prot_H-elongata_contig55202.12928.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55202.12928.1
Unique Nameprot_H-elongata_contig55202.12928.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
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BLAST of mRNA_H-elongata_contig55202.12928.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.140e-24
Identity = 95/303 (31.35%), Postives = 102/303 (33.66%), Query Frame = 0 
Query:    1 MDEESEEYVNMKYLRDDETPTPWPINDLARAPVSNLGFYPASEFGVLTKLIQQ---------------------------------------------------------------------------------------------------------------------------VRELMRTQVFIEAQQGRFVVALSLQEAESLRGCLHLAGRGNGL------------------DASWGY------------------------------------------LREAWFAEVRACRRRQQV 120
            MD++ EEYV MKY RDDE P  W I DL+    S LGFYPAS+FGVLTKLIQQ                                                                                                                           VRELMRTQ FIEAQQGRFVVALSLQEAE LRGCLHL+G+  GL                  DASWGY                                          LREAWF +VRACRRRQQV
Sbjct: 4066 MDDDPEEYVQMKYSRDDEVPKGWAIRDLSTPVASKLGFYPASDFGVLTKLIQQPKHIVFPKAMHVSRNHYKQSWSFKTFRRIKNVIVLMDWVPDVTALKPEPPPVGRQVTAEQDQLLKSAFSLLDFDGDGKLGENEFRTLLRALDVDVDNPTTGRASLVAIAKAAGVHSPFVTYQQVRELMRTQAFIEAQQGRFVVALSLQEAEHLRGCLHLSGKCTGLVRERPTTAALRLTDGTCLDASWGYNEPPPYQRKVAEACFRFMDSDARFADRDLDMLLRGVQDNEKYLREAWFVDVRACRRRQQV 4368
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BLAST of mRNA_H-elongata_contig55202.12928.1 vs. uniprot
Match: A0A835ZBK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK9_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.910e-11
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0 
Query:    3 EESEEYVNMKYLRDDETPTPWPINDLARAPVSNLGFYPASEFGVLTKLIQQVREL 57
            +E +++V  KY RDDETP PWPI+ LA     ++GFY ASEFGVLTKLIQQ + +
Sbjct:    4 QEPDDFVKQKYSRDDETPKPWPISKLADYKPDDMGFYAASEFGVLTKLIQQPKHM 58
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55202.12928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRI4_ECTSI1.140e-2431.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZBK9_9STRA5.910e-1158.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55202contigH-elongata_contig55202:2691..3855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55202.12928.1mRNA_H-elongata_contig55202.12928.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55202 2691..3855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55202.12928.1 ID=prot_H-elongata_contig55202.12928.1|Name=mRNA_H-elongata_contig55202.12928.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
MDEESEEYVNMKYLRDDETPTPWPINDLARAPVSNLGFYPASEFGVLTKL
IQQVRELMRTQVFIEAQQGRFVVALSLQEAESLRGCLHLAGRGNGLDASW
GYLREAWFAEVRACRRRQQVGRPRL*
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