prot_H-elongata_contig116561.1299.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116561.1299.1
Unique Nameprot_H-elongata_contig116561.1299.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length154
Homology
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A6H5KZ39_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ39_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.020e-23
Identity = 50/120 (41.67%), Postives = 76/120 (63.33%), Query Frame = 0
Query:    1 MLKAEVLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIGWQRNNSTDHPISFLNPLMKTG-SESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGGAGPVGGQEKEYMGCLLEDI 119
            +L+AEV++  LYG  +WS    H   L+  H   LTRCIGW +   +D P+S+   L++ G  E+IE  +R+RR+ F GFV R++D+RLP   + G + GG G  GGQE++++  L ED+
Sbjct:  220 LLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQERDWVSRLGEDL 339          
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A6H5K2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.230e-21
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 MLKAEVLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIGWQRNNSTDHPISFLNPLMKTG-SESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGGA 101
            +L+AEV++  LYG VTW+ + +    L  AHH  L RCIGW++    D P+S+   L+  G  ES+E  +R+RR+ F GFVAR+ D RLP   + GE+ GGA
Sbjct:  177 LLQAEVVETLLYGCVTWNLKPAEYRKLRSAHHFFLLRCIGWKKRERKDRPLSYAKALITAGCDESVEATVRKRRLCFAGFVARMRDERLPKIALLGELQGGA 278          
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A6H5K956_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K956_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.710e-10
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   70 RRRRILFVGFVARIDDARLPNFGMFGEIMGGAGPVGGQEKEYMGCLLEDIKPFGIN----ASQWTIAARDEREWRKTAEQGAKHFMK 152
            R+RR+ F GFV R++D RLP   + G + GG G  GGQE+E++  L +D+  F +     A +W  +A+D   W    E GA   M+
Sbjct:   99 RKRRLCFAGFVMRMEDNRLPKHVLLGAMAGGVGYRGGQEREWVSRLGDDLVAFNMGDEKEAGKWNESAKDPEVWYNKVEDGAAWLMR 185          
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A7M3RE37_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3RE37_SPIER)

HSP 1 Score: 63.2 bits (152), Expect = 2.120e-9
Identity = 46/147 (31.29%), Postives = 69/147 (46.94%), Query Frame = 0
Query:    1 MLKAEVLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIGWQRNNSTDHPISFLNPLMKTGSESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGGAGPVGGQEKEYMGCLLEDIKPFGINASQWTIAARDEREWRKTAEQGA 147
            M KA +L   LYG+ T +  T     L+  H S L R +   R N  D  I   + L +TG  SI  ++R+ ++ + G + R+DD RLP   ++G++  G+   G Q + Y   L   +K   IN   W     D   WR   + GA
Sbjct:    1 MYKAVILPTLLYGAETLTVYTKQARRLNHFHLSCLRRIL---RLNWQDR-IPDTDVLERTGIVSIYTMLRQMQMRWGGHLVRMDDERLPQRLLYGDVATGSRRQGDQIRRYKDTLKSCLKQLQINPINWEELVLDRPTWRGKVKTGA 143          
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A6I9PX76_9TELE (uncharacterized protein LOC104965161 n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9PX76_9TELE)

HSP 1 Score: 63.9 bits (154), Expect = 4.260e-9
Identity = 41/150 (27.33%), Postives = 70/150 (46.67%), Query Frame = 0
Query:    6 VLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIG--WQRNNSTDHPISFLNPLMKTGSESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGGAGPVGGQEKEYMGCLLEDIKPFGINASQWTIAARDEREWRKTAEQGAKHFMKN 153
            V+   LYGS  WS    H+  L+  H   L   +G  W R+  T+  +     L +TGS+S+ + ++ RR+ ++G + R+ D RLP   ++ E+  G+   G     +   +  D+K   I    W   A D  +WR+   +G     K+
Sbjct:  180 VVSVLLYGSEAWSTYARHERELNAFHMRCLRNILGITW-RDKVTNEAV-----LARTGSKSMFQTLKVRRLRWLGQLRRMPDGRLPKDILYSELSAGSRGRGRPLLRFKNVVKLDMKALDIATDNWERLAEDRTKWREQLREGGDRLDKD 323          
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A8J5NCV7_HOMAM (Uncharacterized protein n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5NCV7_HOMAM)

HSP 1 Score: 55.5 bits (132), Expect = 7.700e-7
Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 0
Query:    4 AEVLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIGWQRNNSTDHPISFLNPLMKTGSESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGGAGPVGGQEKE 110
            A  +   LY S TW+P   H   L  +H S L R +G    +   H   +      + + SIE ++ +R + ++G V R+ D RLP   ++G++  G    GGQ+KE
Sbjct:   38 AVCISTLLYASETWTPYKRHSQMLENSHTSGLKRILGISWEDRVTHEELYRG----SNTTSIETMLAKRHLCWLGHVIRMPDHRLPRQILYGKLSHGNRSAGGQKKE 140          
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A7M3RES0_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3RES0_SPIER)

HSP 1 Score: 57.4 bits (137), Expect = 9.970e-7
Identity = 44/153 (28.76%), Postives = 69/153 (45.10%), Query Frame = 0
Query:    1 MLKAEVLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIGWQRNNSTDHPISFLNPLMKTGSESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGGAGPVGGQEKEYMGCLLEDIKPFGINASQWTIAARDEREWRKTAEQGAKHFMKN 153
            M KA +L   LYG+ T +  T     L+  H S   R +   R N  D  I   + L +TG  SI  ++R+ ++ + G + R+DD RLP   ++G++  G+   G Q + Y   L   +K   IN   W         WR+  + G   +  N
Sbjct:  167 MYKAVILPTLLYGAETLTVYTKQARRLNHFHLSCFRRIL---RLNWQDR-IPDTDVLERTGIVSIYTMLRQMQMRWGGHLVRMDDERLPQRLLYGDVATGSRRQGDQIRRYKDTLKSCLKQPQINPINWEELVLARPTWRRKVKTGTVIYEAN 315          
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Match: A0A7M3RG54_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3RG54_SPIER)

HSP 1 Score: 57.0 bits (136), Expect = 1.380e-6
Identity = 41/129 (31.78%), Postives = 63/129 (48.84%), Query Frame = 0
Query:    1 MLKAEVLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIGWQRNNSTDHPISFLNPLMKTGSESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGGAGPVGGQEKEYMGCLLEDIKPFGINASQW 129
            M KA +L   LYG+ T    T     L+  H S L   +   R N  D  I   + L +TG  SI  ++R+ ++ + G + R+DD RLP   ++G++  G+   GGQ ++Y   L   +K   IN   W
Sbjct:  370 MYKAVILPTLLYGAETLIAYTKQARRLNHFHLSCLRHIL---RLNWQDR-IPDTDVLERTGIVSIYTMLRQMQLRWGGHLVRMDDERLPQRLLYGDVATGSRRQGGQIRQYKDTLKSCLKHLQINPINW 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116561.1299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KZ39_9PHAE2.020e-2341.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K2J8_9PHAE1.230e-2145.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K956_9PHAE9.710e-1037.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7M3RE37_SPIER2.120e-931.29Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A6I9PX76_9TELE4.260e-927.33uncharacterized protein LOC104965161 n=1 Tax=Notot... [more]
A0A8J5NCV7_HOMAM7.700e-730.84Uncharacterized protein n=1 Tax=Homarus americanus... [more]
A0A7M3RES0_SPIER9.970e-728.76Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
A0A7M3RG54_SPIER1.380e-631.78Hypothetical protein n=1 Tax=Spirometra erinaceieu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116561contigH-elongata_contig116561:51..512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116561.1299.1mRNA_H-elongata_contig116561.1299.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116561 51..512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116561.1299.1 ID=prot_H-elongata_contig116561.1299.1|Name=mRNA_H-elongata_contig116561.1299.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp
MLKAEVLKATLYGSVTWSPRTSHDGTLHRAHHSLLTRCIGWQRNNSTDHP
ISFLNPLMKTGSESIEEIMRRRRILFVGFVARIDDARLPNFGMFGEIMGG
AGPVGGQEKEYMGCLLEDIKPFGINASQWTIAARDEREWRKTAEQGAKHF
MKN*
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