mRNA_H-elongata_contig55705.12998.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: D7G6C6_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C6_ECTSI) HSP 1 Score: 328 bits (842), Expect = 9.560e-110 Identity = 156/204 (76.47%), Postives = 176/204 (86.27%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFKFDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMERAKRKE 612
VMHRDLKLAN+ IGA+G LKVGD GLARSFH+NQ++HTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCIL ELL+E+PILPG +EKEQ++LIYS+CGTPTDE+WPDRTELP W +A AAEE KPRSI + F+FDR V+LVD LLTLDP RLSA +AL+HPYFW PRVV PSEL KF + SCHEFEVK KE ER +RKE
Sbjct: 170 VMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYANAAEEHKPRSIQSKFRFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKERLRRKE 373
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A835YIU7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU7_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.970e-70 Identity = 113/205 (55.12%), Postives = 141/205 (68.78%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAF--AKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMERAKR 606
V+HRDLK ANL I ANG LK+GD GLARS HE+ Q T VITLWYRPPE+L+R T YG VDMWSVGCI GE+L ILPG +E+EQM+LI+ +CGTPT E+WP +LP WE+ K + P+ R++ F+ DR V+L+D LL LDP R++A +AL+H YF+ P VV P LP + SCHEFE K + ERA R
Sbjct: 152 VIHRDLKGANLLINANGCLKIGDFGLARSMHEHMKQLTSKVITLWYRPPELLMRATLYGTDVDMWSVGCIFGEMLQRVAILPGKDEQEQMELIFGLCGTPTPESWPGVAKLPDWESCWKPKVVQRPRERTLQHRFRHLDRNVVDLLDRLLQLDPAKRITATQALDHNYFFDHPAVVAPGGLPPLSFTSCHEFEAKQRQAKERADR 356
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A7S2UWV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV7_9STRA) HSP 1 Score: 211 bits (538), Expect = 1.680e-63 Identity = 98/194 (50.52%), Postives = 136/194 (70.10%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFA-KAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
++HRD+K +NL I G LK+ D GLARS++E Q T VITLWYRPPE+LL +YGP +DMWSVGC+ ELL++ PIL G NE+ Q++LI+ +CGTPT E W L GW A A K E P PR + F+ F++ +++LVD LLTLDP+ R++A++AL+ YFW P ++PS+LPK +V S HE++ +
Sbjct: 211 ILHRDIKGSNLLIDNRGYLKIADWGLARSWYEEQPYFTNRVITLWYRPPELLLGAPKYGPPIDMWSVGCLFAELLYKKPILQGRNEQHQLELIFKLCGTPTPENWSGAMRLKGWAANAPKKGEPPHPRVVRQRFQTFEQNSLDLVDKLLTLDPLKRITAEEALDANYFWTEPMPLEPSQLPKLSVTSAHEWDAR 404
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: UPI001CF93EC8 (cyclin-dependent kinase C-2-like isoform X1 n=4 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF93EC8) HSP 1 Score: 204 bits (520), Expect = 6.230e-60 Identity = 102/201 (50.75%), Postives = 135/201 (67.16%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSF-HENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
V+HRD+K +NL I G+LK+ D GLARSF HE+ + T VITLWYRPPE+LL TT+YGPAVDMWSVGCI ELLH PI PG +E EQ++ I+ +CG P + WP +++P + F P R + F+ FDR+A+EL++ +LTLDPV R+SA AL+ YFW P DP LPK+ S HEF+ K ++ +R
Sbjct: 165 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSHEHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKMPWYNNFKPTR--PMKRRVREVFRHFDRHALELLEKMLTLDPVQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 361
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A5P1FFB1_ASPOF (Protein kinase domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FFB1_ASPOF) HSP 1 Score: 202 bits (513), Expect = 9.520e-60 Identity = 102/194 (52.58%), Postives = 131/194 (67.53%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
V+HRD+K +NL I +G+LK+ D GLARSF + + + T VITLWYRPPE+LL T+YGPAVDMWSVGCI ELLH PILPG NE EQ+ I+ +CGTP + WP T++P + F + P R + FK FDR+A+EL++ +LTLDP R+SA AL+ YFW P DP LPK+ S HEF+ K
Sbjct: 159 VLHRDIKGSNLLIDNDGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLTKIFELCGTPDEINWPGVTKIPWYNNFKPSR--PMKRRVREVFKHFDRHALELLERMLTLDPSQRISAKDALDAEYFWNDPLPCDPKSLPKYE--SSHEFQTK 348
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A7I8KU39_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KU39_SPIIN) HSP 1 Score: 204 bits (520), Expect = 1.120e-59 Identity = 105/203 (51.72%), Postives = 137/203 (67.49%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKP--RSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
V+HRD+K +NL I +G+LK+ D GLARSF +Q+ + T VITLWYRPPE+LL T+YGPAVDMWSVGCI ELLH PILPG NE EQ+ I+ +CGTP + WP +++P + F PKP R + FK FDR+A+EL++ +LTLDP R+SA AL+ YFW P DP LPK+ S HEF+ K ++ +R
Sbjct: 159 VLHRDIKGSNLLIDNDGNLKLADFGLARSFSSDQNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLTKIFELCGTPDEVNWPGVSKIPWYNNFKP----PKPMKRRVREAFKHFDRHALELLERMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 355
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A6V7P679_ANACO (Protein kinase domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7P679_ANACO) HSP 1 Score: 204 bits (518), Expect = 1.640e-59 Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
V+HRD+K +NL I G+LK+ D GLARSF + + + T VITLWYRPPE+LL T+YGPAVDMWSVGCI ELLH PILPG NE EQ++ IY +CGTP + WP T++P + F A P R + FK FDR+A++L++ +LTLDP R+SA AL+ YFW P DP LPK+ S HEF+ K
Sbjct: 160 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLNKIYELCGTPDEVNWPGVTKIPWYNNFKPAR--PMKRRVREVFKHFDRHALDLLERMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTK 349
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A4Y7IN15_PAPSO (Protein kinase domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IN15_PAPSO) HSP 1 Score: 203 bits (516), Expect = 1.740e-59 Identity = 103/201 (51.24%), Postives = 135/201 (67.16%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSF-HENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
V+HRD+K +NL I G+LK+ D GLARSF +++ + T VITLWYRPPE+LL TT+YGPAVDMWSVGCI ELLH ILPG NE EQ++ IY +CG P + WP +++P + F + P R + FK FDR+A+EL++ +LTLDP R+SA AL+ YFW P DP LPKF S HEF+ K ++ +R
Sbjct: 159 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKAILPGKNEPEQLNKIYELCGAPDEVNWPGVSKIPWYNNFKPSR--PMKRRVREVFKHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWADPLPCDPKSLPKFE--SSHEFQTKKKRQQQR 355
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A199V881_ANACO (Cyclin-dependent kinase C-2 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199V881_ANACO) HSP 1 Score: 204 bits (518), Expect = 1.960e-59 Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQH-TPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVK 576
V+HRD+K +NL I G+LK+ D GLARSF + + + T VITLWYRPPE+LL T+YGPAVDMWSVGCI ELLH PILPG NE EQ++ IY +CGTP + WP T++P + F A P R + FK FDR+A++L++ +LTLDP R+SA AL+ YFW P DP LPK+ S HEF+ K
Sbjct: 160 VLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLNKIYELCGTPDEVNWPGVTKIPWYNNFKPAR--PMKRRVREVFKHFDRHALDLLERMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTK 349
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Match: A0A068UN75_COFCA (Protein kinase domain-containing protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068UN75_COFCA) HSP 1 Score: 200 bits (509), Expect = 2.490e-59 Identity = 98/201 (48.76%), Postives = 137/201 (68.16%), Query Frame = 1
Query: 1 VMHRDLKLANLFIGANGSLKVGDLGLARSF-HENQSQHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILGELLHENPILPGNNEKEQMDLIYSVCGTPTDETWPDRTELPGWEAFAKAAEEPKPRSIHTHFK-FDRYAVELVDNLLTLDPVNRLSADKALEHPYFWQAPRVVDPSELPKFNVLSCHEFEVKSDKEMER 597
V+HRD+K +NL I NG+LK+ D GLARSF +++ + T VITLWYRPPE+LL T+YGPAVDMWSVGCI ELLH PI PG +E EQ++ I+ +CG+P + WP+ +++P + F + P R + F+ FDR+A++L+D +LTLDP+ R+ A AL+ YFW P DP LPK+ S HEF+ K ++ +R
Sbjct: 62 VLHRDIKGSNLLIDNNGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGSPDESNWPEVSKIPWYNNFKPSR--PLKRRLKEVFRHFDRHALDLLDKMLTLDPLKRIEAKDALDAEYFWTDPLPCDPKSLPKYE--SSHEFQTKKKRQQQR 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55705.12998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55705.12998.1 >prot_H-elongata_contig55705.12998.1 ID=prot_H-elongata_contig55705.12998.1|Name=mRNA_H-elongata_contig55705.12998.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp MHRDLKLANLFIGANGSLKVGDLGLARSFHENQSQHTPTVITLWYRPPEVback to top mRNA from alignment at H-elongata_contig55705:871..3476- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55705.12998.1 ID=mRNA_H-elongata_contig55705.12998.1|Name=mRNA_H-elongata_contig55705.12998.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2606bp|location=Sequence derived from alignment at H-elongata_contig55705:871..3476- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55705:871..3476- >mRNA_H-elongata_contig55705.12998.1 ID=mRNA_H-elongata_contig55705.12998.1|Name=mRNA_H-elongata_contig55705.12998.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig55705:871..3476- (Himanthalia elongata Himel1 dioecious)back to top |