prot_H-elongata_contig54987.12900.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig54987.12900.1
Unique Name	prot_H-elongata_contig54987.12900.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	149

Homology

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: D8LFY4_ECTSI (Elongation factor G, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFY4_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 5.420e-82
Identity = 133/149 (89.26%), Postives = 142/149 (95.30%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEPS++VLKKCLRKGTLE  FVPVLTGTAFKNKGVQPLLDAVVD+MPSP+EVE IKGVS+DGETAM+RPS DD PF+ALAFKIMSDPFVGTLTFTRIYSGVL SGT+VFNSVKGK ERVGRMLEMHANNREEIK+ARAGDIVALCGLK
Sbjct:  306 GEEPSVDVLKKCLRKGTLENVFVPVLTGTAFKNKGVQPLLDAVVDFMPSPIEVEAIKGVSVDGETAMNRPSSDDEPFAALAFKIMSDPFVGTLTFTRIYSGVLMSGTNVFNSVKGKTERVGRMLEMHANNREEIKEARAGDIVALCGLK 454

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A7S3AZE6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZE6_9EUKA)

HSP 1 Score: 227 bits (579), Expect = 1.820e-73
Identity = 113/149 (75.84%), Postives = 130/149 (87.25%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEPS+E LK+C+R GTL   F PVLTGTAFKNKGVQPLLDAVVDYMPSP++VE IKG S+DGET M+R S D+APFSALAFKIM+DPFVGTLTF RIYSG+LE GTSV NSVKGK+ER+GRMLEM+AN+R +I+ A AGDI+AL G K
Sbjct:   47 GEEPSVEDLKRCIRTGTLNGAFTPVLTGTAFKNKGVQPLLDAVVDYMPSPLDVEAIKGTSVDGETQMTRESSDEAPFSALAFKIMTDPFVGTLTFARIYSGILEKGTSVLNSVKGKRERIGRMLEMNANDRTDIEVAVAGDIIALVGCK 195

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A7S4DBA4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBA4_HETAK)

HSP 1 Score: 235 bits (600), Expect = 1.880e-71
Identity = 116/149 (77.85%), Postives = 133/149 (89.26%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEP++E LKKC+RKGT+E  FVPV+ GTAFKNKGVQPLLDA+VDYMPSP++V  IKG SLDGE  + R S D+ PFSALAFKIM+DPFVGTLTFTRIYSG+LESGT+VFNSVKGK ER+GRML MHAN+RE+IK+ARAGDIVAL GLK
Sbjct:  215 GEEPTVEQLKKCIRKGTIENLFVPVVLGTAFKNKGVQPLLDAMVDYMPSPLDVPAIKGTSLDGEQELVRKSSDEEPFSALAFKIMNDPFVGTLTFTRIYSGILESGTTVFNSVKGKNERIGRMLLMHANDREDIKEARAGDIVALAGLK 363

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A7S1TSD5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSD5_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.710e-70
Identity = 114/149 (76.51%), Postives = 130/149 (87.25%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEPS+E L+ C+RKGTLE  FVPVLTGTAFKNKGVQPLLDAV+ YMP+P +V NIKGVS DGE  M R S D+ PFSALAFKI +DPFVG LTFTRIYSGVL++G++V+NSVKGK ERVGRMLEMHAN+R EIK+ARAGDIVA+ GLK
Sbjct:  189 GEEPSVETLRACIRKGTLESAFVPVLTGTAFKNKGVQPLLDAVMYYMPAPTDVANIKGVSTDGEEEMERVSSDEEPFSALAFKIATDPFVGALTFTRIYSGVLKAGSNVYNSVKGKNERVGRMLEMHANDRTEIKEARAGDIVAIVGLK 337

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A7S3WR87_9SPIT (Hypothetical protein n=3 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3WR87_9SPIT)

HSP 1 Score: 228 bits (580), Expect = 1.680e-69
Identity = 113/149 (75.84%), Postives = 130/149 (87.25%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEPS   LKK +RKGTL+  FVPV+TGTAFKNKGVQPLLDA++DYMPSP++VE IKG S+DGET M+RPS DD PF+ALAFKIMSDPFVGTLTF RIYSGVLE G SV NSVKGK+ERVGRMLEM+AN+R +I+ ARAGDI+A+ G K
Sbjct:   79 GEEPSPIELKKLIRKGTLQGAFVPVITGTAFKNKGVQPLLDAIIDYMPSPIDVEAIKGTSVDGETPMTRPSSDDEPFAALAFKIMSDPFVGTLTFARIYSGVLEKGASVLNSVKGKRERVGRMLEMNANDRTDIEIARAGDIIAIVGCK 227

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A7S2PN72_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PN72_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.720e-69
Identity = 113/149 (75.84%), Postives = 128/149 (85.91%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEP +  LK C+RKGTL  K VPVLTGTAFKNKGVQPLLDAV+DYMPSPVEVE IKG+ +D ET   R S D  PFSALAFKIM+DPFVG+LTFTR+YSGVLE+G++V+NSVK K ERVGRML+MHANNREE+K A AGDI+ALCGLK
Sbjct:  114 GEEPDVATLKACIRKGTLANKIVPVLTGTAFKNKGVQPLLDAVIDYMPSPVEVEAIKGLEMDLETPTQRLSSDAEPFSALAFKIMNDPFVGSLTFTRVYSGVLEAGSTVYNSVKQKNERVGRMLQMHANNREEVKSAVAGDIIALCGLK 262

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A8G2F5U1_9PROT (Elongation factor G n=2 Tax=Thalassobaculum TaxID=526215 RepID=A0A8G2F5U1_9PROT)

HSP 1 Score: 226 bits (575), Expect = 1.430e-67
Identity = 108/149 (72.48%), Postives = 130/149 (87.25%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEPS EVL+ C+RKG L   FVPV  G+AFKNKGVQPLLDAVVDY+P+P +VE+IKGVS+DGET M R S DD PFSALAFKIM+DPFVG+LTF R+YSG+LE+G+SV N+VK K+ER+GRML MH+NNRE++K+ARAGDIVA+ GLK
Sbjct:  233 GEEPSEEVLRACIRKGVLTNSFVPVFLGSAFKNKGVQPLLDAVVDYLPTPTDVESIKGVSVDGETEMKRKSSDDEPFSALAFKIMNDPFVGSLTFVRVYSGILETGSSVMNTVKDKRERIGRMLLMHSNNREDVKEARAGDIVAIAGLK 381

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A7S4E6M3_9STRA (Elongation factor G, mitochondrial n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S4E6M3_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.530e-67
Identity = 112/149 (75.17%), Postives = 127/149 (85.23%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            GEEP  E LKKC+R GTL   FVPVLTGTAFKNKGVQPLLDAVVDYMP+P +VE IKG SLDGETAM R S D+ PFSALAFKIM+DPFVGTLTF RIYSG+L +G  V+NSVKG++ERVGRML+MHAN+R E+K A AGDI+A+ GLK
Sbjct:  284 GEEPDAETLKKCIRTGTLSGAFVPVLTGTAFKNKGVQPLLDAVVDYMPAPDDVEAIKGTSLDGETAMERISSDEEPFSALAFKIMTDPFVGTLTFCRIYSGILNAGDGVYNSVKGQRERVGRMLQMHANDRTEVKSAVAGDIIAVAGLK 432

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: W7THY0_9STRA (Elongation factor G, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THY0_9STRA)

HSP 1 Score: 226 bits (576), Expect = 4.070e-67
Identity = 116/149 (77.85%), Postives = 130/149 (87.25%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            G+EPS+EVLKKC+R+GTL+  FVPVLTG+AFKNKGVQPLLDAVVDYMPSP EVE+I+GV L GE   SR S DD PFSALAFKIM+DPFVG LTF RIYSGVLE+G+SV NS K KQERVGRMLEMHAN+R E+K ARAGDIVA+ GLK
Sbjct:  302 GKEPSVEVLKKCIRQGTLKQHFVPVLTGSAFKNKGVQPLLDAVVDYMPSPTEVEDIQGVLLTGEPT-SRASDDDVPFSALAFKIMNDPFVGPLTFARIYSGVLEAGSSVLNSPKNKQERVGRMLEMHANSRTELKSARAGDIVAIVGLK 449

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BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Match: A0A7S1B5E2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5E2_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.360e-67
Identity = 108/149 (72.48%), Postives = 126/149 (84.56%), Query Frame = 0

Query:    1 GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSPVEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYSGVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK 149
            G EP +  +KK +RKGTL L FVPVLTGTAFKNKGVQPLLDAV+DYMPSP+EV  IKG+  D E+   R S D+ PFSALAFKI +DPFVGT+TFTR+YSGVLESGT+VFNSVKGK ER+GRML+MHAN+R +IK A AGDI+A+CGLK
Sbjct:  264 GVEPDIPTIKKLIRKGTLALDFVPVLTGTAFKNKGVQPLLDAVIDYMPSPLEVAAIKGILPDDESETVRESSDEEPFSALAFKIATDPFVGTITFTRVYSGVLESGTTVFNSVKGKNERIGRMLQMHANDRTDIKTAVAGDIIAICGLK 412

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot

BLAST of mRNA_H-elongata_contig54987.12900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFY4_ECTSI	5.420e-82	89.26	Elongation factor G, mitochondrial n=2 Tax=Ectocar...	[more]
A0A7S3AZE6_9EUKA	1.820e-73	75.84	Hypothetical protein (Fragment) n=1 Tax=Haptolina ...	[more]
A0A7S4DBA4_HETAK	1.880e-71	77.85	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S1TSD5_9STRA	3.710e-70	76.51	Hypothetical protein (Fragment) n=2 Tax=Phaeomonas...	[more]
A0A7S3WR87_9SPIT	1.680e-69	75.84	Hypothetical protein n=3 Tax=Choreotrichia TaxID=1...	[more]
A0A7S2PN72_9STRA	1.720e-69	75.84	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A8G2F5U1_9PROT	1.430e-67	72.48	Elongation factor G n=2 Tax=Thalassobaculum TaxID=...	[more]
A0A7S4E6M3_9STRA	2.530e-67	75.17	Elongation factor G, mitochondrial n=2 Tax=Pelagom...	[more]
W7THY0_9STRA	4.070e-67	77.85	Elongation factor G, mitochondrial n=2 Tax=Monodop...	[more]
A0A7S1B5E2_9STRA	5.360e-67	72.48	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 91..148 e-value: 5.9E-12 score: 45.8
None	No IPR available	GENE3D	2.40.30.10		coord: 60..149 e-value: 8.7E-35 score: 120.9
None	No IPR available	GENE3D	3.40.50.300		coord: 1..59 e-value: 6.1E-16 score: 60.7
None	No IPR available	PANTHER	PTHR43261	FAMILY NOT NAMED	coord: 3..149
None	No IPR available	PANTHER	PTHR43261:SF1	RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL	coord: 3..149
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 32..149

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig54987	contig	H-elongata_contig54987:925..3151 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig54987.12900.1	mRNA_H-elongata_contig54987.12900.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig54987 925..3151 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig54987.12900.1 ID=prot_H-elongata_contig54987.12900.1|Name=mRNA_H-elongata_contig54987.12900.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
GEEPSLEVLKKCLRKGTLELKFVPVLTGTAFKNKGVQPLLDAVVDYMPSP
VEVENIKGVSLDGETAMSRPSKDDAPFSALAFKIMSDPFVGTLTFTRIYS
GVLESGTSVFNSVKGKQERVGRMLEMHANNREEIKQARAGDIVALCGLK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004161	EFTu-like_2
IPR009000	Transl_B-barrel_sf