mRNA_H-elongata_contig55583.12979.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: D7G578_ECTSI (Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G578_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 3.310e-131 Identity = 212/229 (92.58%), Postives = 222/229 (96.94%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
REFLFRVSYLEIYNEQINDLLCPAST+ANVRILE+KKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSV+STLSLVDLAGSESVR ANT GQRQIEGGFINKSLLTLGKVVSML+EE D+GGYIPYRDSKLTRLLQPSLGGNA+ITIICTVT ALLS DETHNTLKFANRAK +KNHAAINEV N+KTLLKKY++E
Sbjct: 181 REFLFRVSYLEIYNEQINDLLCPASTMANVRILESKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVVSTLSLVDLAGSESVRLANTHGQRQIEGGFINKSLLTLGKVVSMLTEEADRGGYIPYRDSKLTRLLQPSLGGNAKITIICTVTGALLSSDETHNTLKFANRAKRMKNHAAINEVSNDKTLLKKYVEE 409
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A835YYJ9_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ9_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.580e-83 Identity = 145/216 (67.13%), Postives = 174/216 (80.56%), Query Frame = 1
Query: 43 YLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGG--RSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGG-------YIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINE 663
Y+ IYNEQINDLLCPAST NVRI+ +K+ GV + G K EVVISPQQVYALISAGEAQRH+G+TDANKNSSRSHTIFRM IESR+R G RS +STLSLVDLAGSES + +NT+G+RQ+EG FIN+SLLTLG ++ L+EE G ++PYRDSKLTRLLQPSLGGNAQI IICTV+PA + +ET NTLKFA+RAK ++N A +++
Sbjct: 185 YVAIYNEQINDLLCPAST--NVRIVSDKRDGVAVVGNKSEVVISPQQVYALISAGEAQRHIGATDANKNSSRSHTIFRMTIESRARDGGSGKQRSRVSTLSLVDLAGSESAKLSNTRGERQLEGAFINRSLLTLGHIIYKLTEEDRSGRANEDFQKHLPYRDSKLTRLLQPSLGGNAQIAIICTVSPAAANVEETRNTLKFASRAKRMRNTARVSQ 398
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: B8CFH8_THAPS (Kinesin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFH8_THAPS) HSP 1 Score: 229 bits (585), Expect = 2.220e-71 Identity = 131/237 (55.27%), Postives = 170/237 (71.73%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSE---EGDKGGY-----IPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
RE+L RVSYLEIYNEQI DLL S + +RI E++ GV ++G++EE+V P+ V+AL+ G+ +R VGST N+ SSRSH++FR+VI ++ G +S+LSLVDLAGSESV+ + G RQ EG +INKSLLTLG VV LSE DK + IPYRDSKLTRLLQPSLGGNA++ I+ ++PAL + +E+HNTLKFA RAK I+ HA I EV +EKTLL+ Y +E
Sbjct: 87 REYLLRVSYLEIYNEQIYDLLALPSVESPLRIFESRTEGVVVRGLREEIVTCPEDVFALLDDGDMKRKVGSTGMNRTSSRSHSVFRLVITQSLGTAVKGPVRISSLSLVDLAGSESVKATGSTGVRQKEGQYINKSLLTLGHVVHKLSEMSSRADKDSFLAKEHIPYRDSKLTRLLQPSLGGNARVCIVANISPALANLEESHNTLKFATRAKRIQQHARITEVADEKTLLRSYREE 323
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: I0YZ29_COCSC (Kinesin-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZ29_COCSC) HSP 1 Score: 228 bits (581), Expect = 2.560e-70 Identity = 127/233 (54.51%), Postives = 169/233 (72.53%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRS---RSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGD-KGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
RE+L RVSY+E+YNE++NDLL ST ++I E+K+ GV + G++E++V S + V L+ GE RHVG T NKNSSRSH+IFRMV+ESRS S +GG +S L+LVDLAGSE + +G R EG INKSLLTLG V++ LSE +GG+IPYRDSKLTR+LQPSLGGNA+ IIC +TPA + DE+H+TL+FA RAK + N+A +NEV ++ +LK+ +E
Sbjct: 115 REYLVRVSYMELYNEEVNDLLSTDST--KLQIHESKESGVYVAGLREDIVTSVEHVLQLLEEGERSRHVGETRMNKNSSRSHSIFRMVVESRSLDQESEEGGAVWVSVLTLVDLAGSERISKTGAEGLRMKEGASINKSLLTLGTVINKLSEGTQTQGGHIPYRDSKLTRILQPSLGGNAKTAIICNITPAFVHSDESHSTLRFACRAKRVVNNAMVNEVLSDAAVLKRQAKE 345
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A1Y3NP52_PIRSE (Kinesin motor domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NP52_PIRSE) HSP 1 Score: 225 bits (573), Expect = 1.070e-69 Identity = 131/243 (53.91%), Postives = 175/243 (72.02%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRS-----RSSKG------GRS---VMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
REFL RVSY+EIYNEQI DLL P +T N+RI E+++ G+ + +KEE+V S +QV +I GE+ RH+ +TD NK+SSRSHTIF+M+IES+S RSSKG G S +S L+L+DL+GSE A + R+ EG FINKSLLTLG V+S L+EE K G+IPYRDSKLTR+LQ SL GNA+I++ICT++PA ++ DE+HNTL FA R K + A N+V ++K L++KY +E
Sbjct: 55 REFLLRVSYMEIYNEQIQDLLSPETT--NLRIFEDRRRGIYVSPLKEEIVTSAKQVMRIIQKGESNRHISTTDYNKHSSRSHTIFQMIIESKSQSSSIRSSKGSFYSPKGSSDSVKISQLNLIDLSGSEK---ATSDADRRKEGAFINKSLLTLGNVISKLTEE--KRGHIPYRDSKLTRILQSSLSGNAKISVICTISPAGINADESHNTLNFAKRVKKVATKAHTNQVLDDKALIQKYKKE 290
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A0D2VXK5_CAPO3 (Cenpe protein n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VXK5_CAPO3) HSP 1 Score: 241 bits (616), Expect = 1.080e-69 Identity = 132/235 (56.17%), Postives = 170/235 (72.34%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKG---------GRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKY 696
REFL RVSY+EIYNE I DLL P +T N++I EN + + + EEVV+SP ++ L+ GE+ RHVG T+ N++SSRSHTIFRM++ESR R S G ++S+L+LVDLAGSE V H +G R EGGFINKSLLTLG V+ LS+ ++ G+IPYRDSKLTR+LQPSLGGNA+ I+CT+TPA + CDET +TLKFA RAK I+N INEV +++ LLK+Y
Sbjct: 124 REFLLRVSYIEIYNEIITDLLKPENT--NLKIRENVSGEIFVSDISEEVVVSPNEILKLMERGESSRHVGETNMNEHSSRSHTIFRMIVESRDRVSAANSPERLSMDGAVLVSSLNLVDLAGSERVGHTGAEGVRLKEGGFINKSLLTLGTVIGKLSDGVNESGHIPYRDSKLTRILQPSLGGNARTAIVCTITPATVHCDETISTLKFATRAKTIRNKPVINEVISDEALLKRY 356
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A7J7PY52_9CHLO (Kinesin-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PY52_9CHLO) HSP 1 Score: 226 bits (575), Expect = 3.040e-69 Identity = 127/243 (52.26%), Postives = 170/243 (69.96%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESR-------------SRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEE-GDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
REFL RVSY+E+YNE INDLL P + + I E+K+ GV + G++E++V+SP+QV L+ GEA RH+G+T N+ SSRSHT+FRMVIESR +++ G ++STL+LVDLAGSE V +G R EG INKSLLTLG V++ LSE +GG+IPYRDSKLTR+LQPSLGGNA+ IIC +TPA +E+H+TL+FA RAK + N+A +NEV ++ +LK+ E
Sbjct: 121 REFLLRVSYMELYNEDINDLLAPENL--KLPIHESKENGVYVAGLREDIVVSPEQVLELLREGEANRHIGATKMNEGSSRSHTVFRMVIESRLLKDGMMTEDVPADPAAEAGAILVSTLTLVDLAGSERVAKTGAEGIRMKEGTAINKSLLTLGNVINKLSEGVAAQGGHIPYRDSKLTRILQPSLGGNAKTAIICNITPASCHVEESHSTLRFACRAKRVMNNAVVNEVLSDAAVLKRQASE 361
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A6A0AJF7_HAELA (Kinesin-like protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0AJF7_HAELA) HSP 1 Score: 228 bits (582), Expect = 5.260e-69 Identity = 125/233 (53.65%), Postives = 170/233 (72.96%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRS---VMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEG-DKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
REFL RVSY+E+YNE++NDLL P +T V E+K+ GV + G++E++V P+ V +L++ GEA RH+G+T N SSRSHT+FRMV+ESR R ++G + ++STL+LVDLAGSE V +G R EG INKSLLTLG V++ LSE GG+IPYRDSKLTR+LQPSLGGNA+ IIC +TPA +E+H+TL+FA RAK + N+A +NEV ++ +LK+ +E
Sbjct: 145 REFLLRVSYMELYNEEVNDLLAPQNTKLPVH--ESKEQGVYVCGLREDIVTCPEAVLSLLAEGEANRHIGATKMNDTSSRSHTVFRMVVESRMRDAEGSDAAAILVSTLTLVDLAGSERVAKTGAEGIRMKEGTAINKSLLTLGNVINKLSEGALSTGGHIPYRDSKLTRILQPSLGGNAKTAIICAMTPAACHVEESHSTLRFACRAKRVVNNAVVNEVLSDAAVLKRQAKE 375
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A1Y1X8E5_9FUNG (Kinesin-domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X8E5_9FUNG) HSP 1 Score: 224 bits (572), Expect = 1.530e-68 Identity = 128/237 (54.01%), Postives = 171/237 (72.15%), Query Frame = 1
Query: 19 REFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRS-----RSSKGG---RSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
REFL RVSY+EIYNEQI DLL P +T N+RI E+++ G+ + +KEE+V S +QV +I GE RH+ +TD NK+SSRSHTIF+M+IES+S RSSKG + S +L+DL+GSE A + R+ EG FINKSLLTLG V+S L+EE K G+IPYRDSKLTR+LQ SL GNA+I++ICT++PA ++ DE+HNTL FA R K + A N+V ++K L++KY +E
Sbjct: 77 REFLLRVSYMEIYNEQIQDLLSPETT--NLRIFEDRRRGIYVSPLKEEIVTSAKQVMRIIQKGETNRHISTTDYNKHSSRSHTIFQMIIESKSQSSSIRSSKGSFYSQKGSSDSNLIDLSGSEK---ATSDADRRKEGAFINKSLLTLGNVISKLTEE--KRGHIPYRDSKLTRILQSSLSGNAKISVICTISPAGINADESHNTLNFAKRVKKVATKAHTNQVLDDKALIQKYKKE 306
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Match: A0A1S8VFI3_9FUNG (Kinesin-like protein (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VFI3_9FUNG) HSP 1 Score: 227 bits (579), Expect = 4.840e-68 Identity = 129/228 (56.58%), Postives = 160/228 (70.18%), Query Frame = 1
Query: 22 EFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGVKEEVVISPQQVYALISAGEAQRHVGSTDANKNSSRSHTIFRMVIESRSRSSKGGRSVMSTLSLVDLAGSESVRHANTQGQRQIEGGFINKSLLTLGKVVSMLSEEGDKGGYIPYRDSKLTRLLQPSLGGNAQITIICTVTPALLSCDETHNTLKFANRAKGIKNHAAINEVHNEKTLLKKYLQE 705
EFL RVSYLEIYNE I DLL PA+ N++I E + + + E VV S QV + GE RH+G T+ N SSRSHTIF+MV+ESRSR+ KG +S L+LVDLAGSE V H +G R EGG INKSLLTL V+ LS+ GDK +IPYRDSKLTR+LQPS+GGNA IICT+T A L DETH+TL+FA+RAK I N +NE+ +++TLLK+Y +E
Sbjct: 86 EFLLRVSYLEIYNEIIRDLLDPANV--NLKIHETANRDIFVGNLSENVVSSASQVKEYLDIGEGNRHIGETNMNDKSSRSHTIFKMVVESRSRTDKGNSVRVSQLNLVDLAGSERVGHTGAEGIRLKEGGHINKSLLTLSTVIGKLSDGGDKR-HIPYRDSKLTRILQPSIGGNANTAIICTITRAYLHSDETHSTLRFASRAKTITNKPHVNEIVSDETLLKRYRRE 310 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55583.12979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55583.12979.1 >prot_H-elongata_contig55583.12979.1 ID=prot_H-elongata_contig55583.12979.1|Name=mRNA_H-elongata_contig55583.12979.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp MISRLLREFLFRVSYLEIYNEQINDLLCPASTLANVRILENKKLGVQLQGback to top mRNA from alignment at H-elongata_contig55583:1..1683- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55583.12979.1 ID=mRNA_H-elongata_contig55583.12979.1|Name=mRNA_H-elongata_contig55583.12979.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1683bp|location=Sequence derived from alignment at H-elongata_contig55583:1..1683- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55583:1..1683- >mRNA_H-elongata_contig55583.12979.1 ID=mRNA_H-elongata_contig55583.12979.1|Name=mRNA_H-elongata_contig55583.12979.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig55583:1..1683- (Himanthalia elongata Himel1 dioecious)back to top |