prot_H-elongata_contig54774.12873.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54774.12873.1
Unique Nameprot_H-elongata_contig54774.12873.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length278
Homology
BLAST of mRNA_H-elongata_contig54774.12873.1 vs. uniprot
Match: D8LMW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMW6_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.200e-97
Identity = 175/278 (62.95%), Postives = 201/278 (72.30%), Query Frame = 0
Query:    1 QSDAAARAAAKSKAVSLGRIKA-VAADGAGARERKFVPFPDQARPPPPRVTKRVKTWRDVEAMQAQVFSLKPQKESNVRKISVEKRAMEDFVGFLKETGFRNHRCALLFGRINAATKAIKVEAMFEPPQGAADSSIDGDRDNSGSYFDSSALLEXXXXXXXXAREHFMAARDVITAAAVQLMSMADKGRDEGVLVATVTVPVNATDGEVATEAFSVSNQTVQMFSEGLLAEKQPEPASDRVTTTAVVREDGTETRTPETLGLICNVAIVQHEGVLRTR 277
            +SD+AARAAAK+K+ +LGR+KA V  D  G    KFVPFP  ARPPPPR TKRVKTW+D+EAMQAQ FSLKPQK+SNV+KISVE+ AM+DFVG+LK+TG R HRCALLFGR++ +T  +K                                           REHFMAA DV TAAA+QLMSMADKG++EGVLVATVTVPVNAT GE+ATEAFSVSNQTVQMFSEG+L   QPEP + RV TTA V+E   ET TPETLGLICNVAIVQHEGVL+TR
Sbjct:  153 KSDSAARAAAKAKSDALGRMKAAVVGDKTGGS--KFVPFPQHARPPPPRATKRVKTWQDIEAMQAQTFSLKPQKDSNVKKISVEQSAMDDFVGYLKQTGLRKHRCALLFGRVSPSTNGVK-------------------------------------------REHFMAAADVATAAALQLMSMADKGKEEGVLVATVTVPVNATTGEMATEAFSVSNQTVQMFSEGVLGHHQPEPTAGRVATTAAVKEGSKETTTPETLGLICNVAIVQHEGVLQTR 385          
BLAST of mRNA_H-elongata_contig54774.12873.1 vs. uniprot
Match: H3GFY1_PHYRM (Uridine kinase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFY1_PHYRM)

HSP 1 Score: 87.4 bits (215), Expect = 1.050e-15
Identity = 66/217 (30.41%), Postives = 108/217 (49.77%), Query Frame = 0
Query:   67 FSLKPQKESNVRKISVEKRAMEDFVGFLKETGFRNHRCALLFGRINAATKAIKVEAMFEPPQGAADSSI----DGDRDNSGSYFDSSALLEXXXXXXXXARE----HFMAARDVITAAAVQLMSMADKGRDEGVLVATVTVPVNATDGEVATEAFSVSNQTVQMFSEGLLAEKQPEPASDRVTTTAVVREDGTETRTPETLGLICNVAIVQHEGVLR 275
            F +  QKE  V K+ ++  +  DF  +L++  F+  RC  L+G ++A TK   VE ++EPPQ           D D D   +  ++    +         RE    HF +AR+V+ AA +Q    AD G  E + + T+ V ++  +G+ + EAF VS+Q V+MF+ G+LAE +  P +  V  T  V  +    +  +    +C V ++ HE  LR
Sbjct:  137 FKISAQKEPQVAKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVDAETKEATVEFIYEPPQEGNPYGFEVLDDPDADKVDAVAEALGFEKVGWVFSHPPREDEDFHF-SAREVLLAAQLQ----ADAGGKESLFL-TLKVTLDK-EGQASFEAFQVSDQCVEMFAAGVLAENEQNPKACAVNDTFTVLVEAKPAKEVDNNFFLCVVPVLPHESTLR 346          
BLAST of mRNA_H-elongata_contig54774.12873.1 vs. uniprot
Match: A0A5D6XRK4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRK4_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 7.200e-13
Identity = 61/218 (27.98%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   67 FSLKPQKESNVRKISVEKRAMEDFVGFLKETGFRNHRCALLFGRINAATKAIKVEAMFEPPQGAADSSIDGDRDNSGSYFDSSALL----EXXXXXXXXARE----HFMAARDVITAAAVQLMSMADKGRDEGVLVATVTVPVNATDGEVATEAFSVSNQTVQMFSEGLLAEKQPEPASDRVTTTAVVREDGTETRTPETLGLICNVAIVQHEGVLRT 276
            + +  QK ++  K+ ++  +  DF  +L++  F+  RC  L+G ++A TK + V+ ++EPPQ       +   D      D+ A      +         RE    HF +A +V+ AA +Q    AD G  + + V T+ V ++  DG+ + EAF VS+Q V+MFS G L E + +P S  +  T     +     T +    +C V +  HE  L++
Sbjct:  137 YKISAQKSAHAAKVVLDAASCNDFQAYLRQFAFQQSRCGWLYGSVDAETKEVTVDFIYEPPQHGTPHGFEVLDDPHAERVDAVAEALGREKVGWVFSHPPREDDTFHF-SAHEVLLAAQLQ----ADAGGSDSLFV-TLKVTLDK-DGQASFEAFQVSDQCVEMFSAGALVEHEEDPKSCGIAATFTALVEAKPAPTVDNNFFLCVVPVATHESGLKS 347          
BLAST of mRNA_H-elongata_contig54774.12873.1 vs. uniprot
Match: A0A329S327_9STRA (MPN domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A329S327_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.790e-12
Identity = 61/216 (28.24%), Postives = 103/216 (47.69%), Query Frame = 0
Query:   67 FSLKPQKESNVRKISVEKRAMEDFVGFLKETGFRNHRCALLFGRINAATKAIKVEAMFEPPQGAADSSI----DGDRDNSGSYFDSSALLEXXXXXXXXARE----HFMAARDVITAAAVQLMSMADKGRDEGVLVATVTVPVNATDGEVATEAFSVSNQTVQMFSEGLLAEKQPEPASDRVTTTAVVREDGTETRTPETLGLICNVAIVQHEGVL 274
            F +  QKE  V K+ ++  +  DF  +L++  F+  RC  L+G ++A TK + V+ ++EPPQ           D + D   +  ++    +         RE    HF +AR+++ AA +Q    AD G  +G L  T+ V ++   G+ + EAF +S+Q V+MF+ G L E +  P +  V  T     +       +    +C V +V HE  L
Sbjct:  137 FKISAQKEPQVAKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVDAETKEVTVDFIYEPPQEGNPYGFEVLDDPNADKVDAVAEALGYEKVGWVFSHPPREDDDFHF-SAREILLAAQLQ----ADAG-GKGSLFLTLKVTLDK-QGQASFEAFQISDQCVEMFAAGALMENEQNPKACAVNDTFTALVEAKPATEVDNNFFLCVVPVVPHESPL 345          
BLAST of mRNA_H-elongata_contig54774.12873.1 vs. uniprot
Match: B5Y563_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y563_PHATC)

HSP 1 Score: 61.6 bits (148), Expect = 3.900e-7
Identity = 65/232 (28.02%), Postives = 103/232 (44.40%), Query Frame = 0
Query:   55 TWRDVEAMQAQV-FSLKPQKESNVRKISVEKRAMEDFVGFLKETGFRNHRCALLFGRI-------NAATKAIKVEAMFEPPQGAADSSIDG-------DRDNSGSYFDSSALLEXXXXXXXXAREHF-MAARDVITAAAVQLMSMADKGRDEGVLVATVTVPVNATDGEVATEAFSVSNQTVQMFSEGLLAEKQPEPASDRVTTTAVVREDGTETRTPETLGLICNVAIVQH 270
            T  D  A+ +Q  F ++ Q+++   K+S++  ++ +F  +L+   F+  RC  L+G+           TK + VEA++EPPQ     S +G         +      +   L           R+ + ++A + I AA  QL +    G  E     TVTV     DG+VA EAF VS Q + M +E  L      P   +V  T    ++G  + T ET   +  V IVQH
Sbjct:  152 TLNDFIALDSQFEFKIQRQEKATTSKVSLDVPSISNFQTYLQRFQFQRKRCGFLYGKFVKEDESDEKPTKVL-VEAIYEPPQEINPDSAEGFTLEDDPQEEEVNQLAEWLGLQRVGWVFGHAPRQGYVLSAAETILAAEFQLEAA---GGVEETPFCTVTVAPKL-DGQVAVEAFQVSQQCMAMVAEEALQVDPDNPQLCKVNETFTAIQEGKASPTVETAFFLTVVPIVQH 378          
BLAST of mRNA_H-elongata_contig54774.12873.1 vs. uniprot
Match: A0A662YIT1_9STRA (Ubiquitin-like domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YIT1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 9.760e-6
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   67 FSLKPQKESNVRKISVEKRAMEDFVGFLKETGFRNHRCALLFGRINAATKAIKVEAMFEPPQ 128
            F L  QKE +V K+ ++  +  DF G+L++  F+  RC  L+G ++A +K + V+ ++EPPQ
Sbjct:  137 FKLSAQKEPHVTKVYLDNASCNDFQGYLRQFAFQQSRCGWLYGTVDAESKEVTVDFIYEPPQ 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54774.12873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMW6_ECTSI1.200e-9762.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H3GFY1_PHYRM1.050e-1530.41Uridine kinase n=1 Tax=Phytophthora ramorum TaxID=... [more]
A0A5D6XRK4_9STRA7.200e-1327.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A329S327_9STRA1.790e-1228.24MPN domain-containing protein n=19 Tax=Phytophthor... [more]
B5Y563_PHATC3.900e-728.02Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A662YIT1_9STRA9.760e-637.10Ubiquitin-like domain-containing protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12710NUCLEAR PROTEIN LOCALIZATION 4coord: 62..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54774contigH-elongata_contig54774:923..3854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54774.12873.1mRNA_H-elongata_contig54774.12873.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54774 923..3854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54774.12873.1 ID=prot_H-elongata_contig54774.12873.1|Name=mRNA_H-elongata_contig54774.12873.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp
QSDAAARAAAKSKAVSLGRIKAVAADGAGARERKFVPFPDQARPPPPRVT
KRVKTWRDVEAMQAQVFSLKPQKESNVRKISVEKRAMEDFVGFLKETGFR
NHRCALLFGRINAATKAIKVEAMFEPPQGAADSSIDGDRDNSGSYFDSSA
LLEAAAAAAASAREHFMAARDVITAAAVQLMSMADKGRDEGVLVATVTVP
VNATDGEVATEAFSVSNQTVQMFSEGLLAEKQPEPASDRVTTTAVVREDG
TETRTPETLGLICNVAIVQHEGVLRTR*
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