prot_H-elongata_contig116509.1295.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116509.1295.1
Unique Nameprot_H-elongata_contig116509.1295.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: D7FNC1_ECTSI (Putative heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC1_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 6.160e-28
Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    1 RSNVAGFLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQV 62
            R NVAGFL KAY+IFD PAWS++CGWG  G TVVIR+QVEFA+RILPLFFNHSNLQSFVRQ+
Sbjct:   12 RGNVAGFLVKAYQIFDTPAWSDLCGWGEGGNTVVIRKQVEFAQRILPLFFNHSNLQSFVRQL 73          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: A0A6H5L3K1_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3K1_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.800e-26
Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    1 RSNVAGFLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQV 62
            R NVAGFL KAY+IFD PAWS++CGWG  G TVVIR+QVEFA+ ILPLFFNHSNLQSFVRQ+
Sbjct:   43 RGNVAGFLVKAYQIFDTPAWSDVCGWGEGGNTVVIRKQVEFAQHILPLFFNHSNLQSFVRQL 104          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: W7TL19_9STRA (Hsf-type dna-binding domain containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL19_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 5.390e-16
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 RSNVAGFLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQV 62
            ++ + GFL K Y+IF +    ++CGWG +G+T+VI++  EFA R+LP +F HSN QSFVRQ+
Sbjct:  122 KATIPGFLTKTYEIFSSAEHKDLCGWGARGDTIVIKRVPEFAARVLPRYFKHSNFQSFVRQL 183          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: A0A4D9CUD5_9STRA (HSF_DOMAIN domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUD5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.050e-15
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 RSNVAGFLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQV 62
            ++ + GFL K Y+IF +P   ++CGWG  G T+VI++  EFA R+LP +F HSN QSFVRQ+
Sbjct:   77 KATIPGFLTKTYEIFSSPEHKDLCGWGAGGGTIVIKKVPEFAARVLPRYFKHSNFQSFVRQL 138          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: A0A7S2SUP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUP5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.910e-15
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    4 VAGFLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQV 62
            V GFL KA++IF N A+ ++CGWGR G+TVVI +  +FA  +LP +F HSN  SFVRQ+
Sbjct:   53 VPGFLTKAFEIFSNKAFLDLCGWGRNGQTVVIHRISDFAAAVLPKYFKHSNYASFVRQL 111          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: A0A3R7WAP3_9STRA (HSF_DOMAIN domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WAP3_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.540e-13
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    7 FLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQVQRMG 66
            FL+K Y+IF  P+++ ICGW   G+T++I     F K++LP FF H NL SFVRQ+   G
Sbjct:   26 FLSKTYEIFSTPSFASICGWNATGDTIIIHDPDVFVKQVLPRFFKHRNLPSFVRQLNMYG 85          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: W4H6D0_9STRA (HSF_DOMAIN domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6D0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.340e-13
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    7 FLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQVQRMG 66
            FL+K Y+IF  P+++ ICGW   G+T++I     F K++LP FF H NL SFVRQ+   G
Sbjct:   36 FLSKTYEIFSTPSFASICGWNATGDTIIIHDPDVFVKQVLPRFFKHRNLPSFVRQLNMYG 95          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: A0A024UHW4_9STRA (HSF_DOMAIN domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHW4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 8.380e-13
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    7 FLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQVQRMG 66
            FL+K Y+IF  P+++ ICGW   G+T++I     F K++LP FF H NL SFVRQ+   G
Sbjct:   44 FLSKTYEIFSTPSFASICGWNATGDTIIIHDPDVFVKQVLPRFFKHRNLPSFVRQLNMYG 103          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: A0A6G0XW85_9STRA (HSF_DOMAIN domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW85_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.120e-12
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    7 FLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQVQRMG 66
            FL+K ++IF  P++S ICGW   G+T++I     F K++LP FF H NL SFVRQ+   G
Sbjct:   32 FLSKTFEIFSTPSFSSICGWNATGDTIIIHDPDVFVKQVLPRFFKHRNLPSFVRQLNMYG 91          
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Match: UPI0018D860CB (heat shock factor protein-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D860CB)

HSP 1 Score: 70.5 bits (171), Expect = 1.560e-12
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    2 SNVAGFLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFFNHSNLQSFVRQVQRMG 66
            SNV GFLAK + + D+    E+ GWG  G + V++ Q  FAK ILP FF H+N+ SF+RQ+   G
Sbjct:   11 SNVPGFLAKLWLLVDDATNDELIGWGPSGNSFVVQNQTHFAKDILPKFFKHNNMASFIRQLNMYG 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116509.1295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNC1_ECTSI6.160e-2880.65Putative heat Shock transcription factor n=1 Tax=E... [more]
A0A6H5L3K1_9PHAE1.800e-2679.03HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
W7TL19_9STRA5.390e-1650.00Hsf-type dna-binding domain containing protein n=1... [more]
A0A4D9CUD5_9STRA3.050e-1551.61HSF_DOMAIN domain-containing protein n=1 Tax=Nanno... [more]
A0A7S2SUP5_9STRA4.910e-1555.93Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A3R7WAP3_9STRA6.540e-1348.33HSF_DOMAIN domain-containing protein n=3 Tax=Aphan... [more]
W4H6D0_9STRA8.340e-1348.33HSF_DOMAIN domain-containing protein n=8 Tax=Aphan... [more]
A0A024UHW4_9STRA8.380e-1348.33HSF_DOMAIN domain-containing protein n=3 Tax=Aphan... [more]
A0A6G0XW85_9STRA1.120e-1248.33HSF_DOMAIN domain-containing protein n=1 Tax=Aphan... [more]
UPI0018D860CB1.560e-1247.69heat shock factor protein-like isoform X1 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 45..57
score: 50.33
coord: 7..30
score: 27.74
coord: 58..70
score: 35.82
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 3..70
e-value: 0.0014
score: 4.1
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 7..63
e-value: 3.7E-12
score: 46.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..67
e-value: 2.8E-16
score: 61.6
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 4..63
NoneNo IPR availablePANTHERPTHR10015:SF329HEAT STRESS TRANSCRIPTION FACTOR B-1coord: 4..63
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 3..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116509contigH-elongata_contig116509:1637..1849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116509.1295.1mRNA_H-elongata_contig116509.1295.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116509 1637..1849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116509.1295.1 ID=prot_H-elongata_contig116509.1295.1|Name=mRNA_H-elongata_contig116509.1295.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
RSNVAGFLAKAYKIFDNPAWSEICGWGRKGETVVIRQQVEFAKRILPLFF
NHSNLQSFVRQVQRMGDASL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf