prot_H-elongata_contig11637.1287.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11637.1287.1
Unique Nameprot_H-elongata_contig11637.1287.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A6H5L214_9PHAE (Plug_translocon domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5L214_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.140e-18
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPV+ Q
Sbjct:  226 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVKYQ 269          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A4D9D8Z0_9STRA (Plug_translocon domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z0_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.960e-17
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            MRAL+EAFYRQNLPN+TNLLAT LVFI+VIYFQGWRVDLPV+ Q
Sbjct:  228 MRALKEAFYRQNLPNVTNLLATVLVFIIVIYFQGWRVDLPVKSQ 271          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: F0YCV0_AURAN (Plug_translocon domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCV0_AURAN)

HSP 1 Score: 80.9 bits (198), Expect = 2.410e-16
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    2 RALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            RALQEAFYRQNLPN+TNLLAT  VF+VVIYFQGWRVDLPV+ Q
Sbjct:  227 RALQEAFYRQNLPNLTNLLATMFVFVVVIYFQGWRVDLPVKYQ 269          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A7S2XXJ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.340e-16
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            +RAL+EAFYRQNLPN+TNL+AT LVF++VIYFQGWRVDLPV+ Q
Sbjct:  226 VRALKEAFYRQNLPNLTNLMATVLVFVIVIYFQGWRVDLPVKYQ 269          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A067BTU3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BTU3_SAPPC)

HSP 1 Score: 79.3 bits (194), Expect = 4.390e-16
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            MRAL+EAFYRQNLPN+TNLLAT LVFIVVIYFQG+R+DLPV+ Q
Sbjct:   81 MRALKEAFYRQNLPNVTNLLATILVFIVVIYFQGFRIDLPVKYQ 124          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A7S4MCE0_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4MCE0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.610e-15
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            +RAL+EA YRQNLPN+TNL+AT LVF+VVIYFQGWRVDLPV+ Q
Sbjct:  226 VRALKEALYRQNLPNLTNLMATVLVFVVVIYFQGWRVDLPVKYQ 269          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A392Q9R7_9FABA (Protein transport protein SEC61 subunit alpha (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392Q9R7_9FABA)

HSP 1 Score: 73.6 bits (179), Expect = 1.870e-15
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            +RAL+EAFYRQNLPN+TNLLAT L+F++VIYFQG+RV LPVR +
Sbjct:   62 VRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSK 105          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A7S1D8Y6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8Y6_CYCTE)

HSP 1 Score: 77.8 bits (190), Expect = 2.200e-15
Identity = 33/44 (75.00%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            +RAL+EA YRQNLPN+TNL+AT L+F++VIYFQGWRVDLPV+ Q
Sbjct:  232 VRALREALYRQNLPNLTNLMATVLIFVIVIYFQGWRVDLPVKYQ 275          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A024GJP5_9STRA (Uncharacterized protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GJP5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.300e-15
Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            +RAL+EAFYRQNLPN+TNLLAT LVF+VVIYFQG+RVDLPV+ Q
Sbjct:  374 LRALKEAFYRQNLPNVTNLLATMLVFVVVIYFQGFRVDLPVKYQ 417          
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Match: A0A6V2TM26_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TM26_HETAK)

HSP 1 Score: 77.8 bits (190), Expect = 3.010e-15
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    2 RALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQ 44
            RA++EAFYRQNLPN+TNL+AT  VFI+VIYFQGWRVDLPV+ Q
Sbjct:  227 RAVKEAFYRQNLPNLTNLMATVFVFIIVIYFQGWRVDLPVKYQ 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11637.1287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L214_9PHAE1.140e-1895.45Plug_translocon domain-containing protein n=3 Tax=... [more]
A0A4D9D8Z0_9STRA1.960e-1786.36Plug_translocon domain-containing protein n=2 Tax=... [more]
F0YCV0_AURAN2.410e-1686.05Plug_translocon domain-containing protein n=1 Tax=... [more]
A0A7S2XXJ1_9STRA3.340e-1679.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A067BTU3_SAPPC4.390e-1684.09Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A7S4MCE0_9STRA1.610e-1579.55Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A392Q9R7_9FABA1.870e-1575.00Protein transport protein SEC61 subunit alpha (Fra... [more]
A0A7S1D8Y6_CYCTE2.200e-1575.00Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A024GJP5_9STRA2.300e-1581.82Uncharacterized protein n=2 Tax=Albugo TaxID=65356... [more]
A0A6V2TM26_HETAK3.010e-1579.07Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023201SecY domain superfamilyGENE3D1.10.3370.10coord: 1..57
e-value: 1.5E-10
score: 42.3
IPR023201SecY domain superfamilySUPERFAMILY103491Preprotein translocase SecY subunitcoord: 4..43
IPR002208SecY/SEC61-alpha familyPANTHERPTHR10906SECY/SEC61-ALPHA FAMILY MEMBERcoord: 1..44
NoneNo IPR availablePANTHERPTHR10906:SF28coord: 1..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11637contigH-elongata_contig11637:2487..2678 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11637.1287.1mRNA_H-elongata_contig11637.1287.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11637 1938..3781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11637.1287.1 ID=prot_H-elongata_contig11637.1287.1|Name=mRNA_H-elongata_contig11637.1287.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MRALQEAFYRQNLPNITNLLATALVFIVVIYFQGWRVDLPVRRQLDFVLE
IMYVVYVYVPSRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023201SecY_dom_sf
IPR002208SecY/SEC61-alpha