prot_H-elongata_contig55075.12909.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55075.12909.1
Unique Nameprot_H-elongata_contig55075.12909.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length165
Homology
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 2.180e-66
Identity = 108/165 (65.45%), Postives = 126/165 (76.36%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSDGRPSDNSFYDNTISNTETGVKI 165
            MHDNHQYGFDPHDDSDYL IA N+VYNNVNHGIIASKRCN++KIY NEVY+GGA+AAGIFLHRS D  EVY N + +M DAG+A++E+   DIHDN     ++GIR+ LG  NN V+DNVF      G++TY GSD P     GRP DN FY+NTI  TETGVKI
Sbjct:  225 MHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKI 388          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 5.480e-66
Identity = 109/157 (69.43%), Postives = 132/157 (84.08%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDA-SSDGRPSDNSFYDNTI 156
            M DN QYGFDPHDDSD LTI+NN VY N NHGIIASKRCN++KI+ NEVY+GG +A GIFLHRSSD  EV+DNVVY+MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N++ +N+F   ++YGLYTY GSD PD  +S+GRPSDN F  NTI
Sbjct:  413 MRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTI 569          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 6.640e-65
Identity = 112/165 (67.88%), Postives = 130/165 (78.79%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSDGRPSDNSFYDNTISNTETGVKI 165
            MHDN QYGFDPHDDSDYLTIA NEVYNNVNHGIIASKRCN++KI++NEV +GGA AAGIFLHRSSD   V+DN + +MQDAG+A++ESFDA I+ N     KYGIR+SLG GNN VY N F + S+YGLYTY+GSD PD S DGRPS N    N + +   GVKI
Sbjct:  665 MHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKI 828          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 1.500e-63
Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSD--GRPSDNSFYDNTISNTETGVKI 165
            MHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCN++KI+ N VY+GG  A GIFLHRSSD CEV++N VYDM+DAGMAIMES  A I+DNTFTNVKYGIR+S+G   N+V +N F EC +YG+YTYQG+D P+AS D  G   DN+F+ NT+   E GVKI
Sbjct:  681 MHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTV---EGGVKI 844          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.630e-63
Identity = 112/167 (67.07%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSD--GRPSDNSFYDNTISNTETGVKI 165
            MHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCN++KI+ N VY+GG  A GIFLHRSSD CEV+ N VYDM+DAGMAIMES  A IHDNTFTNVKYGIR+S+G   N+V +N F EC +YG+YTYQG+D P+AS D  G   DN+F+ NT+   E GVKI
Sbjct:  620 MHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKI 783          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 3.960e-60
Identity = 106/166 (63.86%), Postives = 127/166 (76.51%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTP-DASSDGRPSDNSFYDNTISNTETGVKI 165
            MHDNHQYGFDPHDDSDYLT             IIASKRCN+++IY NEVY+GG  AAGIFLHRSSD   V+DNVV+DMQDAGMA++ES +ADI++N F++VK+GIR+SLG   N V++N+F++ S  GLYTYQGSD P D  SDGRPSDN F +N I N   GVKI
Sbjct:  302 MHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKI 455          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 3.790e-58
Identity = 97/165 (58.79%), Postives = 125/165 (75.76%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSDGRPSDNSFYDNTISNTETGVKI 165
            MHDNHQY            +ANN+VYNN NHGIIASKRCN++KIY N+V +GG +A GIFLHRSSD+ EVY N +++M DAG+A++ESF+ADIHDN    V++GIR+SLG G N VYDN F++CS +GLYTY GSD PD S+ GRP+ N+F +N ++N+  GVK 
Sbjct:  247 MHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKF 398          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.140e-54
Identity = 91/156 (58.33%), Postives = 112/156 (71.79%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSDGRPSDNSFYDNTI 156
            MHDN  YGFDPHDDSD+LT+ +NEVY+N  HGIIASKRCN + I  NEVY G +++AGIFL+RSSD   V  N V+D  DAG+A+MESF+AD+ DN F N KYG+RIS+G G N+   NV    +KY  Y+Y G+D PD    GR  DN F +NTI
Sbjct:   42 MHDNKGYGFDPHDDSDFLTVHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTI 197          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 2.550e-54
Identity = 95/165 (57.58%), Postives = 116/165 (70.30%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSDGRPSDNSFYDNTISNTETGVKI 165
            MHDN  YGFDPHDDSD+LTI +NEVYNN  HGIIASKRCN + I  NEVY G   +AGIFLHRSSD   V  N V+D  DAG+A++ESF+AD+ +NTF N KYG+R+S+G  +N+  +N+    SKY  YTY GSD PD  S GR  +N F  N+ S  E  +KI
Sbjct:  282 MHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKI 446          
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 1.480e-51
Identity = 91/165 (55.15%), Postives = 114/165 (69.09%), Query Frame = 0
Query:    1 MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVYNGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSDGRPSDNSFYDNTISNTETGVKI 165
            MHDN  YGFDPHDDSD+LTI +NEVYNN  HGIIASKRCN + I  NEVY G   +AGIFLHRSSD   V  N V+D  DAG+A++ESF+AD+ +NTF N KYG+R S+G  +N+  +N     ++Y  Y+Y G+D PD  S GR  +N F  N+ S  E  +KI
Sbjct:  278 MHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKI 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55075.12909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR8_ECTSI2.180e-6665.45Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI5.480e-6669.43Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LC73_ECTSI6.640e-6567.88Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LDB5_ECTSI1.500e-6366.47Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE1.630e-6367.07MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LRM4_ECTSI3.960e-6063.86Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE3.790e-5858.79MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q7XAK0_9PHAE1.140e-5458.33Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI2.550e-5457.58Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI1.480e-5155.15Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 88..109
e-value: 17.0
score: 14.3
coord: 39..63
e-value: 120.0
score: 11.5
coord: 111..133
e-value: 330.0
score: 10.0
coord: 15..37
e-value: 5.9
score: 15.9
coord: 146..165
e-value: 9600.0
score: 0.2
coord: 65..87
e-value: 1200.0
score: 6.6
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 13..160
e-value: 7.0E-14
score: 51.7
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..165
e-value: 6.9E-39
score: 135.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 2..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55075contigH-elongata_contig55075:130..1054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55075.12909.1mRNA_H-elongata_contig55075.12909.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55075 130..1054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55075.12909.1 ID=prot_H-elongata_contig55075.12909.1|Name=mRNA_H-elongata_contig55075.12909.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
MHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNDLKIYKNEVY
NGGANAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHDNTFTN
VKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASSDGRPSDNS
FYDNTISNTETGVKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR007742NosD_dom
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence