mRNA_H-elongata_contig54764.12871.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig54764.12871.1
Unique NamemRNA_H-elongata_contig54764.12871.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: A0A6H5JDV3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDV3_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 2.470e-102
Identity = 173/303 (57.10%), Postives = 196/303 (64.69%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPT---------------------------VIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGR-VHRDIKPSNLLINSQGFVKL------------------------ADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAV-----SLPSAAGIVRVWIDSLS 738
            VI  F++ KR QLINEINALYD SHPT                           VI+F+GAFYREGAVTI+TEYMDGGSLLNVL+QVGAVPE  LSS+ YQVLLAL YLK   R VHRDIKPSNLLINSQG VK+                         DFG SA LQ++ AMCG FVGTFKYMSPERMKNE+YSYSSD+WSLGLV+MECAT  +PY+DE TAIDL QTIVD PAP LDP+ F    C F   CL K P +R PA++L+ +PW+   G        L SA   V+ WIDS S
Sbjct:   65 VINMFEKGKRHQLINEINALYDASHPTEFHTGVNNYVLCSSLFGWCITPFCEWSVIQFLGAFYREGAVTIITEYMDGGSLLNVLRQVGAVPERALSSVAYQVLLALDYLKREKRIVHRDIKPSNLLINSQGVVKVXXXXXXXXXXXXXXXXXXXXXXXXTDFGTSAGLQSSFAMCGTFVGTFKYMSPERMKNERYSYSSDVWSLGLVLMECATGEFPYRDETTAIDLVQTIVDAPAPELDPSSFPANFCSFVADCLRKRPDDRSPAQALLGAPWITGGGLAVNLNADLVSATANVKRWIDSPS 367          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: A0A835Z9W7_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W7_9STRA)

HSP 1 Score: 296 bits (759), Expect = 2.210e-97
Identity = 145/244 (59.43%), Postives = 179/244 (73.36%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWIDS 732
            VI  FD+ KR QLI EINALY+    ++I+F GAFYREGA+TI  EYMDGGSL NVL QVG +PE  L++I YQ+L  L Y++   RVHRD+KPSNLLINS G VK+ DFG+SA LQN++AMCG FVGTFKYMSPERM++E+YSY SDIWSLGLV++ECAT  YPY  + +AI + QTI+D+ AP  D  +FS   C F   CL K+   RL A+ L+ +PWM  WGA S  +A   VR WI+S
Sbjct:   88 VINMFDKGKRDQLIREINALYNARCDSLIKFYGAFYREGAITIALEYMDGGSLQNVLHQVGLMPEWALANITYQILWGLAYMQHERRVHRDVKPSNLLINSLGQVKVTDFGVSAELQNSMAMCGTFVGTFKYMSPERMRSERYSYDSDIWSLGLVILECATGQYPYAQDASAIAMVQTILDNDAPRADKTKFSAEFCQFIECCLQKDHDKRLKAEVLLGAPWMAKWGATSCAAARANVRSWIES 331          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: H3GTD1_PHYRM (Protein kinase domain-containing protein n=28 Tax=Phytophthora TaxID=4783 RepID=H3GTD1_PHYRM)

HSP 1 Score: 295 bits (754), Expect = 8.560e-97
Identity = 140/245 (57.14%), Postives = 183/245 (74.69%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWIDSL 735
            +I  +D+ KR+Q+I EINAL+D+  P ++ F GAF R+GAV +  EYMDGGSL NV+ Q+G +PEHVL+S+ +Q+L AL YLK + RVHRDIKP N+L+NSQG VKL+DFGI++ L N+IAMCG FVGTF+YMSPER+++ +YSYSSDIWSLGLV+ME AT  YPY    T ID+ Q++++ P P L P  FS   C F   CL K P++R  A +L+ SPW+   GAV+L S+ G VR WIDSL
Sbjct:   74 MINMYDKTKREQIIREINALFDSKCPCLVTFFGAFLRDGAVVLALEYMDGGSLENVIHQLGTIPEHVLASVAFQILHALSYLKTNKRVHRDIKPPNILLNSQGQVKLSDFGIASELGNSIAMCGTFVGTFRYMSPERIQHTQYSYSSDIWSLGLVLMEAATGVYPYPKHKTCIDMLQSVLEAPPPALSPQYFSQDFCDFLQQCLQKNPLDRASADTLLESPWLQRCGAVNLESSIGNVRHWIDSL 318          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: A0A7S2XY35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY35_9STRA)

HSP 1 Score: 293 bits (750), Expect = 4.780e-96
Identity = 138/243 (56.79%), Postives = 181/243 (74.49%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWID 729
            VI  FD++KR+QLI EI  LY+   P+++ F GAFYR+GA+TI  EYM+GG+L NV+ Q+G +PE  L+++ YQ+L AL Y+K   RVHRD+KPSNLLIN  G VKL DFGISA LQ++ +MC  FVGTFKYMSPER++++ YSY+SDIWSLGLV++ECAT  YP+ +E  AID+ QTI++ P P+ DP RFSP  C F   CL K+P NRLPA++L+ SPWM   GA+    A   V+ WI+
Sbjct:   85 VINMFDKSKRKQLIREIETLYNAECPSLVTFYGAFYRQGAITIALEYMEGGALANVVAQMGPIPEAALANMTYQILQALAYMKNQKRVHRDLKPSNLLINGVGQVKLTDFGISAELQSSFSMCATFVGTFKYMSPERIQSKPYSYASDIWSLGLVLLECATGVYPFAEEHAAIDMVQTILEAPVPSPDPDRFSPDFCFFIEQCLQKDPSNRLPAEALLGSPWMQNHGAIGFEKAIENVKDWIE 327          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: A0A7S1Y109_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y109_9STRA)

HSP 1 Score: 291 bits (746), Expect = 3.130e-95
Identity = 141/244 (57.79%), Postives = 173/244 (70.90%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWIDS 732
            +I  FD++KR QL+ EI  LYD   P++I F GAFYREGA+TI  EYMDGGSL NVL Q G +PE  L+++ +Q+L  L YL    RVHRDIKPSN+LINS G VK+ DFGISA L N+IAMCG FVGTFKYMSPER++N  YSYSSD+WS GLVV+EC+T  YPY +E T ID+ QTI++ P P+L   RFSP LC F    L K+P  RLP +  + +PW++  GA SL  A   V  WI S
Sbjct:  100 IINMFDKSKRSQLLREIGTLYDAQCPSLISFFGAFYREGAITIALEYMDGGSLSNVLAQAGPIPEQPLANVAFQILWGLAYLHHENRVHRDIKPSNILINSNGQVKITDFGISAELANSIAMCGTFVGTFKYMSPERIQNRPYSYSSDLWSFGLVVVECSTGAYPYPEESTPIDMVQTILEAPQPSLPRDRFSPDLCAFVDHALAKDPERRLPGEVFLGAPWLSQCGAHSLDHAVHNVLTWIRS 343          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: K3X6B5_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6B5_GLOUD)

HSP 1 Score: 284 bits (726), Expect = 1.410e-92
Identity = 135/245 (55.10%), Postives = 177/245 (72.24%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWIDSL 735
            +I  +D+ KR+Q+I EINAL+D++ P ++ F GAF R+ AV +  E+MDGGSL NV+ Q+G +PEHVL SI YQ+L +L YLK H RVHRDIKP N+L+NS+G VKL+DFGI+  L N+IAMCG FVGTF+YMSPER++   YSYSSDIWSLGLV+ME AT  YPY    T I++ Q++++ P PTL    FS   C F   CL K+P++R  A  L+ SPW++  GA++L SA   V  WI SL
Sbjct:   71 MINMYDKGKREQIIREINALFDSNCPCLVTFYGAFLRDNAVVLALEFMDGGSLENVIHQLGTIPEHVLGSIAYQILYSLSYLKTHKRVHRDIKPPNILLNSRGEVKLSDFGIATELCNSIAMCGTFVGTFRYMSPERIQRAPYSYSSDIWSLGLVLMEAATGVYPYPKHKTCIEMIQSVLESPPPTLSSEYFSREFCEFLQRCLQKQPLDRASAGVLLESPWLHRCGAINLESAVSNVHQWIQSL 315          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: A0A7S3HFG8_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFG8_9STRA)

HSP 1 Score: 281 bits (720), Expect = 2.230e-91
Identity = 143/246 (58.13%), Postives = 175/246 (71.14%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWIDSLS 738
            +I  FDR+KR+QLI EI  LYD   P +I F GAFYREG++TI  EYMDGGSL NVL QVG +PE VL+++ +Q+L  L YLK   RVHRD+KPSNLLINS+G VK+ DFG+SA LQN+IAMCG FVGTFKYMSPER++N  YSY+SDIWSLGLV+MECAT  YP+ +    I++ QTI+D   P L P  FS   C F   CL K P  RLPA+ L+ SPW+  +GA S   A   V  WI  ++
Sbjct:   90 IINLFDRSKREQLIREIVTLYDAQCPNLITFYGAFYREGSITIALEYMDGGSLANVLAQVGPIPERVLANMAFQILWGLAYLKHDKRVHRDLKPSNLLINSRGEVKVTDFGVSAELQNSIAMCGTFVGTFKYMSPERIRNLPYSYASDIWSLGLVLMECATGRYPFHEHNNCIEVAQTILDAEIPDL-PKGFSIEFCDFLKQCLHKNPDARLPAEVLLGSPWLLQYGATSPELATEHVYNWIRRIT 334          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: F0YK22_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK22_AURAN)

HSP 1 Score: 273 bits (698), Expect = 2.090e-88
Identity = 138/243 (56.79%), Postives = 172/243 (70.78%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWID 729
            VI  F+R+KR QLI EI +LYD   P +I F GAFYREGA++I  E+M+GGSL NV+ QVGA+PE  L+ I +Q+L  L YLK   RVHRDIKPSNLLINS G VK+ DFG+SA L N+IAMCG FVGTFKYMSPER+ +  YS++SDIWS GLV++ECA   YPY +E T I + QTI++  +PT  P   S     F   CL KEP  RLPA+ L+ +PW+   GAVS  S+   ++VWID
Sbjct:   66 VINMFERSKRDQLIREIKSLYDCECPAIIGFYGAFYREGAISIALEFMNGGSLANVVSQVGALPEEALAHISFQILYGLAYLKKQKRVHRDIKPSNLLINSNGEVKVTDFGVSATLGNSIAMCGTFVGTFKYMSPERICSAPYSFASDIWSTGLVLLECAMGIYPYPEENTCIGMAQTILEANSPT-PPVGSSLEFVDFITQCLHKEPSKRLPAEILLAAPWLQRRGAVSRRSSVAALKVWID 307          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: A0A6G0X050_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X050_9STRA)

HSP 1 Score: 271 bits (692), Expect = 3.300e-87
Identity = 131/244 (53.69%), Postives = 172/244 (70.49%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWIDS 732
            +I  FD+ KR+QL+ EI+AL+D+    ++ F GAF ++ AV +  EYMDGGSL NV+ Q+GAVPEH+L +I YQ+L  L YLK   RVHRDIKPSN+L+NS+G VKL DFGI+  L+N+IAMCG+FVGTFKYMSPER++   YSY+SDIWSLGLV+ME AT  YPYQ   +AID+ Q++++ P P L    FSP    F G CL + P +R     L+ +PW++  GA  L SA   V  WI +
Sbjct:   86 LINMFDKGKREQLMREIHALFDSECLCLVTFYGAFLKDSAVALALEYMDGGSLENVIHQLGAVPEHILGNITYQILYGLSYLKSKKRVHRDIKPSNILLNSRGEVKLTDFGIATELRNSIAMCGSFVGTFKYMSPERIQRLPYSYTSDIWSLGLVLMESATGHYPYQQPKSAIDMIQSVLESPPPWLSRDYFSPEFVSFVGHCLHQSPTDRAAVDDLLTAPWLHRCGAFDLSSARRNVFEWISN 329          
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Match: A0A6V1SQ10_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SQ10_HETAK)

HSP 1 Score: 270 bits (691), Expect = 4.680e-87
Identity = 131/243 (53.91%), Postives = 174/243 (71.60%), Query Frame = 1
Query:    1 VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDGGSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLINSQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIWSLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFAGGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWID 729
            VI  FD++KR QLI EI  LY+   P++I F GAFYREG++TI  EYM+GGSL NVLKQVG VPE  L+++ YQ+L  L YLK   R+HRD+KP NLLINS+G VKL DFG+S  LQ++I + G FVGTF+YMSPER+++  Y+Y++D+W+LGL ++E AT  YPY+DE TAI + +TIV+   P  D  RFS   C F   CL K+  +RLPA++L+ +PW+ L GA S  +A    R WI+
Sbjct:   88 VINMFDKSKRNQLIQEICTLYNADCPSLITFYGAFYREGSITIALEYMNGGSLANVLKQVGPVPESALANMTYQILWGLAYLKHEKRLHRDLKPGNLLINSKGEVKLTDFGVSRELQSSIELAGTFVGTFRYMSPERIRSRPYNYAADVWALGLCLIEAATGEYPYEDERTAIGMVETIVNSDIPIPDDGRFSSEFCEFLEQCLQKDSQDRLPAEALLGAPWLELHGARSYGAAVLNTRRWIE 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54764.12871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDV3_9PHAE2.470e-10257.10Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835Z9W7_9STRA2.210e-9759.43Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
H3GTD1_PHYRM8.560e-9757.14Protein kinase domain-containing protein n=28 Tax=... [more]
A0A7S2XY35_9STRA4.780e-9656.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1Y109_9STRA3.130e-9557.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K3X6B5_GLOUD1.410e-9255.10Protein kinase domain-containing protein n=1 Tax=G... [more]
A0A7S3HFG8_9STRA2.230e-9158.13Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
F0YK22_AURAN2.090e-8856.79Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A6G0X050_9STRA3.300e-8753.69Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A6V1SQ10_HETAK4.680e-8753.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54764contigH-elongata_contig54764:1291..3675 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.1
Seed ortholog evalue3.7e-78
Seed eggNOG ortholog164328.Phyra80373
EggNOG free text desc.Serine/Threonine protein kinases, catalytic domain
EggNOG OGs3Q9AB@4776,KOG0581@1,KOG0581@2759
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitogen-activated protein kinase kinase (MAP2K)
Ec32 orthologEc-08_005740.1
Exons5
Model size744
Cds size744
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54764.12871.1prot_H-elongata_contig54764.12871.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig54764 1291..3675 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930892.6934013-CDS-H-elongata_contig54764:1290..15331622930892.6934013-CDS-H-elongata_contig54764:1290..1533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 1291..1533 -
1691679614.3456936-CDS-H-elongata_contig54764:1290..15331691679614.3456936-CDS-H-elongata_contig54764:1290..1533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 1291..1533 -
1622930892.7127519-CDS-H-elongata_contig54764:1944..21271622930892.7127519-CDS-H-elongata_contig54764:1944..2127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 1945..2127 -
1691679614.374986-CDS-H-elongata_contig54764:1944..21271691679614.374986-CDS-H-elongata_contig54764:1944..2127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 1945..2127 -
1622930892.7252257-CDS-H-elongata_contig54764:2293..24341622930892.7252257-CDS-H-elongata_contig54764:2293..2434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 2294..2434 -
1691679614.3907976-CDS-H-elongata_contig54764:2293..24341691679614.3907976-CDS-H-elongata_contig54764:2293..2434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 2294..2434 -
1622930892.7602894-CDS-H-elongata_contig54764:3089..31861622930892.7602894-CDS-H-elongata_contig54764:3089..3186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 3090..3186 -
1691679614.4020932-CDS-H-elongata_contig54764:3089..31861691679614.4020932-CDS-H-elongata_contig54764:3089..3186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 3090..3186 -
1622930892.7851298-CDS-H-elongata_contig54764:3595..36751622930892.7851298-CDS-H-elongata_contig54764:3595..3675Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 3596..3675 -
1691679614.4200556-CDS-H-elongata_contig54764:3595..36751691679614.4200556-CDS-H-elongata_contig54764:3595..3675Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54764 3596..3675 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig54764.12871.1

>prot_H-elongata_contig54764.12871.1 ID=prot_H-elongata_contig54764.12871.1|Name=mRNA_H-elongata_contig54764.12871.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp
VIKTFDRAKRQQLINEINALYDTSHPTVIEFVGAFYREGAVTIVTEYMDG
GSLLNVLKQVGAVPEHVLSSIMYQVLLALIYLKGHGRVHRDIKPSNLLIN
SQGFVKLADFGISARLQNAIAMCGAFVGTFKYMSPERMKNEKYSYSSDIW
SLGLVVMECATSTYPYQDEMTAIDLFQTIVDDPAPTLDPARFSPALCGFA
GGCLLKEPVNRLPAKSLIMSPWMNLWGAVSLPSAAGIVRVWIDSLSV*
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mRNA from alignment at H-elongata_contig54764:1291..3675-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig54764.12871.1 ID=mRNA_H-elongata_contig54764.12871.1|Name=mRNA_H-elongata_contig54764.12871.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2385bp|location=Sequence derived from alignment at H-elongata_contig54764:1291..3675- (Himanthalia elongata Himel1 dioecious)
GTGATCAAGACATTTGACAGAGCCAAGCGCCAGCAGCTTATCAATGAGAT CAACGCCCTCTACGATACCAGTCACCCAACGTGAGAATGGGCACAGACAA CATCACGCGCGTGCCAGCTCTTTCACACAAGGATCGTACAGTAGCTGTCA CAAAAATGTCGCGATCCTTGAGAAAACCGAATCAAAACGTGCTGCCCAAG GAGTAACTTAGAAAGAGGTGCGCGATGAAACGATATTACTATGAAAATTC AAGCGATTGGTCAGCTCAACAAACACTACCATGATACTCTATTTACAACA TGTTTGTGCCCAAGCGCCAGGTTTCACAACGACCGGCCACCAACCTTGCA GTAATAGGCGTAATAAACCGTCCGAGAAATATGCCGACTTTCCTCATACC CTTCTCCGCGACAAACTTAACACCCCGGCACCCGCTTGATCATTGTAGAT TGCCGGCTCGCGGCACATGTTCTCCCCACCAAACGGCAGGGTGATCGAGT TCGTGGGGGCTTTCTATCGCGAGGGCGCTGTGACGATTGTTACAGAATAT ATGGATGGGGGCTCCCTCCTGAATGTCCTCAAGCAGGTAGGAAGTACATG ATATTCATGCATACTATATCTTGCGCCTTTAAGAACAAGCTGCAGAGCTC CCTGGACGGACTTCACCTCTGGAAACACAAGCTTCGTGCCTCCTACAAAA TATTCGCTTTAGAAAAGTGTTCCGTACAACATGTCTCCTACAGCAGGCGA AGGTGCGGAACGCATGAAAAATTCTAACCGTCAGAACAGATATAACGTGG GCACTAAGAAGTTACTCGAGAAATTCGATTCTTCCGACCCACTCATTAAA AGTGCCCGACCCACGAGATAGATGGTGTAGAGATATACTGGTACACCATT CATTGTTGTTGTGGCTGATAGCCATAGAGCCTTCTAAGAATGACCCCTCG GTTGGACAAATCATTCCTACCTTTCTCTACAGCCTTGCCGTTATGCGTCC CATAATGTAATACTGTATTAAATAGTCGTGGTGTAAGAGATTTCAAAGAA AACTCGATAAAGCTGTACTTTCCTGGAAAATGTCCTCTGTATTTGGATGG GGGGGGGGGGGTCGTATCCGGGTGAGGCACTATTATATAAACTCATTTTA CTCCAGGCGAGTTCGTGCTTTTTCTTTGAACGAGCGAGCTTTTCTCGGCA TACCTCGCGCTGCATTCCGCGCCCTCTTGCTTCGAATATAGGTTGGAGCT GTGCCCGAGCATGTGCTGTCGAGTATAATGTACCAAGTATTACTGGCACT CATCTACCTCAAGGGTCATGGGCGCGTACACCGAGATATCAAGCCCAGCA ATCTTCTCATCAACAGCCAGGGTTTTGTGAAGGTTAGAAAAATGTCTGGC GTATGCATGTGATCAGGAGTTTCTTCTTCCGACGCCTCGAGTTGGTGAAA CGGTACATCGCTGGTTGCCCGACGCCTCGAGATATTATTTTAGTTTGTTC GTTTTATCTCCCTCCCGAATCGTTCTCCTACCACGCCAAAATCTTCAGTT GGCAGATTTTGGGATATCAGCAAGGCTGCAGAACGCAATTGCCATGTGCG GTGCCTTCGTGGGTACCTTCAAGTACATGTCACCAGAGCGGATGAAGAAC GAGAAGTACAGCTACAGCTCCGACATTTGGAGTCTAGGGCTGGTGGTTAT GGAGTGCGCAACCAGCACGTACCCTTACCAGGTAAGAGGCGAAACTTCGG TGAAAAGGGTACAGCGCGCTGCAAGCAACCCGTCTGTGTTTTCGCTGAAG AAAAGGTACATAGGCGAGGACCTCTCTTCACTTTATGTTGTCTAATTATA TTCTTCCCGAGGGTTCATATGCGTCAACATATATTCTCACTAGACTTTGC TTCCAAGTCCTCGTACGGACGTAAGAATGATAGTATATAGCTTCTTTATA GCGCAGCGTACTGAGTTGATTGTAGGACATTGGGAGTGGGAAATGAAAGA TTTCCTTGCCTTTATTTAGACAAAGATTTAGAGTTAGTGCTTGAGAACTT CGGTCGACCTCTCGGTTCACGTGATCAATCCCGGGTAGAAGCTGAATTGC TCGCGAAAATGTATGGAAACCCTTCCAACCCTTCCTCCACAGGATGAAAT GACAGCCATTGACCTCTTCCAGACGATCGTTGACGACCCCGCGCCCACTC TGGATCCAGCGCGATTTTCACCGGCCTTGTGTGGGTTTGCGGGTGGCTGC TTACTCAAGGAGCCTGTGAACCGCCTCCCAGCGAAGTCATTAATCATGTC ACCGTGGATGAACCTTTGGGGCGCGGTCAGTCTACCGTCAGCCGCCGGCA TCGTCAGGGTGTGGATCGATTCGCTTTCTGTGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig54764:1291..3675-

>mRNA_H-elongata_contig54764.12871.1 ID=mRNA_H-elongata_contig54764.12871.1|Name=mRNA_H-elongata_contig54764.12871.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1488bp|location=Sequence derived from alignment at H-elongata_contig54764:1291..3675- (Himanthalia elongata Himel1 dioecious)
GTGATCAAGACATTTGACAGAGCCAAGCGCCAGCAGCTTATCAATGAGAT
CAACGCCCTCTACGATACCAGTCACCCAACGTGATCAAGACATTTGACAG
AGCCAAGCGCCAGCAGCTTATCAATGAGATCAACGCCCTCTACGATACCA
GTCACCCAACGGTGATCGAGTTCGTGGGGGCTTTCTATCGCGAGGGCGCT
GTGACGATTGTTACAGAATATATGGATGGGGGCTCCCTCCTGAATGTCCT
CAAGCAGGGTGATCGAGTTCGTGGGGGCTTTCTATCGCGAGGGCGCTGTG
ACGATTGTTACAGAATATATGGATGGGGGCTCCCTCCTGAATGTCCTCAA
GCAGGTTGGAGCTGTGCCCGAGCATGTGCTGTCGAGTATAATGTACCAAG
TATTACTGGCACTCATCTACCTCAAGGGTCATGGGCGCGTACACCGAGAT
ATCAAGCCCAGCAATCTTCTCATCAACAGCCAGGGTTTTGTGAAGGTTGG
AGCTGTGCCCGAGCATGTGCTGTCGAGTATAATGTACCAAGTATTACTGG
CACTCATCTACCTCAAGGGTCATGGGCGCGTACACCGAGATATCAAGCCC
AGCAATCTTCTCATCAACAGCCAGGGTTTTGTGAAGTTGGCAGATTTTGG
GATATCAGCAAGGCTGCAGAACGCAATTGCCATGTGCGGTGCCTTCGTGG
GTACCTTCAAGTACATGTCACCAGAGCGGATGAAGAACGAGAAGTACAGC
TACAGCTCCGACATTTGGAGTCTAGGGCTGGTGGTTATGGAGTGCGCAAC
CAGCACGTACCCTTACCAGTTGGCAGATTTTGGGATATCAGCAAGGCTGC
AGAACGCAATTGCCATGTGCGGTGCCTTCGTGGGTACCTTCAAGTACATG
TCACCAGAGCGGATGAAGAACGAGAAGTACAGCTACAGCTCCGACATTTG
GAGTCTAGGGCTGGTGGTTATGGAGTGCGCAACCAGCACGTACCCTTACC
AGGATGAAATGACAGCCATTGACCTCTTCCAGACGATCGTTGACGACCCC
GCGCCCACTCTGGATCCAGCGCGATTTTCACCGGCCTTGTGTGGGTTTGC
GGGTGGCTGCTTACTCAAGGAGCCTGTGAACCGCCTCCCAGCGAAGTCAT
TAATCATGTCACCGTGGATGAACCTTTGGGGCGCGGTCAGTCTACCGTCA
GCCGCCGGCATCGTCAGGGTGTGGATCGATTCGCTTTCTGTGTGAGATGA
AATGACAGCCATTGACCTCTTCCAGACGATCGTTGACGACCCCGCGCCCA
CTCTGGATCCAGCGCGATTTTCACCGGCCTTGTGTGGGTTTGCGGGTGGC
TGCTTACTCAAGGAGCCTGTGAACCGCCTCCCAGCGAAGTCATTAATCAT
GTCACCGTGGATGAACCTTTGGGGCGCGGTCAGTCTACCGTCAGCCGCCG
GCATCGTCAGGGTGTGGATCGATTCGCTTTCTGTGTGA
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