mRNA_H-elongata_contig54794.12878.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig54794.12878.1
Unique Name	mRNA_H-elongata_contig54794.12878.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: D8LAV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV2_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 3.840e-86
Identity = 235/482 (48.76%), Postives = 268/482 (55.60%), Query Frame = 1

Query:   19 PPYLAAGVLPFCVLGGDLLFLLGQQLRFRSRGRGSSFSEIEGALTSSDGVVAATNTTDTASCPRTKLSPPAPPWTADGPLIDDPSGSSCRLPPSSVVEASLEGIEQRVS-PFTPLSS-SALPSGIVGDTTPGGPPGAVSTSTARGTPQ-TEDTALLEATAVAGSSTPVAAAAGARQAGTNGDIGNYITKAESSKRGSPPPLNGWVLHDRGNTGVTVA---------PRRTVPIPAVEPFDAATAAVT-------------TLTTASLKTEAYRQTPPVTRADSTVNEREKLEEKGITAGFCKQDIVPAGLLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEV-GNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVRLGDCRYLRLFHK 1386
            P YLAAGVLPFCVLGGDLLFLLGQQLRF SR RG SF E+ G  T+    VAA +    AS    +L    PP     PL   PSG+       + V     G   +VS   +P SS SA                           Q + +TA     A   +S PVA   GA + GT   +    T A  ++ G   P+ G      G     VA              P  A +P  A  AAV              +  TA L  E     PP    D        +EE     G   Q  VPAGLLWSDFGG REA DADAEETASREFAEESFG+F+GVRL+SDSVARSQATM++ALRDPSLRGKRVFECRNGGYVMF+AEVDFVPD+M+ LARKEIV  GE G+G D      E  G+G   AS+P   GFSEKTDFAWVPA+ LL AMRESRNRSTR+VVV+LG CRYLRLFHK
Sbjct:  139 PAYLAAGVLPFCVLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTT---PVAAEDEGRVASAAARQL----PPSIETTPL---PSGAPXXXXXXTPVWRPRRGPRAKVSLSLSPGSSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRETAAKVEEAAPSASFPVA---GASRDGTEHGM---QTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAATDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEE----DPPAATGDP----HPPVEETAAAPG---QGTVPAGLLWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIV--GEDGSGPDAVGVQGECWGSGQGQASSP---GFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHK 588

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A6H5JSG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 3.190e-77
Identity = 216/490 (44.08%), Postives = 251/490 (51.22%), Query Frame = 1

Query:    1 PVPAERPPYLAAGVLPFCVLGGDLLFLLGQQLRFRSRGRGSSFSEIEGALTSSDGVVAATNTTDTASCPRTKLSPPAPPWTADGPLIDDPSGSSCRLPPSSVVEASLEGIEQRVSPFTPLSSSALPSGIVGDTTPGGPPGAVSTSTARGTPQTEDTALLEATAVAGSSTP----------VAAAAGARQAGTNGDIG---------------NYITKAESSKRGS--PPPLNGWVLHDRGNTGVTVAPRRTVPIPAVEPFDAATAAVTTLTTASLKTEAYRQTPPVTRADSTVNEREKLEEKGITAGFCKQDIVPAGLLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKN-DSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVRLGDCRYLRLFHK 1386
            P P   P YLAAGVLPFCVLGGDLLFLLGQQLRFRSR RG SF  + G  T+S                +  LS    P T+                                                           VS  TA    + E+ A      +AG+ST             A AG       GD G               N +  A  S  G+  P  L+G  + +   +G +             P D ++       TA L  E     PP   A S  +    +EE     G   Q  VP GLLWSDFGG +EA DADAEETASREFAEESFG+F+GVRL+SDSVARSQATM++ALRDPSLRGKRVFECRNGGYVMF+AEVDFVPD+M+ LARKEIV  GE  +G D      +  G+G   AS+P   GFSEKTDFAWVPA+ LL AMRESRNRSTR+VVV+LG CRYLRLFHK
Sbjct:  134 PSPPAPPAYLAAGVLPFCVLGGDLLFLLGQQLRFRSRVRGRSFPAMGGGSTTS-AXXXXXXXXXXXXXXQLPLSMETTPLTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQVSRETAA---KVEEAAPASPFQLAGASTDGTEHVMQTGVCRARAGGGAPTGGGDFGIAGKRSEMAAVAVQENDLEAATDSPSGAGDPSALHGTAVKNGPRSGGS------------NPEDGSS------NTALLPEE----DPP---AASIGDPHPPVEETAAAPG---QGTVPVGLLWSDFGGAKEAGDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIV--GEDDSGSDAVGVQGEHGGSGQGQASSP---GFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHK 586

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A7S3XND0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XND0_HETAK)

HSP 1 Score: 102 bits (253), Expect = 8.280e-20
Identity = 89/272 (32.72%), Postives = 111/272 (40.81%), Query Frame = 1

Query:  853 DIVPAGLLWSDFGGGREADDADA-EETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIV-------------DGGEGGTGKDGKND--------SDEVGN--------------------------------GTDSASTPASE----------------------------------------GFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVRLGDCRYLRLFHK 1386
            D    GLLWSDFGG +E  D +  E TASREFAEE+FG+F G+      V +S   M   L D    GK VF+  NG YVMF+A V FV D+M+ LAR++               +G  G   +D K +        SD  GN                                GT      A+                                         G SEK DFAWVPA SL+  + E+ NRS R+V +RLG CR  R+FHK
Sbjct:   47 DTQMHGLLWSDFGGKKEPQDQEIPERTASREFAEETFGMFGGLGGSEKIVQKSAEEMLNTLLDKEKEGKEVFKIINGQYVMFLAPVTFVDDLMLNLAREQWQQEHGNAMQSHPHKEGSLGTQSEDSKRECADRKAARSDSSGNEPKQEDYYEPVCTSGKVPHQPAETSSVNKILSGTQPDLAKAAHDSSGVNQLLKCLADVVPQMSESKIPSLTHQEELLLQQQKGGDSEKLDFAWVPAQSLVKTLEENANRSRRKVSLRLGGCRVFRMFHK 318

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A8J9S0U8_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0U8_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 6.670e-14
Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 1

Query:  874 LWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTA 1305
            +W DFGG REA D+D ++TASREFAEE+ G+F    + S SVA SQ  MA  LRD     + V + + G Y MFIA + F+  +M  LA ++                         +A T A  G +EKT FAWV    LL A
Sbjct:   56 MWKDFGGSREAIDSDVQDTASREFAEETLGMFASQNVDSASVAASQVLMAAQLRDQRHSLEVVHKLKKGQYSMFIALLPFLDPLMFYLAMRQ-------------------------NAETQAVTG-AEKTAFAWVRLDQLLAA 173

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A7S3VJL3_DUNTE (Hypothetical protein n=2 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VJL3_DUNTE)

HSP 1 Score: 75.9 bits (185), Expect = 7.780e-11
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 1

Query:  871 LLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKE 1149
            ++WSDFGG REA DAD+ ETASREFAEE+ G+F GV +   +V RS   MA  LR        V + R G Y M+   V ++  I  +LA ++
Sbjct:   52 IMWSDFGGKREAADADSIETASREFAEETLGVFGGVSVDPAAVKRSADEMAARLRSGDRSLCSVHQLRKGAYHMYACMVTYIDPIFFELAMQQ 144

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A5J4XWS7_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XWS7_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 1.050e-10
Identity = 52/141 (36.88%), Postives = 69/141 (48.94%), Query Frame = 1

Query:  883 DFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTA 1305
            DFGG REA D D+E TASREFAEE+ GLF G  +   SVA     M T L       K V + + G Y M++A+   +  +M+ LA ++                         +A T A +G +EKT FAWV  + LL A
Sbjct:   19 DFGGQREAIDPDSETTASREFAEETMGLFGGCEVNGSSVAACSRQMRTQLIQRQHVLKVVHQLKKGEYHMYVAQTPHIDPLMLHLALQQ-------------------------NAETDAVDG-AEKTAFAWVALSDLLAA 133

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A061QTB2_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QTB2_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 5.400e-8
Identity = 52/152 (34.21%), Postives = 71/152 (46.71%), Query Frame = 1

Query:  874 LWSDFGGGREA-DDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNR 1326
            +W DFGG REA DD D+  TASREF+EE+ G+F+   +   SVA S   M+  LR       R  + + G Y  F+A   +V  + + LA +                          +  T   EG +EKT FAWVP   LL A+ E+  R
Sbjct:   62 MWGDFGGHREASDDGDSVYTASREFSEETLGMFSSALVDPSSVADSTREMSLILRSRDAMQVR-HKLKKGEYHFFVARTAYVEPLYLHLAAQL-------------------------NRETGMVEG-AEKTAFAWVPLGELLLAVSEAGRR 186

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BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A7S0E5L3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E5L3_9CRYP)

HSP 1 Score: 62.4 bits (150), Expect = 7.610e-7
Identity = 59/187 (31.55%), Postives = 81/187 (43.32%), Query Frame = 1

Query:  823 KGITAGFCKQDIVPAGLLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRG------------------KRVFECRNGGYVMFIAEVDFVPDIMMKLARKE---IVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESR 1320
            K +  GF     V     WSDFGG RE D  DAEETA REF+EE+ GL+ G+      V  S A +   L D S R                   KRVF  +NG Y+ F   + ++  ++ +LAR E   +V G E         DSD                 +EK D+AW+ A  +L  + + +
Sbjct:   62 KELAKGFTIAGKVK--YCWSDFGGKRE-DFEDAEETALREFSEETLGLWGGMGGLEQRVQASVANVRRILNDCSARCAGREEEREAERRAPGNQLKRVFVMKNGSYLTFFLPLPYIDPLLFQLARDENDKLVPGAE--------RDSDTC-------------RCAEKRDWAWLDAEEVLRGVEKGK 224

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot

BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8


Match Name	E-value	Identity	Description
D8LAV2_ECTSI	3.840e-86	48.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JSG8_9PHAE	3.190e-77	44.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3XND0_HETAK	8.280e-20	32.72	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A8J9S0U8_9CHLO	6.670e-14	39.58	Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ...	[more]
A0A7S3VJL3_DUNTE	7.780e-11	45.16	Hypothetical protein n=2 Tax=Dunaliella tertiolect...	[more]
A0A5J4XWS7_9CHLO	1.050e-10	36.88	Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2...	[more]
A0A061QTB2_9CHLO	5.400e-8	34.21	Uncharacterized protein n=1 Tax=Tetraselmis sp. GS...	[more]
A0A7S0E5L3_9CRYP	7.610e-7	31.55	Hypothetical protein n=1 Tax=Hanusia phi TaxID=303...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig54794	contig	H-elongata_contig54794:721..3338 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	77.0
Seed ortholog evalue	2.5e-11
Seed eggNOG ortholog	3075.A0A087SF01
EggNOG OGs	2EZKH@1,2T0WV@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-27_006290.1
Exons	4
Model size	1386
Cds size	1386
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig54794.12878.1	prot_H-elongata_contig54794.12878.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig54794 721..3338 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930893.7258997-CDS-H-elongata_contig54794:720..922	1622930893.7258997-CDS-H-elongata_contig54794:720..922	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 721..922 +
1691679614.775844-CDS-H-elongata_contig54794:720..922	1691679614.775844-CDS-H-elongata_contig54794:720..922	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 721..922 +
1622930893.7511408-CDS-H-elongata_contig54794:1239..2048	1622930893.7511408-CDS-H-elongata_contig54794:1239..2048	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 1240..2048 +
1691679614.788143-CDS-H-elongata_contig54794:1239..2048	1691679614.788143-CDS-H-elongata_contig54794:1239..2048	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 1240..2048 +
1622930893.7744694-CDS-H-elongata_contig54794:2453..2691	1622930893.7744694-CDS-H-elongata_contig54794:2453..2691	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 2454..2691 +
1691679614.8010392-CDS-H-elongata_contig54794:2453..2691	1691679614.8010392-CDS-H-elongata_contig54794:2453..2691	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 2454..2691 +
1622930893.7944672-CDS-H-elongata_contig54794:3201..3338	1622930893.7944672-CDS-H-elongata_contig54794:3201..3338	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 3202..3338 +
1691679614.812203-CDS-H-elongata_contig54794:3201..3338	1691679614.812203-CDS-H-elongata_contig54794:3201..3338	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54794 3202..3338 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig54794:721..3338+
coding sequence from alignment at H-elongata_contig54794:721..3338+

protein sequence of mRNA_H-elongata_contig54794.12878.1

>prot_H-elongata_contig54794.12878.1 ID=prot_H-elongata_contig54794.12878.1|Name=mRNA_H-elongata_contig54794.12878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=462bp
PVPAERPPYLAAGVLPFCVLGGDLLFLLGQQLRFRSRGRGSSFSEIEGAL
TSSDGVVAATNTTDTASCPRTKLSPPAPPWTADGPLIDDPSGSSCRLPPS
SVVEASLEGIEQRVSPFTPLSSSALPSGIVGDTTPGGPPGAVSTSTARGT
PQTEDTALLEATAVAGSSTPVAAAAGARQAGTNGDIGNYITKAESSKRGS
PPPLNGWVLHDRGNTGVTVAPRRTVPIPAVEPFDAATAAVTTLTTASLKT
EAYRQTPPVTRADSTVNEREKLEEKGITAGFCKQDIVPAGLLWSDFGGGR
EADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLR
GKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDS
DEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVR
LGDCRYLRLFHK

mRNA from alignment at H-elongata_contig54794:721..3338+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig54794.12878.1 ID=mRNA_H-elongata_contig54794.12878.1|Name=mRNA_H-elongata_contig54794.12878.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2618bp|location=Sequence derived from alignment at H-elongata_contig54794:721..3338+ (Himanthalia elongata Himel1 dioecious)
CCTGTGCCAGCCGAGCGTCCTCCTTATCTCGCAGCCGGTGTGCTTCCTTT
CTGTGTCCTCGGAGGTGACCTCTTGTTTTTGCTCGGGCAGCAGCTCAGAT
TTCGCTCACGAGGGCGGGGATCCTCCTTCTCAGAGATTGAAGGCGCTTTG
ACTTCTTCGGACGGCGTTGTCGCCGCCACCAACACCACTGACACTGCCAG
TTGTCGCCCCTTGCGCAGCGGTTGTAACATGGAGATTTGCGTGAGTTTCA
ACAAACGAATACAAATGTGTCCAACCAGTAGTATAGTATAATAGTATAAT
AGTTAAGCGCATTTCGCGCGAAACATCCATGCTTAGCCGTTACCATTCAT
GATTAGCCGATGTCATCATGTCATCTCATGAGATTACGAAACTACGAAGT
GCTGGTATCCATCTCATGAGATCGCCCCGCTCTCGTTCGTCCAAAATCCA
TCGCCCCGCTCTCTGCCCATGTTTACTCTCTCGCCGGAAAGGTCCCTCCA
GCTCGACGGCCGCGACGAGGCCCGCGCACGAAACTGTCGCCGCCGGCACC
GCCATGGACAGCTGATGGTCCGCTCATAGACGACCCTTCTGGATCAAGCT
GTCGCCTACCACCATCCTCCGTCGTGGAGGCGTCGCTCGAGGGGATTGAA
CAGCGTGTATCCCCTTTCACACCTTTGTCCTCTTCGGCGTTGCCATCCGG
AATTGTCGGCGATACTACACCTGGGGGTCCACCCGGAGCCGTGTCGACGA
GCACAGCTCGTGGCACGCCGCAGACCGAAGACACGGCGCTGCTCGAGGCG
ACAGCGGTCGCGGGGTCGAGTACGCCAGTGGCCGCCGCAGCGGGAGCTAG
GCAAGCTGGAACGAACGGAGACATCGGGAATTATATAACCAAGGCCGAGT
CGTCCAAACGCGGCTCTCCTCCCCCCTTGAACGGTTGGGTACTCCACGAC
AGAGGGAATACGGGCGTAACCGTTGCACCCCGGCGCACGGTCCCGATCCC
CGCCGTTGAGCCTTTTGACGCCGCAACCGCAGCCGTAACGACCTTAACCA
CCGCCTCGCTTAAGACCGAAGCTTATCGACAGACGCCACCGGTAACAAGA
GCAGACTCGACAGTTAATGAACGGGAGAAGCTTGAGGAAAAAGGAATCAC
CGCCGGCTTCTGCAAGCAAGACATCGTACCGGCGGGCCTGCTGTGGTCTG
ACTTCGGGGGCGGCAGAGAGGCGGATGACGCTGACGCGGAGGAGACCGCC
AGCAGAGAGTTCGCGGAAGAGAGCTTCGGTTTGTTCAACGGGGTGCGGCT
GCAAAGCGACAGTGTCGCTCGGAGCCAGGTATTGGTATGCACGCACAGAG
CTCCCCCGCGTCGGGGCGGCATGGAAACAAGACGGTTGTTACGGTGTAAT
GTATATGGGAGGGCGGTTGATTGTACCTGCCCACTGTGTTTGGCCCGGAG
GCGATTTTCCACTGTCGTGCCTGTTCAGCTCTAGTCAGTTTCGAGGGTGC
CTTGGTGGTGTGGTACTGTTGCATACTCTACAGACTAATCTTTCAGCACG
GGCGTGCGCAGCTGCCCCGCCCCTCCCAGCCGTAAGCGAAAATCGTAACC
TCGAGTGACTTGTTAGCGCAAGGGTAAAAATTACGGCAATAGGGTGGCGG
CGGCGAACGGTTCTCGGTTCTTTTTGAGCCCTTAAAAACAATAACCCGCA
TTTGCCTACACGTTTCCTCCCGCCCGCCTCTAGGCAACGATGGCGACGGC
TCTCAGAGATCCATCCCTAAGAGGCAAGCGCGTCTTCGAGTGCCGTAACG
GAGGCTACGTGATGTTCATCGCCGAGGTCGACTTCGTGCCGGACATAATG
ATGAAGCTCGCGCGGAAAGAGATCGTGGACGGCGGCGAGGGTGGCACCGG
AAAAGACGGGAAGAACGACAGCGACGAGGTTGGCAACGGGACAGATTCCG
CATCCACACCCGCGTCCGAAGGTAGTATTTAATTTCCAACGAAACGGCTA
TCGTGGTTTAACGCTTGTGGTTCTAATTTCCAGTACACTATAAGGTTCTA
TAGACTCACACGCCCACACACAGTATACTTCTTTATTTCTGTTTCCGTGA
CTGGTATAGTAATATACGTAGTAGTAATATGGAGAAAGTGTCGAGGACCC
CCGGGACATTATTCCCCGCCGCCCTCCTGGGTGTATTGAGTTTTTCGACG
GACTTGAGAGAGGCATCACCCGACCCGATCAGACCCAACCCGCTCCGATG
ACCGCCTTCTATTAATATCTACTATGTATTACGTAAGGTATGCCGGCAAA
CGATCATGCGAATCATTTTCACTCCTGTTCGGTAATATGAAATGAAATGA
AATGAAATCAAACCAAACCAATTTTAATCCAATTTCACATTATAAAGTAC
TAACACTCCCTCCCCTTCCCCCTCAACCCCGGATGTCCGCGATACCGAGC
GAGACAGGGCGGGCATCATCCCTTGAGGGAGGATTCAGCGAAAAGACGGA
CTTCGCGTGGGTACCGGCGGCCAGCCTCCTGACGGCGATGCGGGAGAGCC
GAAATCGTTCCACCAGGCGCGTAGTAGTAAGGCTCGGGGACTGTCGCTAC
CTCAGGCTATTCCACAAA

Coding sequence (CDS) from alignment at H-elongata_contig54794:721..3338+

>mRNA_H-elongata_contig54794.12878.1 ID=mRNA_H-elongata_contig54794.12878.1|Name=mRNA_H-elongata_contig54794.12878.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2772bp|location=Sequence derived from alignment at H-elongata_contig54794:721..3338+ (Himanthalia elongata Himel1 dioecious)
CCTGTGCCAGCCGAGCGTCCTCCTTATCTCGCAGCCGGTGTGCTTCCTTT
CTGTGTCCTCGGAGGTGACCTCTTGTTTTTGCTCGGGCAGCAGCTCAGAT
TTCGCTCACGAGGGCGGGGATCCTCCTTCTCAGAGATTGAAGGCGCTTTG
ACTTCTTCGGACGGCGTTGTCGCCGCCACCAACACCACTGACACTGCCAG
TTCCTGTGCCAGCCGAGCGTCCTCCTTATCTCGCAGCCGGTGTGCTTCCT
TTCTGTGTCCTCGGAGGTGACCTCTTGTTTTTGCTCGGGCAGCAGCTCAG
ATTTCGCTCACGAGGGCGGGGATCCTCCTTCTCAGAGATTGAAGGCGCTT
TGACTTCTTCGGACGGCGTTGTCGCCGCCACCAACACCACTGACACTGCC
AGTTGCCCGCGCACGAAACTGTCGCCGCCGGCACCGCCATGGACAGCTGA
TGGTCCGCTCATAGACGACCCTTCTGGATCAAGCTGTCGCCTACCACCAT
CCTCCGTCGTGGAGGCGTCGCTCGAGGGGATTGAACAGCGTGTATCCCCT
TTCACACCTTTGTCCTCTTCGGCGTTGCCATCCGGAATTGTCGGCGATAC
TACACCTGGGGGTCCACCCGGAGCCGTGTCGACGAGCACAGCTCGTGGCA
CGCCGCAGACCGAAGACACGGCGCTGCTCGAGGCGACAGCGGTCGCGGGG
TCGAGTACGCCAGTGGCCGCCGCAGCGGGAGCTAGGCAAGCTGGAACGAA
CGGAGACATCGGGAATTATATAACCAAGGCCGAGTCGTCCAAACGCGGCT
CTCCTCCCCCCTTGAACGGTTGGGTACTCCACGACAGAGGGAATACGGGC
GTAACCGTTGCACCCCGGCGCACGGTCCCGATCCCCGCCGTTGAGCCTTT
TGACGCCGCAACCGCAGCCGTAACGACCTTAACCACCGCCTCGCTTAAGA
CCGAAGCTTATCGACAGACGCCACCGGTAACAAGAGCAGACTCGACAGTT
AATGAACGGGAGAAGCTTGAGGAAAAAGGAATCACCGCCGGCTTCTGCAA
GCAAGACATCGTACCGGCGGGCCTGCTGTGGTCTGACTTCGGGGGCGGCA
GAGAGGCGGATGACGCTGACGCGGAGGAGACCGCCAGCAGAGAGTTCGCG
GAAGAGAGCTTCGGTTTGTTCAACGGGGTGCGGCTGCAAAGCGACAGTGT
CGCTCGGAGCCAGGCCCGCGCACGAAACTGTCGCCGCCGGCACCGCCATG
GACAGCTGATGGTCCGCTCATAGACGACCCTTCTGGATCAAGCTGTCGCC
TACCACCATCCTCCGTCGTGGAGGCGTCGCTCGAGGGGATTGAACAGCGT
GTATCCCCTTTCACACCTTTGTCCTCTTCGGCGTTGCCATCCGGAATTGT
CGGCGATACTACACCTGGGGGTCCACCCGGAGCCGTGTCGACGAGCACAG
CTCGTGGCACGCCGCAGACCGAAGACACGGCGCTGCTCGAGGCGACAGCG
GTCGCGGGGTCGAGTACGCCAGTGGCCGCCGCAGCGGGAGCTAGGCAAGC
TGGAACGAACGGAGACATCGGGAATTATATAACCAAGGCCGAGTCGTCCA
AACGCGGCTCTCCTCCCCCCTTGAACGGTTGGGTACTCCACGACAGAGGG
AATACGGGCGTAACCGTTGCACCCCGGCGCACGGTCCCGATCCCCGCCGT
TGAGCCTTTTGACGCCGCAACCGCAGCCGTAACGACCTTAACCACCGCCT
CGCTTAAGACCGAAGCTTATCGACAGACGCCACCGGTAACAAGAGCAGAC
TCGACAGTTAATGAACGGGAGAAGCTTGAGGAAAAAGGAATCACCGCCGG
CTTCTGCAAGCAAGACATCGTACCGGCGGGCCTGCTGTGGTCTGACTTCG
GGGGCGGCAGAGAGGCGGATGACGCTGACGCGGAGGAGACCGCCAGCAGA
GAGTTCGCGGAAGAGAGCTTCGGTTTGTTCAACGGGGTGCGGCTGCAAAG
CGACAGTGTCGCTCGGAGCCAGGCAACGATGGCGACGGCTCTCAGAGATC
CATCCCTAAGAGGCAAGCGCGTCTTCGAGTGCCGTAACGGAGGCTACGTG
ATGTTCATCGCCGAGGTCGACTTCGTGCCGGACATAATGATGAAGCTCGC
GCGGAAAGAGATCGTGGACGGCGGCGAGGGTGGCACCGGAAAAGACGGGA
AGAACGACAGCGACGAGGTTGGCAACGGGACAGATTCCGCATCCACACCC
GCGTCCGAAGGCAACGATGGCGACGGCTCTCAGAGATCCATCCCTAAGAG
GCAAGCGCGTCTTCGAGTGCCGTAACGGAGGCTACGTGATGTTCATCGCC
GAGGTCGACTTCGTGCCGGACATAATGATGAAGCTCGCGCGGAAAGAGAT
CGTGGACGGCGGCGAGGGTGGCACCGGAAAAGACGGGAAGAACGACAGCG
ACGAGGTTGGCAACGGGACAGATTCCGCATCCACACCCGCGTCCGAAGGA
TTCAGCGAAAAGACGGACTTCGCGTGGGTACCGGCGGCCAGCCTCCTGAC
GGCGATGCGGGAGAGCCGAAATCGTTCCACCAGGCGCGTAGTAGTAAGGC
TCGGGGACTGTCGCTACCTCAGGCTATTCCACAAAGATTCAGCGAAAAGA
CGGACTTCGCGTGGGTACCGGCGGCCAGCCTCCTGACGGCGATGCGGGAG
AGCCGAAATCGTTCCACCAGGCGCGTAGTAGTAAGGCTCGGGGACTGTCG
CTACCTCAGGCTATTCCACAAA