mRNA_H-elongata_contig54975.12899.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: A0A6H5JF22_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF22_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.700e-25 Identity = 51/69 (73.91%), Postives = 61/69 (88.41%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLEKTRSLELMTGKKKMHR 207
+ENVP ELRSAVALEAYF+DLFPG +HSAVMCLNM LE KVE+RE++AD+LEKTRSL+L+TGK H+
Sbjct: 224 VENVPAELRSAVALEAYFEDLFPGCIHSAVMCLNMPNLEAKVERREVVADRLEKTRSLQLLTGKVVQHK 292
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: D8LGF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF9_ECTSI) HSP 1 Score: 103 bits (257), Expect = 3.520e-24 Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLEKTRSLELMTGKKKMHR 207
+ENVP ELRSAVALEAYF+DLFPG +HSAVMCLNM LE KVE+RE++AD LEKTRSL+L+TGK H+
Sbjct: 225 VENVPAELRSAVALEAYFEDLFPGCIHSAVMCLNMPNLEAKVERREVVADWLEKTRSLQLLTGKVVQHK 293
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: K0SUY1_THAOC (Uncharacterized protein (Fragment) n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUY1_THAOC) HSP 1 Score: 61.2 bits (147), Expect = 2.760e-9 Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLEKTRSLELMTGKKKMH 204
IE VPV LRS VAL +YFD LFPGQVHSA + +N+ L+ +R + +LEK+ S +TG++ H
Sbjct: 363 IEKVPVALRSNVALYSYFDQLFPGQVHSASIAMNVPDLDQMSARRLRVCRRLEKSVSFFRLTGQRPTH 430
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: A0A7R9UFD0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFD0_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.610e-8 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLEK 162
+E +P LR+ AL YF++LFPGQVHSA++CLN R L + +RE +A LEK
Sbjct: 219 VEMIPPHLRTNAALYKYFNELFPGQVHSAIVCLNTRKLAAIMRRREQVASLLEK 272
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: W7UA14_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA14_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 3.020e-7 Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLEKTRSLELMTGKKKM 201
++ +P+E R+ V L FD++FPG VHSAV+ L LED V++R + D LEK + ++ ++ M
Sbjct: 218 VDRIPLEYRNNVGLYTLFDEIFPGDVHSAVVALRADALEDLVQKRAALVDSLEKALATRSVSNREPM 284
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: A0A4D9D0H9_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0H9_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 3.030e-7 Identity = 26/67 (38.81%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLEKTRSLELMTGKKKM 201
++ +P+E R+ V L FD++FPG VHSAV+ L LED V++R + D LEK + ++ ++ M
Sbjct: 1065 VDRIPLEYRNNVGLYTLFDEIFPGDVHSAVVALRADALEDLVQKRAALVDSLEKALATRSVSNREPM 1131
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: A0A7S1XLF6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLF6_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 5.050e-6 Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLE 159
+E VP LR++ AL YFD++FPG+VHSAV+CL+ L + RE +A LE
Sbjct: 227 VEGVPRHLRTSSALYKYFDEIFPGKVHSAVVCLDTSKLARLMRARERVAALLE 279
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: B8C1D9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1D9_THAPS) HSP 1 Score: 52.0 bits (123), Expect = 5.050e-6 Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLEKTRSLELMTGKKKMH 204
+E VPV LRS AL YF+++FP QVHS + +N+ LE +R +A +LEK+ + TG + H
Sbjct: 440 VEKVPVALRSNTALFNYFNEMFPNQVHSVCLAMNVPDLEALSNRRLRVARRLEKSLAYYHATGSRPTH 507
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Match: A0A6H5KK43_9PHAE (ERD protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK43_9PHAE) HSP 1 Score: 49.7 bits (117), Expect = 3.270e-5 Identity = 22/53 (41.51%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 1 IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADKLE 159
+EN+P + RS+ AL YFD+LFPG+V A +C++ LE +E+++ +K+E
Sbjct: 191 VENIPEDKRSSPALYGYFDNLFPGKVSYASLCMHSSDLEATLEKKQEALEKIE 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54975.12899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig54975.12899.1 >prot_H-elongata_contig54975.12899.1 ID=prot_H-elongata_contig54975.12899.1|Name=mRNA_H-elongata_contig54975.12899.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp IENVPVELRSAVALEAYFDDLFPGQVHSAVMCLNMRGLEDKVEQREIIADback to top mRNA from alignment at H-elongata_contig54975:157..551+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig54975.12899.1 ID=mRNA_H-elongata_contig54975.12899.1|Name=mRNA_H-elongata_contig54975.12899.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=395bp|location=Sequence derived from alignment at H-elongata_contig54975:157..551+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig54975:157..551+ >mRNA_H-elongata_contig54975.12899.1 ID=mRNA_H-elongata_contig54975.12899.1|Name=mRNA_H-elongata_contig54975.12899.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=420bp|location=Sequence derived from alignment at H-elongata_contig54975:157..551+ (Himanthalia elongata Himel1 dioecious)back to top |