prot_H-elongata_contig54940.12892.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54940.12892.1
Unique Nameprot_H-elongata_contig54940.12892.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.970e-15
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    4 IVLEIADGYCDDENNNARCGWDGGDCCECTCISSGFTCGLTGYDCQDPDA 53
            I + + DG+CD ENNNA C WDGGDCCECTC+ S + CG+ G+ C DP A
Sbjct: 1973 IGVYVTDGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPSA 2022          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: A0A2E8RYL9_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E8RYL9_9DELT)

HSP 1 Score: 74.3 bits (181), Expect = 3.250e-14
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    8 IADGYCDDENNNARCGWDGGDCCECTCISSGFTCGLTGYDCQDPDA 53
            + DG+CD  NN+A C WDGGDCCE TC+S  + CG+ GYDC+DP+A
Sbjct:  692 VGDGWCDPGNNSASCDWDGGDCCETTCVSEEYPCGVEGYDCEDPEA 737          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.880e-13
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 CNGIVLEIADGYCDDENNNARCGWDGGDCCECTCISSGFTCGLTGYDCQDPDA 53
            C G ++ +ADG CD  NNN  CG+DGGDCC CTC+   + CG+ G+ C DP A
Sbjct:  177 CGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRGFACIDPSA 229          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 5.380e-13
Identity = 32/57 (56.14%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 CNGIVLEIADGYCDDENNNARCGWDGGDCCECTC---ISSGFTCGLT--GYDCQDPD 52
            C G +  I DGYCD++NN A CG+DGGDCC CTC         CGL   GYDC+DPD
Sbjct:  162 CGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDPD 218          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: D7FX76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX76_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 6.440e-13
Identity = 32/57 (56.14%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 CNGIVLEIADGYCDDENNNARCGWDGGDCCECTC---ISSGFTCGLTG--YDCQDPD 52
            C G +  I DGYCD++NN A CG+DGGDCC CTC         CGL G  YDC+DPD
Sbjct:  160 CGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGVDADVEHECGLLGDGYDCRDPD 216          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 7.370e-13
Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    3 GIVLEIADGYCDDENNNARCGWDGGDCCECTCISSGFTCGLTGYDCQDPDA 53
            G V  I DG+C DENNN  C +DGGDCCECTC+ + + CG   + C DP A
Sbjct:   69 GYVASIGDGFCSDENNNEVCDYDGGDCCECTCVDAFYPCGYVAFACIDPSA 119          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: A0A7S1TXY0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXY0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.890e-12
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 CNGIVLEI--ADGYCDDENNNARCGWDGGDCCECTCIS-SGFTCGLTGYDCQDP 51
            C G + E   ADGYCD E N   CGWDGGDCCE TC+S S FTCG+ GY+C +P
Sbjct:  487 CVGGLFETYTADGYCDPEMNTDACGWDGGDCCEQTCVSGSPFTCGVNGYNCVNP 540          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 3.510e-12
Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 CNGIVLEIADGYCDDENNNARCGWDGGDCCECTCISSGF-TCGLTGYDCQDPDA 53
            C G +  I DG CD  NNN  CGWDGGDCC CTC  S + +C     DCQDP+A
Sbjct:  223 CEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSYYYSCSSYSMDCQDPNA 276          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 8.970e-12
Identity = 33/59 (55.93%), Postives = 34/59 (57.63%), Query Frame = 0
Query:    1 CNGIVLEIADGYCDDENNNARCGWDGGDCCECTCISSG-----FTCGLTG--YDCQDPD 52
            C G    I DGYCD + NNA CGWDGGDCC CTC S         CG  G  YDC DPD
Sbjct:   67 CLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGYDCLDPD 125          
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Match: A0A8J2SY22_9STRA (Hypothetical protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SY22_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.230e-11
Identity = 32/53 (60.38%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 CNGIVLEIADGYCDDENNNARCGWDGGDCCECTCISS-GFTCGLTGYDCQDPD 52
            C G    I DG CD  NNNA C +DGGDCCE TC+SS  +TCG   YDC DPD
Sbjct:  926 CAGTPNWIGDGMCDSSNNNAACSYDGGDCCEATCVSSTSYTCG--NYDCVDPD 976          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54940.12892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG7_ECTSI1.970e-1560.00LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2E8RYL9_9DELT3.250e-1460.87Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A6H5JTT4_9PHAE2.880e-1352.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE5.380e-1356.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX76_ECTSI6.440e-1356.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE7.370e-1354.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TXY0_9STRA1.890e-1261.11Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A6H5J6K0_9PHAE3.510e-1255.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX77_ECTSI8.970e-1255.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2SY22_9STRA1.230e-1160.38Hypothetical protein n=5 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainPFAMPF00066Notchcoord: 8..29
e-value: 6.2E-5
score: 23.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54940contigH-elongata_contig54940:2879..3037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54940.12892.1mRNA_H-elongata_contig54940.12892.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54940 2879..3037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54940.12892.1 ID=prot_H-elongata_contig54940.12892.1|Name=mRNA_H-elongata_contig54940.12892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
CNGIVLEIADGYCDDENNNARCGWDGGDCCECTCISSGFTCGLTGYDCQD
PDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom