGTTGTGTAAT AATCATTCAATTTTCATCCCGTACCCGACTATGTGGTTTATTTCCCCCCA CTTGAAACTAGATGTATCTTTATAAATGATCCGCGAAAAAGCATATATAT GTTTTACTGGTGAATGCTTTTATCGGTAGGGCAGATTTCGTTAAAGCAGT CTCACGATTCCCGTGCCTTAATATTCTTATAATATACACGCATGTTGCTT GTCCCTGATACCTTGTCAACCTGCTTTATTTCAAAGCTTCCAGGGTGGGA AGCATTCGCCAAGGCAGCGGAAGAGCCAAAGCCAAGATCGATTCACACCC ACTTTAAGTAAGTCAATATACGATCGATCTATCACTTTCTTCCCCTTACG ATTCCACGGATTTTGTTAATTCTGTAATTGGGACATGATTTGCGCAAGAT CCCAATCCACAATTTTGGTACCAAAACACTATAGCTTATTTGATATTACA CACGTTATCTAAATGACTAGAACCTGGCTAATCTAAGGGATGCGTGACAA GTTACTTAAAAGGCAAAAATGTGGTCGCTGTGGTTTGTAAGCATGGGAGT CTTGATTCAACCCGTTACCGCTGACAGCCGCACGCCAATATTAAACAGCT CCGACGATTTTCTCCAGGTTTGACCGTTATGCTGTGGAGCTGGTGGATAA TCTTTTGACTCTCGATCCAGTGAATCGATTGTCGGCAGACAAGGCTCTAG AACATCCGTACTTTTGGCAGGCCCCTCGAGTCGTCGACCCCTCAGAGTAA GTGATGTCTGTTAGAGGGTTCAAGATTGTAGCGCCATTGTTTTTCGTTTT ATGCGGTCGCAAGTAGCCATTGTAAGCCATTGTAAAACGAGACCCAATGC CGGTGCGATGTAGCCAATCTCTGCTAGGCGTAAGCAGCTCGATATACTGC AGCCCTTGGGTACTGTTTTGAATGTTGCCTTGAGCAGCAGCATTTGTTTT AACGAAATATATTTTTGCTGAGTTTAGAACATCGTACATGGTATTGTTGC AACAGCACGGGTCTGCAACAACGTGTCATGAGTTGACGGGTCCGTCCGAA AACTACTCATATATTTTTGTCCATTGTACATCCGCAATCACATAATGGTA GTTGTAGTATATATATAGATATGACGTCATATCACTTTCGGACTGCACGA TGACGTCATATCGCGATGTCTCAGGTTACCCAAGTTCAATGTGCTTTCAT GCCACGAATTCGAAGTCAAGAGCGATAAAGAGATGGAAAGAGCAAAGCGG AAAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig55705:871..3476-

>mRNA_H-elongata_contig55705.12998.1 ID=mRNA_H-elongata_contig55705.12998.1|Name=mRNA_H-elongata_contig55705.12998.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig55705:871..3476- (Himanthalia elongata Himel1 dioecious)
ATGCACCGTGACCTGAAGCTGGCGAACCTGTTTATCGGTGCTAACGGTAG
CCTAAAGATGCACCGTGACCTGAAGCTGGCGAACCTGTTTATCGGTGCTA
ACGGTAGCCTAAAGGTTGGAGACTTGGGACTCGCCCGATCTTTTCACGAG
AACCAAAGCCAGCACACACCCACAGTCATCACACTATGGTATCGACCACC
AGAAGTTCTTCTCCGCACCACGAGGGTTGGAGACTTGGGACTCGCCCGAT
CTTTTCACGAGAACCAAAGCCAGCACACACCCACAGTCATCACACTATGG
TATCGACCACCAGAAGTTCTTCTCCGCACCACGAGGTACGGCCCTGCAGT
GGATATGTGGTCTGTAGGATGTATTCTAGGCGAGCTGCTTCATGAAAATC
CAATTCTACCTGGCAACAATGAGAAAGAACAGATGGATTTGATCTACTCG
GTGTGTGGCACTCCCACAGATGAAACATGGCCGGACCGCACAGAGTACGG
CCCTGCAGTGGATATGTGGTCTGTAGGATGTATTCTAGGCGAGCTGCTTC
ATGAAAATCCAATTCTACCTGGCAACAATGAGAAAGAACAGATGGATTTG
ATCTACTCGGTGTGTGGCACTCCCACAGATGAAACATGGCCGGACCGCAC
AGAGCTTCCAGGGTGGGAAGCATTCGCCAAGGCAGCGGAAGAGCCAAAGC
CAAGATCGATTCACACCCACTTTAACTTCCAGGGTGGGAAGCATTCGCCA
AGGCAGCGGAAGAGCCAAAGCCAAGATCGATTCACACCCACTTTAAGTTT
GACCGTTATGCTGTGGAGCTGGTGGATAATCTTTTGACTCTCGATCCAGT
GAATCGATTGTCGGCAGACAAGGCTCTAGAACATCCGTACTTTTGGCAGG
CCCCTCGAGTCGTCGACCCCTCAGAGTTTGACCGTTATGCTGTGGAGCTG
GTGGATAATCTTTTGACTCTCGATCCAGTGAATCGATTGTCGGCAGACAA
GGCTCTAGAACATCCGTACTTTTGGCAGGCCCCTCGAGTCGTCGACCCCT
CAGAGTTACCCAAGTTCAATGTGCTTTCATGCCACGAATTCGAAGTCAAG
AGCGATAAAGAGATGGAAAGAGCAAAGCGGAAAGAGGTTACCCAAGTTCA
ATGTGCTTTCATGCCACGAATTCGAAGTCAAGAGCGATAAAGAGATGGAA
AGAGCAAAGCGGAAAGAG
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