prot_H-elongata_contig55598.12982.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig55598.12982.1
Unique Name	prot_H-elongata_contig55598.12982.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	257

Homology

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: D7FM46_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM46_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.180e-78
Identity = 145/250 (58.00%), Postives = 165/250 (66.00%), Query Frame = 0

Query:    1 SFGVLIHEVLTQRVPFAGKSVAKVITAVVAKCHRPGYLENEEETMPTGLVKLADVCWTQEPAARPTSLKTVVTELGHIVNAMGGDPRVPLHHAT-GEEAAARPLSKEATSSEGGIS--PDERRIKELEEELRALKMRQRGGGEGTSSKMSSFASEDDGPIIGIPEGEAGGXXXXXXXXACLRTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRT 247
            SFG+L+HEVLTQRVPFAGK+VAKVITAVVAK HRPGYLENEE   P GL KL DVCWTQ+PAARPTSL  +VTELGHI+NA+GGDPR   H  T GE A + P+ +        +S    ERRI +LE+ELRALKM++ G G G                     GE              R ALRALYTATQGP W E+ GWETNDP+LS WYGV+CG GG V  L L SNNL GQ+ REL CLS L+T
Sbjct:  321 SFGILVHEVLTQRVPFAGKNVAKVITAVVAKGHRPGYLENEEAQFPPGLTKLVDVCWTQDPAARPTSLNGIVTELGHILNALGGDPRPQPHTQTAGEAAPSTPIEQNTPGRIPRVSMTEQERRIHDLEQELRALKMQKGGDGGGRGGS-----------------GE--------------RKALRALYTATQGPGWYEQTGWETNDPNLSKWYGVVCGEGGRVTSLHLRSNNLQGQLPRELGCLSRLKT 539

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6H5L5H1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H1_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 1.190e-74
Identity = 146/277 (52.71%), Postives = 171/277 (61.73%), Query Frame = 0

Query:    1 SFGVLIHEVLTQRVPFAGKSVAKVITAVVAKCHRPGYLENEEETMPTGLVKLADVCWTQEPAARPTSLKTVVTELGHIVNAMGGDPRV-PLHHATGEEAAARPLSKEATS-SEGGISPDERRIKELEEELRALKMRQRGGGEGTSSKMS--------------------------SFASEDDGPIIGIPE-GEAGGXXXXXXXXACLRTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTL 248
            SFGVL+HEVLTQRVPFAGK++AKVITAVVAK HRPGYLENEE   P GL KL DVCWTQ+PAARP+SL  +VTELGHI+NA+GGDPR  P     GE A + P+ + +       ++  ERRI +LE+ELRALKM++   G                                  S  S   G     P  GE GG           R ALRALYT+TQGP W E+ GWETNDP+LS WYGV+CG GG V  L L SNNL GQ+ REL CLS+L+TL
Sbjct:  530 SFGVLVHEVLTQRVPFAGKNIAKVITAVVAKGHRPGYLENEEAQFPPGLTKLVDVCWTQDPAARPSSLNVIVTELGHILNALGGDPRPRPYTQTAGEAAPSMPMEQNSGRIPRVSMTEQERRIHDLEQELRALKMQKEADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSRRSSGVGRASMFPSAGEGGGSEE--------RKALRALYTSTQGPGWYEQTGWETNDPNLSKWYGVVCGEGGRVTSLHLRSNNLQGQLPRELGCLSHLKTL 798

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: UPI0012FF6ACA (hypothetical protein n=1 Tax=Marinicella sediminis TaxID=1792834 RepID=UPI0012FF6ACA)

HSP 1 Score: 75.1 bits (183), Expect = 1.640e-12
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0

Query:  179 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDNMLEG 257
            R AL  L+ AT GP W  +Q W  NDP +  W+GV C    +++ L LP N L+GQ+   +  LS+L TLD+S+N L  
Sbjct:   31 RQALVDLHNATGGPNWLNQQNWLDNDPCMDEWFGVQCDGDDNIIGLSLPVNGLNGQIPANITQLSFLETLDISENYLSA 109

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A7X4EIL7_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4EIL7_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 2.750e-10
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 0

Query:  179 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDN 253
            R AL ALY AT GP WR +  W +++P +++W+GV+      V+EL+L  N+L G++  EL  LS+LR L L++N
Sbjct:  123 RVALTALYDATDGPGWRSKTNWLSDEP-MATWHGVVGNVYDRVIELRLQDNDLSGEIPPELGQLSFLRELVLNEN 196

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A8J6BY20_9EUKA (Cyst wall protein, type 1B n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6BY20_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 6.060e-10
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0

Query:  181 ALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRT 247
            AL  LYTA  G  W +  GW T D  + +WYG+ C   G+V +++LP+NNL G+++ ++ C  YL++
Sbjct:   27 ALMNLYTALGGDFWTDNSGWNTGD--VCTWYGIGCNLDGYVTDIRLPANNLTGELTSDIGCFPYLKS 91

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A8J6AXN5_9EUKA (Cyst wall protein, type 1B n=4 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AXN5_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 1.140e-9
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0

Query:  181 ALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRT 247
            AL  LYTA  G  W +  GW T D  + +WYG+ C   G+V +++LP+NNL G+++ ++ C  YL++
Sbjct:   27 ALMNLYTALGGDFWTDNSGWNTGD--VCTWYGIGCNLDGYVTDIRLPANNLTGELTSDIGCFPYLKS 91

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6N8V7X6_9BACT (Uncharacterized protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N8V7X6_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 1.710e-9
Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 0

Query:  181 ALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDN 253
            AL+ALY AT GP WR +  W +++P +++W+GV+      V+EL L  N+L G++  EL  LS+LR L L++N
Sbjct:  224 ALKALYDATDGPGWRSKTNWLSDEP-IATWHGVVGNTYDRVVELHLQDNDLSGEIPPELGQLSFLRELVLNEN 295

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6B1D1G4_9CHLR (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Caldilineaceae bacterium SB0661_bin_32 TaxID=2605255 RepID=A0A6B1D1G4_9CHLR)

HSP 1 Score: 66.2 bits (160), Expect = 1.060e-8
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 0

Query:  179 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDLSDNML 255
            R AL ALY AT G  W+++  W ++ P LS W+GV    GGHV  LKL  N L+G +  +L  L+YL  L L+ N L
Sbjct:  525 RAALVALYRATGGDGWKQKDNWLSDRP-LSDWHGVTTDAGGHVTRLKLGGNQLNGTLP-DLSALTYLEELSLTGNHL 599

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A6I4ZRU8_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZRU8_9CHLR)

HSP 1 Score: 65.1 bits (157), Expect = 2.260e-8
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 0

Query:  179 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELK------LPSNNLHGQVSRELDCLSYLRTLDLSDNMLEG 257
            RTAL ALY AT GP W     W ++ P L  WYGV  G  G V EL       +  N L G++  ELD L+ L+ L LS N L G
Sbjct:  427 RTALVALYNATDGPNWVFNANWLSDRP-LDEWYGVTTGANGRVTELNVSGGGAITGNGLQGRIPAELDSLADLQRLYLSGNRLTG 510

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BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Match: A0A7X3QKG9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3QKG9_9CHLR)

HSP 1 Score: 65.1 bits (157), Expect = 2.740e-8
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 0

Query:  179 RTALRALYTATQGPAWRERQGWETNDPDLSSWYGVICGYGGHVMELK------LPSNNLHGQVSRELDCLSYLRTLDLSDNMLEG 257
            RTAL ALY AT GP W     W ++ P L  WYGV  G  G V EL       +  N L G++  ELD L+ L+ L LS N L G
Sbjct:  427 RTALVALYNATDGPNWVFNANWLSDRP-LDEWYGVTTGANGRVTELNVSGGGAITGNGLQGRIPAELDSLADLQRLYLSGNRLTG 510

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot

BLAST of mRNA_H-elongata_contig55598.12982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FM46_ECTSI	2.180e-78	58.00	Putative Leucine Rich Repeat Protein Kinase n=1 Ta...	[more]
A0A6H5L5H1_9PHAE	1.190e-74	52.71	Protein kinase domain-containing protein n=1 Tax=E...	[more]
UPI0012FF6ACA	1.640e-12	43.04	hypothetical protein n=1 Tax=Marinicella sediminis...	[more]
A0A7X4EIL7_9BACT	2.750e-10	44.00	BIG2 domain-containing protein n=1 Tax=Gemmatimona...	[more]
A0A8J6BY20_9EUKA	6.060e-10	40.30	Cyst wall protein, type 1B n=1 Tax=Carpediemonas m...	[more]
A0A8J6AXN5_9EUKA	1.140e-9	40.30	Cyst wall protein, type 1B n=4 Tax=Carpediemonas m...	[more]
A0A6N8V7X6_9BACT	1.710e-9	43.84	Uncharacterized protein n=2 Tax=Gemmatimonadetes b...	[more]
A0A6B1D1G4_9CHLR	1.060e-8	45.45	Fibronectin type-III domain-containing protein (Fr...	[more]
A0A6I4ZRU8_9CHLR	2.260e-8	44.71	Uncharacterized protein (Fragment) n=1 Tax=Dehaloc...	[more]
A0A7X3QKG9_9CHLR	2.740e-8	44.71	Uncharacterized protein (Fragment) n=1 Tax=Dehaloc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..134
None	No IPR available	GENE3D	1.10.510.10		coord: 1..82 e-value: 4.3E-10 score: 40.8
None	No IPR available	PANTHER	PTHR27000:SF689		coord: 199..257
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 199..257
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 186..256
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 179..257 e-value: 3.8E-21 score: 76.9
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 1..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig55598	contig	H-elongata_contig55598:274..2876 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig55598.12982.1	mRNA_H-elongata_contig55598.12982.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig55598 274..2876 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig55598.12982.1 ID=prot_H-elongata_contig55598.12982.1|Name=mRNA_H-elongata_contig55598.12982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=257bp
SFGVLIHEVLTQRVPFAGKSVAKVITAVVAKCHRPGYLENEEETMPTGLV
KLADVCWTQEPAARPTSLKTVVTELGHIVNAMGGDPRVPLHHATGEEAAA
RPLSKEATSSEGGISPDERRIKELEEELRALKMRQRGGGEGTSSKMSSFA
SEDDGPIIGIPEGEAGGGGEGEGEGACLRTALRALYTATQGPAWRERQGW
ETNDPDLSSWYGVICGYGGHVMELKLPSNNLHGQVSRELDCLSYLRTLDL
SDNMLEG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR011009	Kinase-like_dom_sf