mRNA_H-elongata_contig55583.12979.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55583.12979.1
Unique NamemRNA_H-elongata_contig55583.12979.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: D7G578_ECTSI (Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G578_ECTSI)

HSP 1 Score: 399 bits (1026), Expect = 3.310e-131
Identity = 212/229 (92.58%), Postives = 222/229 (96.94%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            REFLFRVSYLEIYNEQINDLLCPAST+ANVRILE+KKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSV+STLSLVDLAGSESVR ANT GQRQIEGGFINKSLLTLGKVVSML+EE D+GGYIPYRDSKLTRLLQPSLGGNA+ITIICTVT ALLS DETHNTLKFANRAK +KNHAAINEV N+KTLLKKY++E
Sbjct:  181 REFLFRVSYLEIYNEQINDLLCPASTMANVRILESKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVVSTLSLVDLAGSESVRLANTHGQRQIEGGFINKSLLTLGKVVSMLTEEADRGGYIPYRDSKLTRLLQPSLGGNAKITIICTVTGALLSSDETHNTLKFANRAKRMKNHAAINEVSNDKTLLKKYVEE 409          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A835YYJ9_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ9_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.580e-83
Identity = 145/216 (67.13%), Postives = 174/216 (80.56%), Query Frame = 1
Query:   43 YLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGG--RSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGG-------YIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINE 663
            Y+ IYNEQINDLLCPAST  NVRI+ +K+ GV + G K EVVISPQQVYALISAGEAQRH+G+TDANKNSSRSHTIFRM IESR+R    G  RS +STLSLVDLAGSES + +NT+G+RQ+EG FIN+SLLTLG ++  L+EE   G        ++PYRDSKLTRLLQPSLGGNAQI IICTV+PA  + +ET NTLKFA+RAK ++N A +++
Sbjct:  185 YVAIYNEQINDLLCPAST--NVRIVSDKRDGVAVVGNKSEVVISPQQVYALISAGEAQRHIGATDANKNSSRSHTIFRMTIESRARDGGSGKQRSRVSTLSLVDLAGSESAKLSNTRGERQLEGAFINRSLLTLGHIIYKLTEEDRSGRANEDFQKHLPYRDSKLTRLLQPSLGGNAQIAIICTVSPAAANVEETRNTLKFASRAKRMRNTARVSQ 398          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: B8CFH8_THAPS (Kinesin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFH8_THAPS)

HSP 1 Score: 229 bits (585), Expect = 2.220e-71
Identity = 131/237 (55.27%), Postives = 170/237 (71.73%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSE---EGDKGGY-----IPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            RE+L RVSYLEIYNEQI DLL   S  + +RI E++  GV ++G++EE+V  P+ V+AL+  G+ +R VGST  N+ SSRSH++FR+VI     ++  G   +S+LSLVDLAGSESV+   + G RQ EG +INKSLLTLG VV  LSE     DK  +     IPYRDSKLTRLLQPSLGGNA++ I+  ++PAL + +E+HNTLKFA RAK I+ HA I EV +EKTLL+ Y +E
Sbjct:   87 REYLLRVSYLEIYNEQIYDLLALPSVESPLRIFESRTEGVVVRGLREEIVTCPEDVFALLDDGDMKRKVGSTGMNRTSSRSHSVFRLVITQSLGTAVKGPVRISSLSLVDLAGSESVKATGSTGVRQKEGQYINKSLLTLGHVVHKLSEMSSRADKDSFLAKEHIPYRDSKLTRLLQPSLGGNARVCIVANISPALANLEESHNTLKFATRAKRIQQHARITEVADEKTLLRSYREE 323          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: I0YZ29_COCSC (Kinesin-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZ29_COCSC)

HSP 1 Score: 228 bits (581), Expect = 2.560e-70
Identity = 127/233 (54.51%), Postives = 169/233 (72.53%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRS---RSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGD-KGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            RE+L RVSY+E+YNE++NDLL   ST   ++I E+K+ GV + G++E++V S + V  L+  GE  RHVG T  NKNSSRSH+IFRMV+ESRS    S +GG   +S L+LVDLAGSE +     +G R  EG  INKSLLTLG V++ LSE    +GG+IPYRDSKLTR+LQPSLGGNA+  IIC +TPA +  DE+H+TL+FA RAK + N+A +NEV ++  +LK+  +E
Sbjct:  115 REYLVRVSYMELYNEEVNDLLSTDST--KLQIHESKESGVYVAGLREDIVTSVEHVLQLLEEGERSRHVGETRMNKNSSRSHSIFRMVVESRSLDQESEEGGAVWVSVLTLVDLAGSERISKTGAEGLRMKEGASINKSLLTLGTVINKLSEGTQTQGGHIPYRDSKLTRILQPSLGGNAKTAIICNITPAFVHSDESHSTLRFACRAKRVVNNAMVNEVLSDAAVLKRQAKE 345          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A1Y3NP52_PIRSE (Kinesin motor domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NP52_PIRSE)

HSP 1 Score: 225 bits (573), Expect = 1.070e-69
Identity = 131/243 (53.91%), Postives = 175/243 (72.02%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRS-----RSSKG------GRS---VMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            REFL RVSY+EIYNEQI DLL P +T  N+RI E+++ G+ +  +KEE+V S +QV  +I  GE+ RH+ +TD NK+SSRSHTIF+M+IES+S     RSSKG      G S    +S L+L+DL+GSE    A +   R+ EG FINKSLLTLG V+S L+EE  K G+IPYRDSKLTR+LQ SL GNA+I++ICT++PA ++ DE+HNTL FA R K +   A  N+V ++K L++KY +E
Sbjct:   55 REFLLRVSYMEIYNEQIQDLLSPETT--NLRIFEDRRRGIYVSPLKEEIVTSAKQVMRIIQKGESNRHISTTDYNKHSSRSHTIFQMIIESKSQSSSIRSSKGSFYSPKGSSDSVKISQLNLIDLSGSEK---ATSDADRRKEGAFINKSLLTLGNVISKLTEE--KRGHIPYRDSKLTRILQSSLSGNAKISVICTISPAGINADESHNTLNFAKRVKKVATKAHTNQVLDDKALIQKYKKE 290          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A0D2VXK5_CAPO3 (Cenpe protein n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VXK5_CAPO3)

HSP 1 Score: 241 bits (616), Expect = 1.080e-69
Identity = 132/235 (56.17%), Postives = 170/235 (72.34%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKG---------GRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKY 696
            REFL RVSY+EIYNE I DLL P +T  N++I EN    + +  + EEVV+SP ++  L+  GE+ RHVG T+ N++SSRSHTIFRM++ESR R S           G  ++S+L+LVDLAGSE V H   +G R  EGGFINKSLLTLG V+  LS+  ++ G+IPYRDSKLTR+LQPSLGGNA+  I+CT+TPA + CDET +TLKFA RAK I+N   INEV +++ LLK+Y
Sbjct:  124 REFLLRVSYIEIYNEIITDLLKPENT--NLKIRENVSGEIFVSDISEEVVVSPNEILKLMERGESSRHVGETNMNEHSSRSHTIFRMIVESRDRVSAANSPERLSMDGAVLVSSLNLVDLAGSERVGHTGAEGVRLKEGGFINKSLLTLGTVIGKLSDGVNESGHIPYRDSKLTRILQPSLGGNARTAIVCTITPATVHCDETISTLKFATRAKTIRNKPVINEVISDEALLKRY 356          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A7J7PY52_9CHLO (Kinesin-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PY52_9CHLO)

HSP 1 Score: 226 bits (575), Expect = 3.040e-69
Identity = 127/243 (52.26%), Postives = 170/243 (69.96%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESR-------------SRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEE-GDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            REFL RVSY+E+YNE INDLL P +    + I E+K+ GV + G++E++V+SP+QV  L+  GEA RH+G+T  N+ SSRSHT+FRMVIESR               +++ G  ++STL+LVDLAGSE V     +G R  EG  INKSLLTLG V++ LSE    +GG+IPYRDSKLTR+LQPSLGGNA+  IIC +TPA    +E+H+TL+FA RAK + N+A +NEV ++  +LK+   E
Sbjct:  121 REFLLRVSYMELYNEDINDLLAPENL--KLPIHESKENGVYVAGLREDIVVSPEQVLELLREGEANRHIGATKMNEGSSRSHTVFRMVIESRLLKDGMMTEDVPADPAAEAGAILVSTLTLVDLAGSERVAKTGAEGIRMKEGTAINKSLLTLGNVINKLSEGVAAQGGHIPYRDSKLTRILQPSLGGNAKTAIICNITPASCHVEESHSTLRFACRAKRVMNNAVVNEVLSDAAVLKRQASE 361          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A6A0AJF7_HAELA (Kinesin-like protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0AJF7_HAELA)

HSP 1 Score: 228 bits (582), Expect = 5.260e-69
Identity = 125/233 (53.65%), Postives = 170/233 (72.96%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRS---VMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEG-DKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            REFL RVSY+E+YNE++NDLL P +T   V   E+K+ GV + G++E++V  P+ V +L++ GEA RH+G+T  N  SSRSHT+FRMV+ESR R ++G  +   ++STL+LVDLAGSE V     +G R  EG  INKSLLTLG V++ LSE     GG+IPYRDSKLTR+LQPSLGGNA+  IIC +TPA    +E+H+TL+FA RAK + N+A +NEV ++  +LK+  +E
Sbjct:  145 REFLLRVSYMELYNEEVNDLLAPQNTKLPVH--ESKEQGVYVCGLREDIVTCPEAVLSLLAEGEANRHIGATKMNDTSSRSHTVFRMVVESRMRDAEGSDAAAILVSTLTLVDLAGSERVAKTGAEGIRMKEGTAINKSLLTLGNVINKLSEGALSTGGHIPYRDSKLTRILQPSLGGNAKTAIICAMTPAACHVEESHSTLRFACRAKRVVNNAVVNEVLSDAAVLKRQAKE 375          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A1Y1X8E5_9FUNG (Kinesin-domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X8E5_9FUNG)

HSP 1 Score: 224 bits (572), Expect = 1.530e-68
Identity = 128/237 (54.01%), Postives = 171/237 (72.15%), Query Frame = 1
Query:   19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRS-----RSSKGG---RSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            REFL RVSY+EIYNEQI DLL P +T  N+RI E+++ G+ +  +KEE+V S +QV  +I  GE  RH+ +TD NK+SSRSHTIF+M+IES+S     RSSKG    +   S  +L+DL+GSE    A +   R+ EG FINKSLLTLG V+S L+EE  K G+IPYRDSKLTR+LQ SL GNA+I++ICT++PA ++ DE+HNTL FA R K +   A  N+V ++K L++KY +E
Sbjct:   77 REFLLRVSYMEIYNEQIQDLLSPETT--NLRIFEDRRRGIYVSPLKEEIVTSAKQVMRIIQKGETNRHISTTDYNKHSSRSHTIFQMIIESKSQSSSIRSSKGSFYSQKGSSDSNLIDLSGSEK---ATSDADRRKEGAFINKSLLTLGNVISKLTEE--KRGHIPYRDSKLTRILQSSLSGNAKISVICTISPAGINADESHNTLNFAKRVKKVATKAHTNQVLDDKALIQKYKKE 306          
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A1S8VFI3_9FUNG (Kinesin-like protein (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VFI3_9FUNG)

HSP 1 Score: 227 bits (579), Expect = 4.840e-68
Identity = 129/228 (56.58%), Postives = 160/228 (70.18%), Query Frame = 1
Query:   22 EFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
            EFL RVSYLEIYNE I DLL PA+   N++I E     + +  + E VV S  QV   +  GE  RH+G T+ N  SSRSHTIF+MV+ESRSR+ KG    +S L+LVDLAGSE V H   +G R  EGG INKSLLTL  V+  LS+ GDK  +IPYRDSKLTR+LQPS+GGNA   IICT+T A L  DETH+TL+FA+RAK I N   +NE+ +++TLLK+Y +E
Sbjct:   86 EFLLRVSYLEIYNEIIRDLLDPANV--NLKIHETANRDIFVGNLSENVVSSASQVKEYLDIGEGNRHIGETNMNDKSSRSHTIFKMVVESRSRTDKGNSVRVSQLNLVDLAGSERVGHTGAEGIRLKEGGHINKSLLTLSTVIGKLSDGGDKR-HIPYRDSKLTRILQPSIGGNANTAIICTITRAYLHSDETHSTLRFASRAKTITNKPHVNEIVSDETLLKRYRRE 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G578_ECTSI3.310e-13192.58Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YYJ9_9STRA1.580e-8367.13Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
B8CFH8_THAPS2.220e-7155.27Kinesin-like protein (Fragment) n=1 Tax=Thalassios... [more]
I0YZ29_COCSC2.560e-7054.51Kinesin-like protein (Fragment) n=1 Tax=Coccomyxa ... [more]
A0A1Y3NP52_PIRSE1.070e-6953.91Kinesin motor domain-containing protein n=1 Tax=Pi... [more]
A0A0D2VXK5_CAPO31.080e-6956.17Cenpe protein n=3 Tax=Capsaspora owczarzaki (strai... [more]
A0A7J7PY52_9CHLO3.040e-6952.26Kinesin-like protein n=1 Tax=Scenedesmus sp. NREL ... [more]
A0A6A0AJF7_HAELA5.260e-6953.65Kinesin-like protein n=1 Tax=Haematococcus lacustr... [more]
A0A1Y1X8E5_9FUNG1.530e-6854.01Kinesin-domain-containing protein n=1 Tax=Anaeromy... [more]
A0A1S8VFI3_9FUNG4.840e-6856.58Kinesin-like protein (Fragment) n=1 Tax=Batrachoch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55583contigH-elongata_contig55583:1..1683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.7
Seed ortholog evalue6e-110
Seed eggNOG ortholog2880.D7G578
KEGG koko:K11498
GOsGO:0000070,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000779,GO:0000793,GO:0000819,GO:0001932,GO:0001934,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005871,GO:0005874,GO:0005875,GO:0005876,GO:0006810,GO:0006890,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007079,GO:0007080,GO:0007088,GO:0007346,GO:0008017,GO:0008092,GO:0008150,GO:0008608,GO:0009893,GO:0009987,GO:0010562,GO:0010564,GO:0010604,GO:0010965,GO:0015630,GO:0015631,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019220,GO:0019222,GO:0019882,GO:0019884,GO:0019886,GO:0022402,GO:0022607,GO:0030071,GO:0030496,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033674,GO:0034508,GO:0034622,GO:0042325,GO:0042327,GO:0043085,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043515,GO:0043549,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045859,GO:0045860,GO:0045937,GO:0048002,GO:0048193,GO:0048285,GO:0048518,GO:0048522,GO:0050000,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051233,GO:0051234,GO:0051246,GO:0051247,GO:0051276,GO:0051303,GO:0051305,GO:0051310,GO:0051315,GO:0051338,GO:0051347,GO:0051382,GO:0051383,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051726,GO:0051783,GO:0051983,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071824,GO:0071840,GO:0072686,GO:0080090,GO:0098687,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099606,GO:0099607,GO:0140014,GO:1901987,GO:1901990,GO:1902099,GO:1902850,GO:1903047,GO:1905818,GO:1990023
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0242@2759
Ec32 ortholog descriptionCentromeric protein E, putative
Ec32 orthologEc-14_006520.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size705
Cds size705
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55583.12979.1prot_H-elongata_contig55583.12979.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55583 1..1683 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930905.979638-CDS-H-elongata_contig55583:0..271622930905.979638-CDS-H-elongata_contig55583:0..27Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 1..27 -
1691679619.338332-CDS-H-elongata_contig55583:0..271691679619.338332-CDS-H-elongata_contig55583:0..27Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 1..27 -
1622930905.9987295-CDS-H-elongata_contig55583:602..8111622930905.9987295-CDS-H-elongata_contig55583:602..811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 603..811 -
1691679619.357447-CDS-H-elongata_contig55583:602..8111691679619.357447-CDS-H-elongata_contig55583:602..811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 603..811 -
1622930906.0154297-CDS-H-elongata_contig55583:1044..12671622930906.0154297-CDS-H-elongata_contig55583:1044..1267Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 1045..1267 -
1691679619.3682017-CDS-H-elongata_contig55583:1044..12671691679619.3682017-CDS-H-elongata_contig55583:1044..1267Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 1045..1267 -
1622930906.031351-CDS-H-elongata_contig55583:1437..16831622930906.031351-CDS-H-elongata_contig55583:1437..1683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 1438..1683 -
1691679619.379228-CDS-H-elongata_contig55583:1437..16831691679619.379228-CDS-H-elongata_contig55583:1437..1683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55583 1438..1683 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55583.12979.1

>prot_H-elongata_contig55583.12979.1 ID=prot_H-elongata_contig55583.12979.1|Name=mRNA_H-elongata_contig55583.12979.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
MISRLLREFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQG
VKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSR
SSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVV
SMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDET
HNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE
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mRNA from alignment at H-elongata_contig55583:1..1683-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55583.12979.1 ID=mRNA_H-elongata_contig55583.12979.1|Name=mRNA_H-elongata_contig55583.12979.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1683bp|location=Sequence derived from alignment at H-elongata_contig55583:1..1683- (Himanthalia elongata Himel1 dioecious)
ATGATATCTCGCCTCCTTAGGGAGTTCCTATTTCGCGTCTCCTACCTCGA GATCTACAACGAGCAGATCAATGACCTGCTGTGCCCAGCGTCGACCCTCG CGAACGTGCGCATCCTGGAGAACAAGAAGCTCGGGGTGCAGCTGCAAGGG GTCAAGGAGGAGGTAGTAATTAGCCCCCAGCAGGTGTACGCGCTCATCTC GGCGGGCGAGGCTCAGCGCCACGTGGGGTCCACCGACGCCAACAAGGTAG CAAAGACGCTGGCGAGCGAAGCGCAGCTGAACGACGGTCGGGCACCAAAA CTCTCGTAAATTGATTCTCCCCACCAGATCGCCCCCCCCCCCCTCCCTTG CCGAGTATGATATTTTCTCTTCCGTATACGTATCCGTATGATTTGTTTTG ACACTCTCTTTGCCAGAACTCGTCTCGATCGCACACCATCTTCCGCATGG TGATCGAGAGCCGGTCTCGATCGAGCAAGGGCGGCCGCAGCGTGATGAGC ACGCTGAGCCTGGTGGACCTCGCGGGCTCGGAAAGCGTCCGTCACGCGAA CACTCAGGGACAGCGGCAGATCGAAGGAGGCTTCATCAACAAATCGCTCC TGACGCTGGGGAAGGTCGTCAGTATGCTCTCGGAAGAAGGTGGAGACAGC TATTATGGTGGTGATGGTGGTTGGGGTGGAGACGCGGCAATCCATGGACG GGCGAGCGATTTGTGCGATGGATTGCCGCCGAGCCGAGCTAGTTGGCTTG GCTCGGGAATGAATCATAAATTGGTAGAGCGAATGTGTTATGTACTTTTC AATCAACCTAGAGTAACCGCCACCCTCTCCATATTTCCATTGAACGTCTC TGTTGTGCGTTTTTCTCTCCAGGGGACAAAGGGGGATACATCCCCTACCG AGACTCGAAGCTGACGCGGCTGCTGCAGCCCAGTCTCGGAGGCAACGCAC AGATAACGATAATCTGCACGGTCACCCCGGCGCTTCTGAGCTGCGACGAG ACGCACAATACGCTCAAGTTTGCAAACCGCGCCAAGGGGATAAAGAACCA CGCCGCTATTAACGAAGTTCACAACGAGAAGGTACCTCAGCCTCAGCCTT AGCCCGCTTGCTCCGAGTTAGTAATGGTCATGATCTCATGATCTCATGAT TCTGCTCTTTCAATTAACTCTTGCCCTCGTGCTCTTTCAAGATGCGGTGC TCTTTCAAGATGCGGTGCTCGGTGTTAGTTAGACTGAGGGGAAATATATA TATATATTTTGCCCGTGCGTCCCGACGGACAGCATAGTTTAGAGAAAGAC AGTGTCGCCGTGTATTTTGGACGAAGCGGAAGGCTGGAAACCCTCATCGC GACAAATGAAGTGGAAGGCTGGAAACCCTGAGGCCGTTCTGCACTCCTCC CAACCTTCGGGAGGGATATACGCCGTGCGGGCGGATGTGGCTTGTGATGG ATTCCGATGATTTCGCAGTGAAAGGTTGATGTTTCGGCTTGCGATGCTCT GAACAGTCCCATTGACATCAACCTTACGGTGAATTAGTTAGTTGGTTCGT CCGGCTGTTCATGTCGAACTTTCCCTTCCGTTTCCTTTTGTGCAACATGA ACCTTCCCTTCCGTTCTCATATGATATTACACGGACTGTGCTTGTGACGA TCGCAGACGCTCCTGAAGAAGTACCTCCAGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig55583:1..1683-

>mRNA_H-elongata_contig55583.12979.1 ID=mRNA_H-elongata_contig55583.12979.1|Name=mRNA_H-elongata_contig55583.12979.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig55583:1..1683- (Himanthalia elongata Himel1 dioecious)
ATGATATCTCGCCTCCTTAGGGAGTTCCTATTTCGCGTCTCCTACCTCGA
GATCTACAACGAGCAGATCAATGACCTGCTGTGCCCAGCGTCGACCCTCG
CGAACGTGCGCATCCTGGAGAACAAGAAGCTCGGGGTGCAGCTGCAAGGG
GTCAAGGAGGAGGTAGTAATTAGCCCCCAGCAGGTGTACGCGCTCATCTC
GGCGGGCGAGGCTCAGCGCCACGTGGGGTCCACCGACGCCAACAAGATGA
TATCTCGCCTCCTTAGGGAGTTCCTATTTCGCGTCTCCTACCTCGAGATC
TACAACGAGCAGATCAATGACCTGCTGTGCCCAGCGTCGACCCTCGCGAA
CGTGCGCATCCTGGAGAACAAGAAGCTCGGGGTGCAGCTGCAAGGGGTCA
AGGAGGAGGTAGTAATTAGCCCCCAGCAGGTGTACGCGCTCATCTCGGCG
GGCGAGGCTCAGCGCCACGTGGGGTCCACCGACGCCAACAAGAACTCGTC
TCGATCGCACACCATCTTCCGCATGGTGATCGAGAGCCGGTCTCGATCGA
GCAAGGGCGGCCGCAGCGTGATGAGCACGCTGAGCCTGGTGGACCTCGCG
GGCTCGGAAAGCGTCCGTCACGCGAACACTCAGGGACAGCGGCAGATCGA
AGGAGGCTTCATCAACAAATCGCTCCTGACGCTGGGGAAGGTCGTCAGTA
TGCTCTCGGAAGAAGAACTCGTCTCGATCGCACACCATCTTCCGCATGGT
GATCGAGAGCCGGTCTCGATCGAGCAAGGGCGGCCGCAGCGTGATGAGCA
CGCTGAGCCTGGTGGACCTCGCGGGCTCGGAAAGCGTCCGTCACGCGAAC
ACTCAGGGACAGCGGCAGATCGAAGGAGGCTTCATCAACAAATCGCTCCT
GACGCTGGGGAAGGTCGTCAGTATGCTCTCGGAAGAAGGGGACAAAGGGG
GATACATCCCCTACCGAGACTCGAAGCTGACGCGGCTGCTGCAGCCCAGT
CTCGGAGGCAACGCACAGATAACGATAATCTGCACGGTCACCCCGGCGCT
TCTGAGCTGCGACGAGACGCACAATACGCTCAAGTTTGCAAACCGCGCCA
AGGGGATAAAGAACCACGCCGCTATTAACGAAGTTCACAACGAGAAGGGG
ACAAAGGGGGATACATCCCCTACCGAGACTCGAAGCTGACGCGGCTGCTG
CAGCCCAGTCTCGGAGGCAACGCACAGATAACGATAATCTGCACGGTCAC
CCCGGCGCTTCTGAGCTGCGACGAGACGCACAATACGCTCAAGTTTGCAA
ACCGCGCCAAGGGGATAAAGAACCACGCCGCTATTAACGAAGTTCACAAC
GAGAAGACGCTCCTGAAGAAGTACCTCCAGGAGACGCTCCTGAAGAAGTA
CCTCCAGGAG
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