mRNA_H-elongata_contig55545.12973.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: D8LLP9_ECTSI (Zinc binding dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP9_ECTSI) HSP 1 Score: 278 bits (710), Expect = 8.100e-89 Identity = 163/256 (63.67%), Postives = 183/256 (71.48%), Query Frame = 3
Query: 93 DP-SGTVPEAGTWRTSAILDEAFLVGVP--------------RDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGASTG--QILLQLAAARGLESVCLVSNEEEVERATKLGASKAILLKEFKAMRMDDACLVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVETRALAERSLEAAAAGALTLEGTREFELEEVTSAIDAARAPGGGPILLR 809
DP +G AGTWRT A L EA LV VP + G GG V +AAH S S+ATA+R+LEDF K L AGDRVV TGAS+ QILLQLAA+RGLESVCLV++EEE A KLGA KA LLKEFKAMRMD+AC+VADGEGGVLGFTA RALRFRG +VSYAD+SGGGVS+PVAGQIF DT+CRGFSL+RWAS R E R L ERSL AA+ L LEG R+F L E AID R G P+LLR
Sbjct: 130 DPGNGARQAAGTWRTRATLTEASLVKVPIGGSGAAAAGVLEEKGGDGGGVGFEVAAHCSVSVATAIRILEDFVEKELGAGDRVVFTGASSAVAQILLQLAASRGLESVCLVNSEEEAALALKLGAWKATLLKEFKAMRMDNACIVADGEGGVLGFTAARALRFRGCFVSYADLSGGGVSLPVAGQIFSDTKCRGFSLRRWASSRPPSEKRELVERSLGVAASAGLRLEGARDFPLREAALAIDTLRQTGC-PVLLR 384
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: A0A6H5JRW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW4_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.280e-74 Identity = 148/252 (58.73%), Postives = 167/252 (66.27%), Query Frame = 3
Query: 99 SGTVPEAGTWRTSAILDEAFLVGVPRDGA---------------GGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGASTGQILLQLAAARGLESVCLVSNEEEVERATKLGASKAILLKEFKAMRMDDACLVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVETRALAERSLEAAAAGALTLEGTREFELEEVTSAIDAARAPGGGPILLR 809
+G AGTWR+ AIL EA LV VP G GG V +AAH S S+ATA+R+L+DF K L AGDRVV TGAS+ +A AR C EEE A KLGA KA LLKEFKAMRMD+AC+VADGEGGVLGFTA RALRFRG +VSYAD+SGGGVS+PVAGQIF DT+CRGFSL+RWAS R E R L ERSL AA+ L LEG R+F L E AIDA R G P+LLR
Sbjct: 134 NGARQAAGTWRSRAILTEASLVKVPIVGGSGAAAAGVLGEESSDGGGVGVEVAAHCSGSVATAIRILDDFVEKELGAGDRVVFTGASSA-----VAQAR-----CC---EEEAALALKLGAWKATLLKEFKAMRMDNACIVADGEGGVLGFTAARALRFRGCFVSYADLSGGGVSLPVAGQIFSDTKCRGFSLRRWASARPPSEKRDLVERSLGVAASAGLRLEGARDFPLREAALAIDAVRQTGC-PVLLR 371
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: A0A671WYY0_SPAAU (Mitochondrial trans-2-enoyl-CoA reductase n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671WYY0_SPAAU) HSP 1 Score: 92.0 bits (227), Expect = 9.370e-18 Identity = 72/237 (30.38%), Postives = 117/237 (49.37%), Query Frame = 3
Query: 120 GTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGASTG--QILLQLAAARGLESVCLVSNEEEV----ERATKLGASKAI---LLKEFKAMRMDDAC----LVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVET--RALAERSLEAAAAGALTLEGTREFELEEVTSAIDAARAP 785
GTWRT A+L E ++ +P D + + AA + TALR+L DF L+ GD V+ A++G Q ++Q+AAARG+ S+ +V + E +R +GA+ I L+ + + C L +G GG +R L+ G V+Y ++ V++PV+ IF+D + RGF + +W + E R + + G LT E L++ + A+DAA P
Sbjct: 138 GTWRTEAVLAENDVISLPND-----IPLLSAATLGVNPCTALRMLSDFED--LKPGDSVIQNAANSGVGQAVIQIAAARGINSINVVRDRPEFTQLSDRLKAIGATHVIKEEALRRPEIKELFKICPKPKLALNGVGGKSATELLRHLQLGGSMVTYGGMAKQPVTVPVSALIFKDVKVRGFWVTQWKKDHSKDERAFRVMLDELCNLIKQGKLTAPACTEVGLQDYSKALDAAMQP 367
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: A0A671WS76_SPAAU (Mitochondrial trans-2-enoyl-CoA reductase n=14 Tax=Percomorphaceae TaxID=1489872 RepID=A0A671WS76_SPAAU) HSP 1 Score: 92.0 bits (227), Expect = 9.790e-18 Identity = 72/237 (30.38%), Postives = 117/237 (49.37%), Query Frame = 3
Query: 120 GTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGASTG--QILLQLAAARGLESVCLVSNEEEV----ERATKLGASKAI---LLKEFKAMRMDDAC----LVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVET--RALAERSLEAAAAGALTLEGTREFELEEVTSAIDAARAP 785
GTWRT A+L E ++ +P D + + AA + TALR+L DF L+ GD V+ A++G Q ++Q+AAARG+ S+ +V + E +R +GA+ I L+ + + C L +G GG +R L+ G V+Y ++ V++PV+ IF+D + RGF + +W + E R + + G LT E L++ + A+DAA P
Sbjct: 143 GTWRTEAVLAENDVISLPND-----IPLLSAATLGVNPCTALRMLSDFED--LKPGDSVIQNAANSGVGQAVIQIAAARGINSINVVRDRPEFTQLSDRLKAIGATHVIKEEALRRPEIKELFKICPKPKLALNGVGGKSATELLRHLQLGGSMVTYGGMAKQPVTVPVSALIFKDVKVRGFWVTQWKKDHSKDERAFRVMLDELCNLIKQGKLTAPACTEVGLQDYSKALDAAMQP 372
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: A0A8C4F5Y5_DICLA (Mitochondrial trans-2-enoyl-CoA reductase n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4F5Y5_DICLA) HSP 1 Score: 89.7 bits (221), Expect = 7.180e-17 Identity = 71/237 (29.96%), Postives = 117/237 (49.37%), Query Frame = 3
Query: 120 GTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGASTG--QILLQLAAARGLESVCLVSNEEEV----ERATKLGASKAI---LLKEFKAMRMDDAC----LVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVET--RALAERSLEAAAAGALTLEGTREFELEEVTSAIDAARAP 785
GTWRT A+L E ++ +P D + + AA + TA R+L DF L+ GD V+ A++G Q ++Q+AAARGL ++ +V + E +R +GA+ I L+ + + C L +G GG +R L+F G V+Y ++ V++PV+ IF+D + RGF + +W ++ T R + + G LT E L++ + A+D A P
Sbjct: 156 GTWRTEAVLAEDDVISLPND-----IPLLSAATLGVNPCTAFRMLSDFED--LKPGDSVIQNAANSGVGQAVIQIAAARGLNTINVVRDRPEFTQLSDRLKAIGATHVIKEEALRRPEIKELFKTCPKPKLALNGVGGKSATELLRHLQFGGSMVTYGGMAKQPVTVPVSALIFKDVKVRGFWVTQWKKDQSNNGTAFRVMLDELCHLIRQGKLTAPVCTEVGLQDFSKALDTAMLP 385
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: A0A671WS92_SPAAU (Mitochondrial trans-2-enoyl-CoA reductase n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671WS92_SPAAU) HSP 1 Score: 84.3 bits (207), Expect = 2.460e-15 Identity = 60/187 (32.09%), Postives = 98/187 (52.41%), Query Frame = 3
Query: 120 GTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGASTG--QILLQLAAARGLESVCLVSNEEEV----ERATKLGASKAI---LLKEFKAMRMDDAC----LVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRW 641
GTWRT A+L E ++ +P D + + AA + TALR+L DF L+ GD V+ A++G Q ++Q+AAARG+ S+ +V + E +R +GA+ I L+ + + C L +G GG +R L+ G V+Y ++ V++PV+ IF+D + RGF + +W
Sbjct: 111 GTWRTEAVLAENDVISLPND-----IPLLSAATLGVNPCTALRMLSDFED--LKPGDSVIQNAANSGVGQAVIQIAAARGINSINVVRDRPEFTQLSDRLKAIGATHVIKEEALRRPEIKELFKICPKPKLALNGVGGKSATELLRHLQLGGSMVTYGGMAKQPVTVPVSALIFKDVKVRGFWVTQW 290
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: A0A7S0TQL3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TQL3_HEMAN) HSP 1 Score: 73.9 bits (180), Expect = 2.210e-11 Identity = 57/187 (30.48%), Postives = 93/187 (49.73%), Query Frame = 3
Query: 120 GTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGAS--TGQILLQLAAARGLESVCLVSNEEEVERAT----KLGASKAILLKEFKAMRMDDAC-------LVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRW 641
G+W+T A++DEA +V V D + P AA S S + ALR+LEDF L AGD ++ A+ GQ+L+QLAAARG++ + ++ + +E + +G++ + + ++ M + + DG GG G R + G VS+ SG + +P T+ GF L +W
Sbjct: 164 GSWQTHAVVDEAKVVKVRND-----IPPEYAACLSVSASAALRLLEDFEK--LSAGDVIIHNCANGMVGQVLIQLAAARGIKVISVLRAKATLEDLSDHLKSIGSTAVVPEPQLRSHYMQELLADLPAPKIAFDGVGGASGSLIARVMPKGGRMVSFGGASGEPLLLPAE----LGTKVEGFYLSQW 339
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: F8P3W8_SERL9 (PKS_ER domain-containing protein n=2 Tax=Serpula lacrymans var. lacrymans TaxID=341189 RepID=F8P3W8_SERL9) HSP 1 Score: 67.8 bits (164), Expect = 2.760e-9 Identity = 75/264 (28.41%), Postives = 121/264 (45.83%), Query Frame = 3
Query: 114 EAGTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGAS--TGQILLQLAAARGLESVCLVSNEEEVERATK----LGASKAILLKEF--KAMRMDDACLVADGEGGV---LGFTAV---------RALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVETRALAERSLEAAAAGAL--------TLEGTR--EFELEEVTSAIDA-ARAPGGGPILLRV 812
+AGTW T + ++ VPR + + AA + + TA +L DF L GD V+ GA+ GQ+++Q+AAA+GL+++ L+ N ++ T+ LGA+ + E K+ R V + GG LG V R L VSY +S +S+P + IF++ C GF RW +++ E L E + AG L T++G+ E +++ AI A+ G ILL++
Sbjct: 144 QAGTWSTGMNVKPQDILKVPRS-----LNDVEAATITVNPPTAYNMLHDFVQ--LNEGDWVIQNGANGAVGQVVIQIAAAKGLKTINLIRNRNDIASLTEYLSNLGATHVVTYDELSDKSFRQR----VKEWTGGKNIRLGLNCVSGKPTTLMTRLLGQNAHLVSYGAMSKEPLSLPTSLFIFKNLTCHGFWQSRWYDSKSSGEREKLVETLVGLMRAGKLKEPSHEILTIQGSEGDEEASQKIRHAIATLAKGQHGKKILLKM 396
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: A0A8H5C6C4_9AGAR (PKS_ER domain-containing protein n=2 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5C6C4_9AGAR) HSP 1 Score: 64.3 bits (155), Expect = 4.000e-8 Identity = 62/198 (31.31%), Postives = 95/198 (47.98%), Query Frame = 3
Query: 105 TVPEAGTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTGAST--GQILLQLAAARGLESVCLVSNEEEVERA----TKLGASKAILLKEF--KAMRMDDACLVADGE---GGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVE 665
T ++GTW + I+ + VPR A + AA + + TA +L DF L+ GD VV GA++ GQ ++Q+AAA+G++++ LV N E ++ TKLGA+ + E KA+R E GG R L VSY +S +S+P + IF++ GF +W R+A E
Sbjct: 143 TKQQSGTWMSERIVPVVDVAKVPRREA---LTEAQAATLTVNPPTAYNMLHDFVE--LKEGDWVVQNGANSAVGQAVIQIAAAKGIKTINLVRNRENLDELKQTLTKLGATHVLTYDELADKAVREKIKGWTKGKEIRLGGKETTMMARLLGKDAHLVSYGAMSKQPLSLPTSLFIFKNLTAHGFWQSQWYKTRSAEE 335
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Match: M5G0M4_DACPD (NADP-binding protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5G0M4_DACPD) HSP 1 Score: 61.6 bits (148), Expect = 2.820e-7 Identity = 58/214 (27.10%), Postives = 98/214 (45.79%), Query Frame = 3
Query: 105 TVPEAGTWRTSAILDEAFLVGVPRDGAGGCVEPMIAAHASASIATALRVLEDFSPKALEAGDRVVLTG--ASTGQILLQLAAARGLESVCLVSNEEEVERATK----LGASKAILLKEF---------------KAMRMDDACLVADGEGGVLGFTAVRALRFRGFYVSYADVSGGGVSIPVAGQIFRDTRCRGFSLQRWASGRTAVETRALAE 683
+ P+ GTW + + ++ ++ VPR + + AA + + TAL +L F LE G+ V+ G +S GQ ++Q+A RGL+++ LV + E++E+ + LGA + E K +R+ C+ GG R L VSY +S +S+P + IF++ C G+ RW +A E + L E
Sbjct: 124 STPQFGTWTSETLAKQSDIICVPRS-TNSILTEVQAATLTVNPPTALALLTRFVD--LEPGEFVIQNGGNSSVGQAVIQIAHQRGLKTINLVRDREQIEQLREQLRSLGADYVMTYNELGEQSARNTVREWTEGKPIRLGLNCV-----GGKDTTLMARFLGQDAHLVSYGAMSKAPLSLPTSLFIFKNLTCHGYWQSRWYLQHSAEERQQLIE 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55545.12973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55545.12973.1 >prot_H-elongata_contig55545.12973.1 ID=prot_H-elongata_contig55545.12973.1|Name=mRNA_H-elongata_contig55545.12973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp MIAAHASASIATALRVLEDFSPKALEAGDRVVLTGASTGQILLQLAAARGback to top mRNA from alignment at H-elongata_contig55545:1828..3843- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55545.12973.1 ID=mRNA_H-elongata_contig55545.12973.1|Name=mRNA_H-elongata_contig55545.12973.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2016bp|location=Sequence derived from alignment at H-elongata_contig55545:1828..3843- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55545:1828..3843- >mRNA_H-elongata_contig55545.12973.1 ID=mRNA_H-elongata_contig55545.12973.1|Name=mRNA_H-elongata_contig55545.12973.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1230bp|location=Sequence derived from alignment at H-elongata_contig55545:1828..3843- (Himanthalia elongata Himel1 dioecious)back to top |