prot_H-elongata_contig54869.12882.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54869.12882.1
Unique Nameprot_H-elongata_contig54869.12882.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length225
Homology
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: D7FYA9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA9_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 2.420e-58
Identity = 95/131 (72.52%), Postives = 113/131 (86.26%), Query Frame = 0
Query:   29 MCPRLGDAYARSENVGEIRVDVVFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLPASVEMW 159
            MCPRLGDAYARSE V ++R DVVF RLRKVV   L TLDASGGRLGFLP+EI++ PEM CLT++NLSRN+LFNSDHVFG+L  +K+LKKLDLTDN+F+G+LS AAG L  LE+LRLD NQ+T LPA+V+MW
Sbjct:    1 MCPRLGDAYARSEAVLDVRADVVFSRLRKVVKYGLETLDASGGRLGFLPDEIRERPEMACLTNLNLSRNQLFNSDHVFGILLGLKNLKKLDLTDNFFNGVLSAAAGRLRELEELRLDVNQITELPAAVDMW 131          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: A0A7S3YCW6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCW6_HETAK)

HSP 1 Score: 153 bits (387), Expect = 7.250e-41
Identity = 77/158 (48.73%), Postives = 107/158 (67.72%), Query Frame = 0
Query:    1 GKKKGKKKSGPE-----RVVVTTRHIEEERLRCMCPRLGDAYARSENVGEIRVDVVFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLP 153
            GKKKGK K          V  TT +I  ER R MCPRLGD Y R +N  EI+ DVV  ++ K   N  +TLD SGG LGFLP+E++  PE++ +T++NL++N+LFNSDHVFGV+S ++ ++ L+L+DN+ +G LS + G    + +LRLD+NQL  LP
Sbjct:    3 GKKKGKGKKXXXXXELAEVPTTTPYIVAERERAMCPRLGDNYVRVQNSDEIKKDVVQWKIEKAAMNGASTLDISGGNLGFLPQELRTRPELQSITEINLAKNQLFNSDHVFGVVSALERIRVLNLSDNFLNGQLSDSVGLCISIRELRLDSNQLAALP 160          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: F0Y819_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y819_AURAN)

HSP 1 Score: 145 bits (367), Expect = 5.730e-38
Identity = 78/157 (49.68%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   10 GPERVVVTTRHIEEERLRCMCPRLGDAYARSENVGEIRVDVVFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLPASVEMWMELRALS 166
            GPE  VVTTR I  ER RCMCPRLGDA  RSE    IR++ VF ++R+ V     TLD S   LGF+PEE++  PE+R LT+++LSRN+LF SDHVF             L+DN+F+G LS     +  LEDL LD NQLT LP +V  W  ++  S
Sbjct:   18 GPE--VVTTRTIIRERERCMCPRLGDAAVRSERADAIRLECVFFKIRRAVVQGKETLDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDHVFSXXXXXXXXXXXXLSDNFFNGPLSERCTKMVALEDLALDGNQLTELPENVGDWKLMKRFS 172          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: A0A836C9T9_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.050e-33
Identity = 62/125 (49.60%), Postives = 91/125 (72.80%), Query Frame = 0
Query:   29 MCPRLGDAYARSENVGEIRVDVVFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLP 153
            MCPRLGD Y   +   E+R D +F RLR+ +H + +TL  + G LG LP+EI+  PE++ L +++LSRN+LFNS+ VFGVL  ++ L+KLDL+DN+F+G+LS AAG L  L+++ LD N ++ LP
Sbjct:    1 MCPRLGDVYKNEQAADEVRADRMFFRLRRAIHESTDTLSLANGNLGSLPDEIRTRPELQNLKELDLSRNQLFNSNQVFGVLQSLEQLQKLDLSDNFFNGVLSPAAGLLTQLQNISLDNNHISQLP 125          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: A0A7S1U9P1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9P1_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.690e-33
Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = 0
Query:    3 KKGKKKSGPERVVVTTRHIEEERLRCMCPRLGDAYARSENVGEIRVDVVFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLPAS-VEMWMELRALSMSH 169
            KKGK K+     ++TT  I + R  C+CPRLGD+    E   + R+DV++ R+ K      N L+ S   L FLPE+I   PE+  +  ++LS N+LFNSDHVF +L+ +  LKKL+L+ N   G LS AA  +  LE+LRLD+N+LT LP + +E W  L+  S+SH
Sbjct:    2 KKGKGKAAAP--ILTTPAIIKARQTCLCPRLGDSLRNMEIADDCRMDVIYWRMNKAAERGHNALNLSHAALDFLPEDIIHIPELVGVVSLDLSYNRLFNSDHVFEILTHLPLLKKLNLSHNRLHGALSVAACRIETLEELRLDSNELTKLPETGIENWRSLKVFSVSH 167          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: A0A8J2SS54_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SS54_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.310e-32
Identity = 75/159 (47.17%), Postives = 100/159 (62.89%), Query Frame = 0
Query:    3 KKGKK-KSGPER-VVVTTRHIEEERLRCMCPRLGDAYARSENVGEIRVDVVFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLPASVEMW 159
            KKGKK K G +   +VTTR +  ER RCMCPRLGDA  R E   EI+ + V  R++KV     + LD S   LGF+P+E+   P +  L  V+LSRN+LF+SDHVF  L  + SLK L+L  N+ +G L+  A ++  LE+L LD NQLT LP+ +  W
Sbjct:    3 KKGKKGKGGADADAIVTTRAMLVERERCMCPRLGDAIERRERANEIKRECVQARIKKVGEFKRDYLDMSASGLGFVPDEVPRSPSLTRLVRVDLSRNQLFSSDHVFQSLEHITSLKILNLAHNFLNGPLTGRATDVTSLEELYLDHNQLTALPSDIGNW 161          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: A0A7S2S4U1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4U1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.740e-10
Identity = 56/168 (33.33%), Postives = 80/168 (47.62%), Query Frame = 0
Query:   14 VVVTTRHIEEER--LRCMCPRLGDAYARSENVGEIRVDVVFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRC---------LTDVNLSRNKLFNSDHVFGVLSCMK-SLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLP-ASVEMWMELRALSMS 168
            V+VT+     ER  ++  C  LG  Y+      EIR +V   RLR V   +   LD  G  LG +PEE+     +           LT ++LS+N L  +DHVF  L+C+  +L KL+++ N   G L   A  L  LE+L    N +  L  A+   W  LR L +S
Sbjct:   38 VIVTSAQQARERSHIQRECIPLGRRYSVLCRAQEIRREVAESRLRAVYSRSAECLDLRGLDLGHVPEELAALSRLEADIEPAGWNGLTALDLSKNSLNTTDHVFQALACLGGTLLKLNVSANELSGPLPDTARALTHLEELDASRNHIARLTDAAAAGWSRLRKLDLS 205          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: F0YRJ7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRJ7_AURAN)

HSP 1 Score: 65.5 bits (158), Expect = 5.170e-9
Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = 0
Query:   66 LDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGLPASVEMWMELRALS 166
            LD S   LGF+PEE++  PE+R LT+++LSRN+LF SDH      C K +                       LEDL LD NQLT LP +V  W  ++  S
Sbjct:    1 LDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDH-----RCTKMV----------------------ALEDLALDGNQLTELPENVGDWKLMKRFS 74          
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Match: A0A6G1G9Q9_9PEZI (L domain-like protein n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1G9Q9_9PEZI)

HSP 1 Score: 53.9 bits (128), Expect = 6.690e-5
Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 0
Query:   63 LNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLFNSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLTGL 152
            +  LD  G  L  LP  ++    +  LT +NL+RN L   D+VF V+S +K L+ L L++    G L  + G LH L+ L L  N+LT L
Sbjct:  188 IEVLDLHGNLLRTLPMGLR---RLERLTSLNLTRNNL--DDNVFEVISQIKPLRDLKLSECSLSGTLPESIGQLHALKTLDLSGNKLTAL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54869.12882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FYA9_ECTSI2.420e-5872.52Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A7S3YCW6_HETAK7.250e-4148.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y819_AURAN5.730e-3849.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836C9T9_9STRA1.050e-3349.60Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A7S1U9P1_9STRA4.690e-3343.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2SS54_9STRA7.310e-3247.17Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2S4U1_9STRA1.740e-1033.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YRJ7_AURAN5.170e-939.60Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6G1G9Q9_9PEZI6.690e-537.78L domain-like protein n=1 Tax=Eremomyces bilateral... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 27..225
e-value: 7.1E-29
score: 102.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 114..172
e-value: 5.3E-7
score: 29.3
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 109..224
NoneNo IPR availablePANTHERPTHR16083:SF18coord: 109..224
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 59..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54869contigH-elongata_contig54869:137..2437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54869.12882.1mRNA_H-elongata_contig54869.12882.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54869 137..2437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54869.12882.1 ID=prot_H-elongata_contig54869.12882.1|Name=mRNA_H-elongata_contig54869.12882.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp
GKKKGKKKSGPERVVVTTRHIEEERLRCMCPRLGDAYARSENVGEIRVDV
VFHRLRKVVHNNLNTLDASGGRLGFLPEEIKDWPEMRCLTDVNLSRNKLF
NSDHVFGVLSCMKSLKKLDLTDNYFDGMLSTAAGNLHGLEDLRLDANQLT
GLPASVEMWMELRALSMSHNALSLLPPQVRNWRSLENINVRHNDLRILPS
EMELWTKLRRLLAGCNGILELPPQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt