prot_H-elongata_contig5500.12905.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5500.12905.1
Unique Nameprot_H-elongata_contig5500.12905.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5KGF6_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF6_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.260e-30
Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDVKVFGINADQ----WRLAA 131
            +A V+ET+LYG  +WS  A H   L   H  FLTRCIGW K  R+D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE +W+  L  D+  F +  ++    W+ +A
Sbjct:   17 QAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKHMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESA 152          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5J747_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J747_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 6.190e-29
Identity = 54/107 (50.47%), Postives = 69/107 (64.49%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQE 106
            +A V+ET+LYG  +WSP A H   L   H  FLTRCIGW K  R+D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE
Sbjct:   17 QAEVVETLLYGCASWSPTAEHYTKLNETHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQE 123          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5KYA5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA5_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.410e-28
Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWM 110
            +A V+ET+LYG  +WS  A H   L   H  FLTRCIGW K  R+D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++FG + GG G  G QE +W+
Sbjct:  117 QAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLFGAMAGGVGYRGGQESDWV 227          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5LDM1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDM1_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.530e-28
Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDVKVFGINADQ----WRLAA 131
            +A V+ET+LYG  +WS  A H   L   H  FLTRCIGW K  R+D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE +W+  L  D+  F +  ++    W+ +A
Sbjct:  320 QAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRMCFAGFVLRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESA 455          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5JTX2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX2_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.040e-27
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 0
Query:    4 VLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTGSEN-IEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDVKVFGINADQ----WRLAA 131
            V+ET+LYG  +WS  A H   L   H  FLTRCI W K  R+D P+SY + L++ G E  IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE +W+  L  D+  F +  ++    W+ +A
Sbjct:  256 VVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIDWSKRKRSDRPLSYAEALIQAGCEQTIEATVRKRRLCFAGFVMRMEDSRLPKRILIGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESA 388          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5K5W0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 2.130e-27
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDV 117
            +A V+E +LYG  +WS  A H   L   H  FLTRCIGW K  R+D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE +W+  L  D+
Sbjct:  102 QAEVVEHLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDL 219          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.690e-27
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDVKVFGINADQ----WRLAA 131
            +A V++T+LYG  +WSP A H   L   H  FLTRC GW K   +D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE +W+  L  D+  F ++ ++    W+ +A
Sbjct:  635 QAEVVDTLLYGCASWSPTAEHYTKLNGTHRQFLTRCTGWSKRKCSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMSDEKEGGKWKESA 770          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5KZ39_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ39_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.870e-27
Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDV 117
            +A V+ET+LYG  +WS  A H   L   H  FLTRCIGW K  R+D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE++W+  L  D+
Sbjct:  222 QAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQERDWVSRLGEDL 339          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5L618_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L618_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.670e-27
Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTG-SENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDVKVFGINADQ----WRLAA 131
            +A V+ET+LYG  +WS    H   L   H  FLTRCIGW K  R+D P+SY   L++ G  E IEA +R+ R+ FAGFV RM D+RLP  ++ G + GG G  G QE +W+  L  D+  F +  ++    W+ +A
Sbjct:  540 QAEVVETLLYGCASWSLSVEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCKETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVPRLGEDLVAFNMRDEKEGGKWKESA 675          
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Match: A0A6H5KMR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR2_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 6.640e-27
Identity = 58/136 (42.65%), Postives = 81/136 (59.56%), Query Frame = 0
Query:    1 KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPISYLDTLMKTGSENI-EAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAGRVGEQEKEWMGCLLGDVKVFGINADQ----WRLAA 131
            +A V++T+LYG  +WS  A H   L   H  FLTRCIGW K NR+D P+SY    ++ G E I EAI+R+ R+ FAGFV RM   RLP  ++ G + GG G  G QE +W+  L  D+  F +  ++    W+ +A
Sbjct:  280 QAEVVKTLLYGCTSWSLTAEHYTKLNGTHRQFLTRCIGWSKRNRSDRPLSYAQAPIQAGCEEIIEAIVRKRRLCFAGFVVRMEYNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESA 415          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5500.12905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGF6_9PHAE4.260e-3043.38Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J747_9PHAE6.190e-2950.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYA5_9PHAE1.410e-2849.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5LDM1_9PHAE2.530e-2843.38Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JTX2_9PHAE2.040e-2742.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K5W0_9PHAE2.130e-2746.61Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGX2_9PHAE2.690e-2741.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ39_9PHAE2.870e-2747.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L618_9PHAE3.670e-2742.65MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KMR2_9PHAE6.640e-2742.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5500contigH-elongata_contig5500:5295..5690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5500.12905.1mRNA_H-elongata_contig5500.12905.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5500 5295..5690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5500.12905.1 ID=prot_H-elongata_contig5500.12905.1|Name=mRNA_H-elongata_contig5500.12905.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
KAVVLETILYGRVTWSPRASHDCTLRRAHHSFLTRCIGWRKNNRTDHPIS
YLDTLMKTGSENIEAIMRRMRIMFAGFVARMNDTRLPTCVVFGEIIGGAG
RVGEQEKEWMGCLLGDVKVFGINADQWRLAA*
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