prot_H-elongata_contig55085.12910.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55085.12910.1
Unique Nameprot_H-elongata_contig55085.12910.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length263
Homology
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BLAST of mRNA_H-elongata_contig55085.12910.1 vs. uniprot
Match: A0A6H5K212_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K212_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.650e-57
Identity = 121/155 (78.06%), Postives = 127/155 (81.94%), Query Frame = 0 
Query:    1 ADEDVLEEWKAMDATGNAKPGAVYANEEDRSRPHLSLLTFRGQMAVRGLFEFLLEACGSSATGGAGSGMVTRGSARSGVGG--ARAGDVPLLLSRQPFLNASLKALKVRQKGTMHRSRANTGAKEATDVQVLELVGHVLPSAIADLAHSMASACT 153
            ADEDVLEEWKAMDATGNAKPGAVYANEEDRSRP LSLLTFRG MAV GLF+FLLEACG S TG  G G    G A SG GG     GDVPLLLSR+PFLNASLKALKVRQKG MHRSRA   A + + VQVLELVGHVLPSA+ADLA +MASACT
Sbjct:  827 ADEDVLEEWKAMDATGNAKPGAVYANEEDRSRPQLSLLTFRGHMAVHGLFDFLLEACGHS-TGVVGGG----GLAASGRGGRMGSGGDVPLLLSREPFLNASLKALKVRQKGPMHRSRATVSAGQDSAVQVLELVGHVLPSALADLALAMASACT 976
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BLAST of mRNA_H-elongata_contig55085.12910.1 vs. uniprot
Match: D7FXK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK2_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 9.050e-45
Identity = 95/130 (73.08%), Postives = 102/130 (78.46%), Query Frame = 0 
Query:    1 ADEDVLEEWKAMDATGNAKPGAVYANEEDRSRPHLSLLTFRGQMAVRGLFEFLLEACGSSATGGAGSGMVTRG-SARSGVGGARAGDVPLLLSRQPFLNASLKALKVRQKGTMHRSRANTGAKEATDVQV 129
            ADEDVLEEWKAMDATGNAKPGAVYANEEDRSRP LSLLTFRG MAV GLF+FLLEACG S     G G+   G   R G+GG    DVPLLLSR+PFLNASLKALKV+QKG MHRSRA   A + + VQV
Sbjct:  522 ADEDVLEEWKAMDATGNAKPGAVYANEEDRSRPQLSLLTFRGHMAVHGLFDFLLEACGHSTGVVGGGGLAASGRGGRMGLGG----DVPLLLSREPFLNASLKALKVQQKGPMHRSRATVSAGQDSAVQV 647
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55085.12910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K212_9PHAE1.650e-5778.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXK2_ECTSI9.050e-4573.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 33..152
NoneNo IPR availablePANTHERPTHR12972:SF0PROTEIN DOWNSTREAM NEIGHBOR OF SONcoord: 33..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55085contigH-elongata_contig55085:719..2838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55085.12910.1mRNA_H-elongata_contig55085.12910.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55085 719..2838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55085.12910.1 ID=prot_H-elongata_contig55085.12910.1|Name=mRNA_H-elongata_contig55085.12910.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=263bp
ADEDVLEEWKAMDATGNAKPGAVYANEEDRSRPHLSLLTFRGQMAVRGLF
EFLLEACGSSATGGAGSGMVTRGSARSGVGGARAGDVPLLLSRQPFLNAS
LKALKVRQKGTMHRSRANTGAKEATDVQVLELVGHVLPSAIADLAHSMAS
ACTSSPTDSAGSGPDSARAASQLGGVNNSGDQGREGEEKIEERGETPALA
TEAPTQGPVCSTGQGSRVPQVEIAGGIAGDTTKKEEWLFRAIGTVDGETK
YLNAGFHAVEAGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024861Donson