mRNA_H-elongata_contig55184.12926.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1A7FCD (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1A7FCD) HSP 1 Score: 88.6 bits (218), Expect = 3.490e-17 Identity = 54/184 (29.35%), Postives = 97/184 (52.72%), Query Frame = 1
Query: 7 HRKGDGSKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVP---GLHVVTTRVAEISSDAEQVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELAL 549
H+ D +++L + +++I D QP VV++P F L+ + LD +P G+ V + + A + K +L LTTD WT+ G Y+ +T ++ + +F +N ITL+ HT++ + E L ++++ + T+TTD AAN+KKA + + EW C+AH ++L +
Sbjct: 98 HKHKDNRQKELRKFLTDWIIDDLQPL-YVVQSPLFCRLI--SELDPAFIMPDEKGIKKVISNAYNYTLPA-LIKKIKLEAKNISLTTDMWTSRGGQGYIGITCSYV-DSNFNLNEITLTVNYVRYPHTAQHITESLEEILEKWNLRDKVFTITTDNAANMKKAISNMNAVEWQECSAHILQLII 276
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001F8DAAAB (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8DAAAB) HSP 1 Score: 87.0 bits (214), Expect = 4.690e-17 Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 1
Query: 46 AVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTR-VAEISSDAEQVIKAELRGTRP-GLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLA-EMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELALK 552
A+ V +D QP VV + + T L+ +P +++ + + E S A + + L T LTTD WT++ +YM +T HFI +G F +TLS E +HTSE LA EM + I I +TTD AANIKKA +L++ H CAAHT+ L ++
Sbjct: 131 ALLRMVCVDFQPLQVVENKGFQEY---TRALNPNYELPSRKILSEKLIPEQYSLARKATQEMLNVTDYIALTTDLWTSDSSKSYMTLTIHFIYDGKFKT--LTLSTREIKDTHTSENLAREMKDICETEWNILDKIICVTTDNAANIKKAVIDILQKRHHSCAAHTLNLVVQ 297
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E) HSP 1 Score: 85.1 bits (209), Expect = 6.020e-16 Identity = 59/172 (34.30%), Postives = 87/172 (50.58%), Query Frame = 1
Query: 46 AVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTR-VAEISSDAEQVIKAELRGTRP-GLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLA-EMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELALK 552
A+ V +D QP VV + + T L+ +P +++ + + E A + + L+ LTTD WT++ +YM +T HFI E F +TLS E +HTSE LA EM + I I +TTD AANIKKA +L++ H CAAHT+ L ++
Sbjct: 125 ALMRMVCVDFQPLQVVENTGFQEY---TRALNPNYELPSRKILSEKMIPEQYCMARRATQEMLKAIDYISLTTDLWTSDSSKSYMTLTIHFIHENKFKT--LTLSTREVKDAHTSENLAREMKDILETEWNILDKIICVTTDNAANIKKAVIDILQKRHHSCAAHTLNLVVQ 291
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1912F6 (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1912F6) HSP 1 Score: 82.8 bits (203), Expect = 3.800e-15 Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 1
Query: 1 QCHRKGDGSKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTRV--AEISSDAEQVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELAL 549
+ + + +++L + +++I D QP VV++P F L+ LD +P V + A S + K + LTTD WTA +G Y+ +T +I + F + +TL+ HTS+ + E L + + + T+TTD AAN+KKA + + EW GC AHT++L +
Sbjct: 101 RAQKHSENRQKELRQFLTDWIIEDFQPL-YVVQSPSFRKLI--CELDPSFIIPDEKGVKKIIYNAYNSMLPTLIEKINVEAKNVSLTTDMWTAKNGQGYIGITCSYI-DSKFNLYEVTLTVNYVRYPHTSQHIMESLEETLDEWKLREKTFTITTDNAANMKKAISDMDGIEWQGCTAHTLQLVI 281
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1AB16C (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1AB16C) HSP 1 Score: 81.6 bits (200), Expect = 9.060e-15 Identity = 59/182 (32.42%), Postives = 92/182 (50.55%), Query Frame = 1
Query: 19 DGSKEKLLNAVA---EFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVP---GLHVVTTRVAEISSDAE-QVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIEL 543
DGS +N + E + D QP VV++P F L+ + LD +P G+ V + + + A + IK + + +TTD WTA +G Y+ VT +I + F +N ITL+ HT++ +AE L + + T+TTD AAN+KKA + W GC+AHT++L
Sbjct: 82 DGSTGNAINHLLNEHEILKEDLQPL-YVVQSPSFWRLI--SKLDPAFIMPDEKGIKKVIYKAYKFTMPALIEKIKDDAKSV--SITTDMWTARNGQGYIGVTCSYI-DTKFNLNEITLTVNYVRYPHTAQHVAESLEEVFNEWNLRDKVFTITTDNAANMKKAIASMSNIRWQGCSAHTLQL 257
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C17C339 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C17C339) HSP 1 Score: 77.0 bits (188), Expect = 1.400e-14 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 184 VAEISSDAEQVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIEL 543
+ +I DA+ V +TTD WTA +G Y+ VT +I + F +N ITL+ HT++ +AE L + + T+TTD AAN+KKA + W GC+AHT++L
Sbjct: 5 IKKIKDDAKSV----------SITTDMWTARNGQEYIGVTCSYI-DTKFNLNEITLTVNYVRYLHTAQHVAESLKEVFNEWNLRDKVFTITTDNAANMKKAIASMSNIRWQGCSAHTLQL 113
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI00035A25D1 (zinc finger BED domain-containing protein 1-like n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A25D1) HSP 1 Score: 78.6 bits (192), Expect = 2.350e-14 Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 1
Query: 28 KEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVT-TRVAEISSDAEQVIKAELRGTR-PGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWH-GCAAHTIELALK 552
K L N VA+FV+LD QPF+VV + + H L A +D R S+P +T T + + + ++ EL LTTD+WT+ YMAVTAHF+ + + + S T++++AE L M + I + TD AAN+ A +L +H C AHT+ + ++
Sbjct: 52 KHALDNLVAQFVVLDMQPFTVVEDRGF--HTLMNA-MDPRYSLPSRRELTRTLIPNLYREEYANLQKELNDAEFITLTTDDWTSWSTKGYMAVTAHFV-DSQMQLKSKIIEIRRITSSQTADRIAEELRGIMSAWDITTKVFAIVTDNAANMIAAIKKL--PVYHVPCFAHTLNIVVQ 223
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: A0A8C5PB87_9ANUR (Uncharacterized protein n=6 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PB87_9ANUR) HSP 1 Score: 79.3 bits (194), Expect = 6.070e-14 Identity = 44/182 (24.18%), Postives = 90/182 (49.45%), Query Frame = 1
Query: 25 SKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTRVAEISSDAEQ----VIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSC---EECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELAL 549
+K+K AV +F++ D +PF + + L + R P ++ ++ +++++ Q +++E+ RP +T D+W A++ + Y+ +T H+I E + + LS E HT+ K +E+++ ++G I T N ++L+ +WHGCAAH ++L +
Sbjct: 106 TKKKYDAAVLKFIVADGRPFESAAGSGFKN--LCSVLTSGRYQPPHPPTLSRKLDDMANNLHQKLVQFLRSEINDCRPSITFDHWKADNKSNYLVLTIHYISESSWVMQSRCLSVVNLENLEADHTARKTSEIISNEFAKHGFGEEKILFATTDTTNTMPCTAKILDIQWHGCAAHILQLTI 285
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1C92E1 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1C92E1) HSP 1 Score: 76.3 bits (186), Expect = 5.550e-13 Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 220 KAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELAL 549
K + LTTD WTA +G Y+ +T +I + F + +TL+ HTS+ + E L + + + T+TTD AAN+KKA + + EW GC AHT++L +
Sbjct: 8 KINVEAKNVSLTTDMWTAKNGQGYIGITCSYI-DSKFNLYEVTLTVNYVRYPHTSQHIMESLEETLDEWKLREKTFTITTDNAANMKKAISDMDGIEWQGCTAHTLQLVI 116
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C197A25 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C197A25) HSP 1 Score: 74.3 bits (181), Expect = 2.920e-12 Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 1
Query: 250 LTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIEL 543
+TTD WTA +G Y+ VT +I + F +N ITL+ HT++ +AE L + + T+TTD AAN+KKA + W C+AHT++L
Sbjct: 35 ITTDMWTARNGQGYIGVTCSYI-DTKFNLNEITLTVNYVRYPHTAQHVAESLDEVFNEWNLRDKVFTITTDNAANMKKAIASMSNIRWQECSAHTLQL 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55184.12926.1 >prot_H-elongata_contig55184.12926.1 ID=prot_H-elongata_contig55184.12926.1|Name=mRNA_H-elongata_contig55184.12926.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp QCHRKGDGSKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVback to top mRNA from alignment at H-elongata_contig55184:2260..3225- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55184.12926.1 ID=mRNA_H-elongata_contig55184.12926.1|Name=mRNA_H-elongata_contig55184.12926.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=966bp|location=Sequence derived from alignment at H-elongata_contig55184:2260..3225- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55184:2260..3225- >mRNA_H-elongata_contig55184.12926.1 ID=mRNA_H-elongata_contig55184.12926.1|Name=mRNA_H-elongata_contig55184.12926.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig55184:2260..3225- (Himanthalia elongata Himel1 dioecious)back to top |