mRNA_H-elongata_contig55146.12921.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 177 bits (450), Expect = 3.690e-49 Identity = 87/129 (67.44%), Postives = 104/129 (80.62%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYINI 387
YAASTIL W R++R G FKRD RG+HERDWI+SE DL+ ++I W++TQK +TVKD ++YIN LF E GDL+RLLS YQ+ L VSM+TTHSWM ALG KYERATKSFYTDGHEK DVV YR YI++
Sbjct: 206 YAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFAYEIGDLSRLLS-YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDV 333
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5JMT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT5_9PHAE) HSP 1 Score: 175 bits (443), Expect = 1.140e-48 Identity = 85/129 (65.89%), Postives = 104/129 (80.62%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYINI 387
YAASTIL W R++R G KRD RG+HERDWI+SE DL+ +++ W++TQK +TVKD ++YIN LF +E GDL+RLLS YQ+ L VSM+TTHSWM ALG KYERATKSFYTDGHEK DVV YR YI++
Sbjct: 268 YAASTILGWLRDFRGHGGSKRDSRGVHERDWIMSEEDLKDELVMWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLS-YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDV 395
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.460e-48 Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYINI 387
YAASTIL W R++R G FK D RG+HERDWI+SE DL+ ++I W++ QK +TVKD ++YIN LF +E GDL+RLLS YQ+ L VSM+TTHSWM ALG KYERATKSFYTDGHEK DVV YR YI++
Sbjct: 128 YAASTILGWLRDFRGHGGFKLDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLS-YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDV 255
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 175 bits (443), Expect = 3.070e-48 Identity = 85/129 (65.89%), Postives = 104/129 (80.62%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYINI 387
YAASTIL W R++R G FKRD RG+HERDWI+SE D + ++I W++TQK +TVKD ++YIN LF ++ GDL+RLLS YQ+ L VSM+TTHSWM ALG KYERATKSFYTDGHEK DVV YR YI++
Sbjct: 383 YAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDPKDELIKWMRTQKRLTVKDVQNYINQWLFANQIGDLSRLLS-YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDV 510
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.900e-47 Identity = 85/123 (69.11%), Postives = 100/123 (81.30%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYR 369
YAASTIL W R++R G FKRD RG+HERDWI+SE DL+ +I W++TQK +TVKD ++YIN LF +E GDL+RLLS YQ+ L VSM+TTHSWM ALG KYERATKSFYTDGHEK DVV YR
Sbjct: 317 YAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDQLIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLS-YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYR 438
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5JI16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI16_9PHAE) HSP 1 Score: 169 bits (428), Expect = 5.580e-47 Identity = 82/129 (63.57%), Postives = 103/129 (79.84%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYINI 387
YAAST+L W R++R G FKRD R +HERDWI+S+ DL+ ++I W++TQK +TVKD ++YIN LF +E GDL+RLLS +Q+ L VSM TTHSW+ ALG KYERATKSFYTDGHEK DVV YR YI++
Sbjct: 226 YAASTVLGWLRDFRGHGGFKRDSRRVHERDWIMSKEDLKDELIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLS-HQVNLPVSMVTTHSWIIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDV 353
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5KP29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP29_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.370e-43 Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1
Query: 34 EYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYINI 387
++R G FKRD RG+H RDWI+SE DL+ ++I W++TQK +TVKD ++YIN LF SE GDL+ LLS YQ+ L VSMSTTHSWM ALG KYE+ATKSFYTDGHE+ VV YR YI++
Sbjct: 51 DFRGHGGFKRDSRGVHRRDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFASEIGDLSTLLS-YQVNLPVSMSTTHSWMIALGCKYEQATKSFYTDGHEEKVVVVYRGKYIDV 167
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 152 bits (383), Expect = 3.820e-40 Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYI 381
YA STIL+W R++R G F+RD RG HE DWI+SE DL+ ++ W+ +Q T+KD YING L + + DL+RL + YQ+ L VSMSTTHSWM LG +YERATKSFYTD HEK +VVEYR +YI
Sbjct: 314 YAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYINGPLLQDDKEDLSRLHA-YQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYI 439
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 142 bits (359), Expect = 4.870e-37 Identity = 68/127 (53.54%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYI 381
YA STIL+W R++R G F+RD RG HE DWI+SE DL+ ++ W+ +Q T+K+ YING L + + + L YQ+ L VSMST HSWM LG +YER TKSFYTD HEK +VVEYR +YI
Sbjct: 267 YAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKEVCKYINGPLLQDDKEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYI 393
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 140 bits (352), Expect = 5.390e-36 Identity = 71/129 (55.04%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 1 YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKCVTVKDTRDYINGTLFKSETGDLARLLSTYQLTLSVSMSTTHSWMKALGYKYERATKSFYTDGHEKPDVVEYRRDYINI 387
YAASTIL W R++R G FKRD RG+HERDWI+SE DL+ ++I W++TQK +T KD + L VSM+TTHSWM ALG KYERATKSFYTDGHEK DVV YR YI++
Sbjct: 397 YAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTAKD-------------------------VNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDV 500 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55146.12921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig55146.12921.1 >prot_H-elongata_contig55146.12921.1 ID=prot_H-elongata_contig55146.12921.1|Name=mRNA_H-elongata_contig55146.12921.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp YAASTILKWAREYRALGDFKRDLRGLHERDWILSEADLQQDIIGWLKTQKback to top mRNA from alignment at H-elongata_contig55146:3184..3570- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig55146.12921.1 ID=mRNA_H-elongata_contig55146.12921.1|Name=mRNA_H-elongata_contig55146.12921.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=387bp|location=Sequence derived from alignment at H-elongata_contig55146:3184..3570- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig55146:3184..3570- >mRNA_H-elongata_contig55146.12921.1 ID=mRNA_H-elongata_contig55146.12921.1|Name=mRNA_H-elongata_contig55146.12921.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=774bp|location=Sequence derived from alignment at H-elongata_contig55146:3184..3570- (Himanthalia elongata Himel1 dioecious)back to top |