mRNA_H-elongata_contig55281.12943.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: D8LNZ4_ECTSI (Pyridoxal phosphate homeostasis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ4_ECTSI) HSP 1 Score: 219 bits (559), Expect = 4.120e-70 Identity = 104/124 (83.87%), Postives = 117/124 (94.35%), Query Frame = 1
Query: 1 ACESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPNK 372
AC S+ R+RPLGV++QIDTSGE++K+GI H+D+D CLSL+RHLKD+CPALELKGLMTIGAPGDMECFDRL ACRDAVA GLG+E QALELSMGMSGD+EEAIRRGSTNVRVGSTIFGARFYPNK
Sbjct: 128 ACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAVAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 251
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A835YW12_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW12_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.790e-48 Identity = 82/124 (66.13%), Postives = 97/124 (78.23%), Query Frame = 1
Query: 1 ACESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPNK 372
AC +AGR L V++Q+DTSGEE KSG+ D +G +L++H+ + CP LELKGLMTIGAP D ECF+RL ACR VA LGV+ +LELSMGMSGDFEEAI RGST+VRVGSTIFGAR Y NK
Sbjct: 121 ACAAAGRASKLQVYLQVDTSGEETKSGV---DPEGAPTLAKHVVEDCPNLELKGLMTIGAPDDFECFNRLAACRHEVAEALGVDAASLELSMGMSGDFEEAIARGSTSVRVGSTIFGARNYANK 241
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A7S2EMF2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EMF2_TRICV) HSP 1 Score: 140 bits (352), Expect = 2.900e-40 Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 1
Query: 10 SAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPN 369
S G++ LG+++Q++TSGE+ KSG+ + + LSL + +SCP L + GLMTIGAPGD CFD L CR A LGVE LELSMGMSGDFEEAI+RG+T+VRVGSTIFGAR Y N
Sbjct: 11 SEGKKNKLGIYVQVNTSGEDTKSGV--SPGEELLSLLTAVTESCPHLSVDGLMTIGAPGDYGCFDALVQCRRDAAEALGVEESDLELSMGMSGDFEEAIKRGATSVRVGSTIFGARDYSN 128
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A7S2V490_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V490_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.240e-39 Identity = 72/126 (57.14%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 1 ACESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDM--ECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPNK 372
AC + GRE PLGV +Q++TSGE KSG+ D CL L+RH+ +SCP+L+ +GLMTIG GD +CF L CR V+ LG+ + LE+SMGMSGD E A+ GSTNVRVGSTIFGAR Y NK
Sbjct: 119 ACMAIGREAPLGVMVQVNTSGETQKSGVAPED---CLDLARHISESCPSLKFQGLMTIGRLGDPSPDCFQCLLDCRKQVSEALGLGEEELEMSMGMSGDLELALEMGSTNVRVGSTIFGARTYANK 241
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A7R9ZJB5_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZJB5_9STRA) HSP 1 Score: 142 bits (357), Expect = 5.220e-39 Identity = 70/113 (61.95%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 31 LGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPN 369
L +F+QI+TSGEE+KSG+ N+ +L + + D C LELKG+MTIGAPGD++C + L ACRD VAA LG++ LE+SMGMSGDFE AI +GSTNVRVGSTIFGAR Y N
Sbjct: 190 LSIFVQINTSGEESKSGVQPNEA---AALCKQIVDECEHLELKGVMTIGAPGDVDCLESLVACRDDVAAELGIDKDTLEVSMGMSGDFEVAIAKGSTNVRVGSTIFGARDYSN 299
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A7S0XFU7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFU7_9STRA) HSP 1 Score: 140 bits (354), Expect = 5.350e-39 Identity = 70/124 (56.45%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 1 ACESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPNK 372
ACE+ R+ L V+IQ+DTS E+ KSG+L +V + L + + + CP L++KG+MTIGAPGD+ CFD+L CR+ +A L + P L++SMGMSGD+EEAI RG+T+VRVGSTIFGAR YPNK
Sbjct: 134 ACETVSRDC-LYVYIQVDTSLEDTKSGVLAEEV---IPLVQEIINECPNLKIKGVMTIGAPGDLSCFDKLIQCRNDLANYLSINPSELDVSMGMSGDYEEAIVRGATSVRVGSTIFGARIYPNK 253
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A150G956_GONPE (Pyridoxal phosphate homeostasis protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G956_GONPE) HSP 1 Score: 139 bits (350), Expect = 1.490e-38 Identity = 73/127 (57.48%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 1 ACESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAP---GDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPNK 372
A E AGR PL V +Q++TSGEE+K G+ + DGC+ ++RH+ +CP L L GLMTIG P E F L CR VAA LG+ ++LELSMGMSGDFE+AI GSTN+RVGSTIFGAR YP K
Sbjct: 115 AVEQAGRPEPLAVMVQVNTSGEESKYGV---EPDGCVDVARHIAKNCPRLRLAGLMTIGQPDYSSRPENFSCLADCRRRVAAELGLPDESLELSMGMSGDFEQAIEMGSTNIRVGSTIFGAREYPAK 238
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A7S2NUX5_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NUX5_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.660e-38 Identity = 70/121 (57.85%), Postives = 94/121 (77.69%), Query Frame = 1
Query: 7 ESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPN 369
E+AG + LGV+IQ++TSGE++KSG+ + ++ +SL++ + CP L+ +GLMTIGAPGD+ CFD+L R +A LGV+ +LELSMGMSGDFEEAI+RG+TNVRVGSTIFG R Y N
Sbjct: 178 ENAG-DYKLGVYIQVNTSGEDSKSGV--SSIEDVISLAKDIHAQCPNLDFQGLMTIGAPGDVSCFDKLVQYRAELAQELGVDSSSLELSMGMSGDFEEAIKRGATNVRVGSTIFGQRDYSN 295
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A7S4VXG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VXG3_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.850e-38 Identity = 69/117 (58.97%), Postives = 91/117 (77.78%), Query Frame = 1
Query: 22 ERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALELKGLMTIGAPGDMECFDRLCACRDAVAAGLGVEPQ-ALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPN 369
++ LG+++Q++TSGEE+KSG+ ++V +L+ + +CP L++ GLMTIGAPGD CFD L +CR VA LG+E + +LELSMGMSGDFEEAI RGST+VRVGSTIFGAR Y N
Sbjct: 91 KKRLGIYLQVNTSGEESKSGVTPDEVS---NLAVEISTNCPQLQILGLMTIGAPGDFTCFDSLVSCRTDVANALGLESEKSLELSMGMSGDFEEAIARGSTSVRVGSTIFGARDYSN 204
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Match: A0A7R9Y898_9VIRI (Pyridoxal phosphate homeostasis protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y898_9VIRI) HSP 1 Score: 137 bits (345), Expect = 3.660e-38 Identity = 73/128 (57.03%), Postives = 92/128 (71.88%), Query Frame = 1
Query: 1 ACESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHL-KDSCPALELKGLMTIGAP---GDMECFDRLCACRDAVAAGLGVEPQALELSMGMSGDFEEAIRRGSTNVRVGSTIFGARFYPNK 372
ACE+AGR LGV +Q++TSGEE+K+G+ + + L++H+ ++CP LEL GLMTIG P E F+ L CR VAA L ++ AL+LSMGMSGDFE A+R GSTNVRVGSTIFGAR YPNK
Sbjct: 90 ACENAGRADKLGVMVQVNTSGEESKAGV--EPGEAAVELAKHIVSEACPNLELLGLMTIGMPDYTSKPENFECLARCRAEVAAALALDEDALDLSMGMSGDFEAAVRMGSTNVRVGSTIFGARSYPNK 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55281.12943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55281.12943.1 >prot_H-elongata_contig55281.12943.1 ID=prot_H-elongata_contig55281.12943.1|Name=mRNA_H-elongata_contig55281.12943.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp ACESAGRERPLGVFIQIDTSGEEAKSGILHNDVDGCLSLSRHLKDSCPALback to top mRNA from alignment at H-elongata_contig55281:2740..3135+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55281.12943.1 ID=mRNA_H-elongata_contig55281.12943.1|Name=mRNA_H-elongata_contig55281.12943.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=396bp|location=Sequence derived from alignment at H-elongata_contig55281:2740..3135+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55281:2740..3135+ >mRNA_H-elongata_contig55281.12943.1 ID=mRNA_H-elongata_contig55281.12943.1|Name=mRNA_H-elongata_contig55281.12943.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=792bp|location=Sequence derived from alignment at H-elongata_contig55281:2740..3135+ (Himanthalia elongata Himel1 dioecious)back to top |