prot_H-elongata_contig55265.12938.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig55265.12938.1
Unique Name	prot_H-elongata_contig55265.12938.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	87

Homology

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: D8LAX2_ECTSI (Peptide-methionine (R)-S-oxide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX2_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.340e-42
Identity = 64/84 (76.19%), Postives = 70/84 (83.33%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            ++  SGCGWPAFDKCFKG++VT  DNAYGM+RVEI+C  CGGHLGHVF GERMT TNERHCVNS SVKFQ G    GLEEDKVV
Sbjct:   71 SKFKSGCGWPAFDKCFKGAVVTNTDNAYGMQRVEIVCAKCGGHLGHVFEGERMTSTNERHCVNSVSVKFQKGPIPEGLEEDKVV 154

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: F2URT4_SALR5 (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2URT4_SALR5)

HSP 1 Score: 137 bits (345), Expect = 1.040e-39
Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            A+ +SGCGWPAFDKC+KG++ T  DN++GMRRVEI+CGACGGHLGHVF GERMT TNERHCVNS S++F  G    G +E+KV 
Sbjct:   69 AKFNSGCGWPAFDKCYKGAVTTHVDNSFGMRRVEIVCGACGGHLGHVFEGERMTDTNERHCVNSVSIRFVKGVEPSGADEEKVT 152

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: A0A0G4FGB5_9ALVE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FGB5_9ALVE)

HSP 1 Score: 134 bits (338), Expect = 8.910e-39
Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            A+  SGCGWPAFDKCFKGS+VT+ D + GM R+EIMCG CGGHLGHVF GERMT TNERHCVNS SVKF       GLEE KVV
Sbjct:   61 AKFDSGCGWPAFDKCFKGSVVTERDASMGMVRIEIMCGKCGGHLGHVFEGERMTSTNERHCVNSVSVKFVDEPVPAGLEEAKVV 144

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: A9V0Z0_MONBE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V0Z0_MONBE)

HSP 1 Score: 129 bits (325), Expect = 8.960e-37
Identity = 56/84 (66.67%), Postives = 66/84 (78.57%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            A+ +SGCGWPAFDKC+ G++ T  DN++GMRRVEI+C AC GHLGHVF GER T TNERHCVNS SV++  G P  GL E KVV
Sbjct:   63 AKFASGCGWPAFDKCYAGAVKTHVDNSFGMRRVEIVCAACDGHLGHVFEGERFTETNERHCVNSVSVRYVEGEPDPGLTEAKVV 146

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: A0A830I253_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I253_9CHLO)

HSP 1 Score: 130 bits (328), Expect = 1.750e-36
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            ++  SGCGWPAFDKC+KG ++T+ D+  GMRRVEIMCG CGGHLGHVF  E  TPT ERHCVNS SVK+  G P  GLEE K V
Sbjct:  123 SKFKSGCGWPAFDKCYKGGVITEVDSTMGMRRVEIMCGNCGGHLGHVFENEGFTPTMERHCVNSISVKYNAGEPPSGLEEAKAV 206

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: A0A835YX10_9STRA (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX10_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.150e-36
Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            A+ +SGCGWPAFDKC+ GS+VT+ DN++G RRVEI+C  CGGHLGHVF GERMTPTNERHCVNSASV F  G     +EE KV+
Sbjct:   70 AKFNSGCGWPAFDKCYHGSVVTEVDNSWG-RRVEILCAKCGGHLGHVFEGERMTPTNERHCVNSASVTFIKGEAPKDVEESKVL 152

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: A0A0G4EFY5_VITBC (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFY5_VITBC)

HSP 1 Score: 129 bits (323), Expect = 2.570e-36
Identity = 56/84 (66.67%), Postives = 65/84 (77.38%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            A+  SGCGWPAFDKC+K S+ T+ D+++GM R+EIMC  CGGHLGHVF GER T TNERHCVNS SVK+  GAPS  LEE K  
Sbjct:   75 AKFDSGCGWPAFDKCYKESVYTETDSSFGMIRIEIMCANCGGHLGHVFTGERFTDTNERHCVNSVSVKYVKGAPSPPLEEAKCT 158

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: A0A6T7Y0U2_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A6T7Y0U2_9CHLO)

HSP 1 Score: 129 bits (325), Expect = 1.020e-35
Identity = 56/84 (66.67%), Postives = 65/84 (77.38%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            ++ +SGCGWPAFDKC+ GS+ T+ D+  GMRR+EIMC  C GHLGHVF GERMTPTNERHCVNS S KF  G P   L+EDKV 
Sbjct:  113 SKFNSGCGWPAFDKCYVGSVKTEIDSTMGMRRIEIMCAKCDGHLGHVFEGERMTPTNERHCVNSVSTKFVEGEPPVPLDEDKVA 196

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: C1EJ82_MICCC (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EJ82_MICCC)

HSP 1 Score: 124 bits (311), Expect = 1.130e-34
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            ++ +SGCGWPAFDKC+KG+++T+ D  +GM+RVEIMCGAC GHLGHVF  E  TPT ERHCVNS SV ++ G P   LEE+K  
Sbjct:   61 SKFNSGCGWPAFDKCYKGALITETDMTFGMKRVEIMCGACDGHLGHVFENEGFTPTMERHCVNSVSVLYKEGPPPTPLEEEKCT 144

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BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Match: R7QFE0_CHOCR (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFE0_CHOCR)

HSP 1 Score: 125 bits (315), Expect = 1.260e-34
Identity = 59/84 (70.24%), Postives = 65/84 (77.38%), Query Frame = 0

Query:    3 AELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVFVGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV 86
            A+  SGCGWPAFDKC+KGSI T+ D + GM+RVEIMCGAC GHLGHVF GE MTPTNERHCVNS S+KF  G      EE KVV
Sbjct:  116 AKFQSGCGWPAFDKCYKGSIRTETDASLGMKRVEIMCGACDGHLGHVFEGEGMTPTNERHCVNSVSIKFVDGKVE--KEEVKVV 197

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot

BLAST of mRNA_H-elongata_contig55265.12938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LAX2_ECTSI	1.340e-42	76.19	Peptide-methionine (R)-S-oxide reductase n=2 Tax=E...	[more]
F2URT4_SALR5	1.040e-39	67.86	Peptide-methionine (R)-S-oxide reductase n=1 Tax=S...	[more]
A0A0G4FGB5_9ALVE	8.910e-39	72.62	Peptide-methionine (R)-S-oxide reductase n=1 Tax=C...	[more]
A9V0Z0_MONBE	8.960e-37	66.67	Peptide-methionine (R)-S-oxide reductase n=1 Tax=M...	[more]
A0A830I253_9CHLO	1.750e-36	66.67	Peptide-methionine (R)-S-oxide reductase n=1 Tax=P...	[more]
A0A835YX10_9STRA	2.150e-36	69.05	Peptide-methionine (R)-S-oxide reductase n=1 Tax=T...	[more]
A0A0G4EFY5_VITBC	2.570e-36	66.67	Peptide-methionine (R)-S-oxide reductase n=1 Tax=V...	[more]
A0A6T7Y0U2_9CHLO	1.020e-35	66.67	Peptide-methionine (R)-S-oxide reductase n=1 Tax=P...	[more]
C1EJ82_MICCC	1.130e-34	61.90	Peptide-methionine (R)-S-oxide reductase n=1 Tax=M...	[more]
R7QFE0_CHOCR	1.260e-34	70.24	Peptide-methionine (R)-S-oxide reductase n=1 Tax=C...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.170.150.20		coord: 1..83 e-value: 6.4E-27 score: 95.8
None	No IPR available	PANTHER	PTHR46081:SF1	PEPTIDE METHIONINE SULFOXIDE REDUCTASE 2	coord: 4..73
IPR002579	Peptide methionine sulphoxide reductase MrsB	PFAM	PF01641	SelR	coord: 4..73 e-value: 1.1E-25 score: 90.1
IPR002579	Peptide methionine sulphoxide reductase MrsB	PROSITE	PS51790	MSRB	coord: 1..74 score: 32.838
IPR028427	Peptide methionine sulfoxide reductase	PANTHER	PTHR46081	FAMILY NOT NAMED	coord: 4..73
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 4..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig55265	contig	H-elongata_contig55265:234..851 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig55265.12938.1	mRNA_H-elongata_contig55265.12938.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig55265 234..851 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig55265.12938.1 ID=prot_H-elongata_contig55265.12938.1|Name=mRNA_H-elongata_contig55265.12938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
SGAELSSGCGWPAFDKCFKGSIVTKEDNAYGMRRVEIMCGACGGHLGHVF
VGERMTPTNERHCVNSASVKFQPGAPSGGLEEDKVV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002579	Met_Sox_Rdtase_MsrB
IPR028427	Met_Sox_Rdtase
IPR011057	Mss4-like_sf