prot_H-elongata_contig54731.12866.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54731.12866.1
Unique Nameprot_H-elongata_contig54731.12866.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: D7G3E6_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E6_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 8.480e-88
Identity = 135/167 (80.84%), Postives = 148/167 (88.62%), Query Frame = 0
Query:    1 MCRQLREMRAGP-GGYRTPLDRQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEYREKDALQLNLDDT 166
            MC QL+EMR G  GG R PLDRQSVVARVL +VRLYLCPFAVCHGEA GRGFVFVQTPN VLELEYLRPVNSNGRRLDRS+ILHFLSMGEFVDAV++DDFEL VIR PL+ AV++YD K E+VVL RARCGYMAVV +PLVP + VCRQL +EY+EKDALQLNLDDT
Sbjct:  134 MCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDT 300          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: A0A835Z3P7_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3P7_9STRA)

HSP 1 Score: 204 bits (518), Expect = 6.000e-63
Identity = 101/165 (61.21%), Postives = 127/165 (76.97%), Query Frame = 0
Query:    1 MCRQLREMRAGPGGYRTPLDRQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEYREKDALQLNLDD 165
            MC QL+ + AG       +D++  V+R LSKVRLYLCPFAVCHG A G GFVFVQ+PN++LEL Y+ PV S GR L RSL+LH++S GEFV+AVM+DDFEL  +R PL+ A+ A D ++EVVVL+RARCGY+ VV +PLVPE  VCR LA +Y  +DALQLNLD+
Sbjct:  118 MCAQLKALSAG-----AKVDKRDAVSRTLSKVRLYLCPFAVCHGSAIGPGFVFVQSPNSLLELNYMGPVTSAGRALQRSLVLHYMSPGEFVEAVMQDDFELMTVRTPLEAAIAAADAQREVVVLMRARCGYICVVTMPLVPEIAVCRALAGDYEGRDALQLNLDE 277          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: A0A448ZP53_9STRA (MYND-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP53_9STRA)

HSP 1 Score: 141 bits (356), Expect = 9.040e-39
Identity = 72/156 (46.15%), Postives = 107/156 (68.59%), Query Frame = 0
Query:   16 RTPLD---RQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEY---REKDALQLNLDD 165
            +TPLD   ++++   + +++R Y+CP+AV      G GF+F+Q+  T+ +L    P +  GR + RS++LHFL++GEF   V +DDFEL ++R PLK AV++YDP+KEVV+L R RCG MA+    LVP++P+C+QLA +Y       ALQLNLDD
Sbjct:  101 KTPLDGDTKKAIRNELFARIRFYVCPYAVHRTAELGSGFLFLQSDRTLRDLSPYIPKDCTGRAIVRSVLLHFLTLGEFDSEVCKDDFELAMMRTPLKEAVESYDPEKEVVLLCRFRCGNMALGRAVLVPDYPICKQLAKDYYTGNTAGALQLNLDD 256          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: A0A4D9CZP2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZP2_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.910e-36
Identity = 66/148 (44.59%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   19 LDRQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEYR--EKDALQLNLD 164
            LD++ V +++L K+RL+L P+ + H + QGRGF F+Q+  T  EL   RP+N  G  + R ++LH+L+ GEFV  V+ DDFE  V R PL+ A+ AYDP+ E V +V+ RCG++ V  +PLVP    CR+LA +Y   E+ ++ L LD
Sbjct:   92 LDKKDVASKLLCKLRLHLGPYTLAHYDRQGRGFGFLQSTATAGELFLSRPINRLGHPVQRHVLLHYLTWGEFVSVVLEDDFEYTVARTPLQAALAAYDPEGEYVAMVKLRCGFLGVFRVPLVPHAAACRRLAEDYAWAERASVTLELD 239          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: A0A1E7FEW3_9STRA (MYND-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW3_9STRA)

HSP 1 Score: 130 bits (327), Expect = 9.050e-35
Identity = 64/155 (41.29%), Postives = 102/155 (65.81%), Query Frame = 0
Query:   17 TPLD---RQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEYREKD---ALQLNLDD 165
            TP+    +Q +   +  ++R Y+CP+AV      GRGF+F+QT  T+ +L    P +  G  + RS++LHFL++GEF   V ++DFEL ++R PLK A+D+Y+ +KEVV+L R RCG M++    LVP++ +C++L  +Y  ++   A+QLNLDD
Sbjct:   72 TPISDKTKQEIRNELFQRIRFYVCPYAVLRTSELGRGFLFLQTDKTLQDLSVYIPKDCTGHTVTRSILLHFLTLGEFDSEVCKEDFELAMMRTPLKDAIDSYETEKEVVILCRFRCGNMSLGKAILVPDYGICKKLGQDYYAENPAGAVQLNLDD 226          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: W7TLT8_9STRA (Zinc finger mynd domain-containing protein 19 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLT8_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.550e-34
Identity = 66/148 (44.59%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   19 LDRQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEYR--EKDALQLNLD 164
            LD++ V +++L K+RL+L P+ + H + QGRGF F+Q+  T  EL   RP+N  G  + R ++LH+L+ GEFV  V+ DDFE  V R PL+ A+ AYDP+ E V +V+ RCG++ V  +PLVP    CR+LA +Y   E+ ++ L LD
Sbjct:  245 LDKKDVASKLLCKLRLHLGPYTLAHYDRQGRGFGFLQSTATAGELLLSRPINRLGHPVQRHVLLHYLTWGEFVSVVLEDDFEYTVARTPLQAALAAYDPEVEYVAVVKLRCGFLGVFRVPLVPHAAACRRLAEDYAWAERASVTLELD 392          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: A0A7S0UGY3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGY3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.200e-33
Identity = 62/148 (41.89%), Postives = 99/148 (66.89%), Query Frame = 0
Query:   21 RQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEYREKD---ALQLNLDD 165
            ++++   + +++R Y+CP+AV      GRGF+F+QT  T+ ++    P +  G  + RS++LHFL++GEF   V R DFEL ++R PLK AV+ YD ++EVV+L R RCG M++    LVP++ +C++L  +Y  ++   ALQLNLDD
Sbjct:   99 KETIRNELFARIRFYVCPYAVFRTAELGRGFLFLQTDRTLEDMSLYIPKDCTGHTITRSVLLHFLTLGEFDSEVCRTDFELALMRTPLKEAVETYDTEQEVVLLCRYRCGNMSLGRAALVPDYRICKKLGQDYYSENSAGALQLNLDD 246          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: A0A7S2A9V4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9V4_TRICV)

HSP 1 Score: 125 bits (314), Expect = 2.260e-32
Identity = 73/157 (46.50%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   16 RTPLDRQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRL--DRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEYRE-----KDALQLNLDD 165
            RT  D+ +    VL +VR Y  P+AV      GRGF+FVQ+  T+ EL    P   +GR L  +RS+++HFL+MGE+   V RDDFE+  +R  LK AV AYD +KE  VLVR RCG++AV    LVPE+ VC+ L  EY +     + ++QLNLDD
Sbjct:  112 RTDDDKAAARDEVLRRVRFYAFPYAVHRSSTLGRGFLFVQSGCTLAELSLPNPKRPDGRPLGRERSVLMHFLTMGEYDLEVCRDDFEMASVRGELKDAVKAYDERKEAAVLVRFRCGHVAVGLATLVPEYGVCKALGREYYQGTVGAEGSVQLNLDD 268          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: A0A7S2R2L0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2L0_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.010e-29
Identity = 65/164 (39.63%), Postives = 100/164 (60.98%), Query Frame = 0
Query:   17 TPLDRQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEY---LRPVNSNGRRL------DRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEY------REKDALQLNLDD 165
            +P D+ S    ++ ++R Y CP+AV      GRGF+F+Q  +T+ E+     L P+++            RS++LH+L++GEF   V RDDFEL  +R  LK AVD++D +K++VVL+R RCG++AV   PLVP++ +C+ L  +Y          A+QLNLDD
Sbjct:  118 SPDDQASARQDIVFRIRFYACPYAVNKSITLGRGFLFLQGTSTLAEMSLPTTLNPLHNXXXXXXXXXVKQRSVLLHYLTLGEFDSEVCRDDFELATVRDRLKQAVDSHDIEKDMVVLMRFRCGHVAVGTAPLVPDYGLCKSLGQQYYGTGEGASSGAIQLNLDD 281          
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Match: B8BQB8_THAPS (MYND-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQB8_THAPS)

HSP 1 Score: 115 bits (287), Expect = 2.650e-28
Identity = 62/152 (40.79%), Postives = 96/152 (63.16%), Query Frame = 0
Query:   20 DRQSVVARVLSKVRLYLCPFAVCHGEAQGRGFVFVQTPNTVLELEYLRPVNSNGRRL--DRSLILHFLSMGEFVDAVMRDDFELEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLAVEY----REKDALQLNLDD 165
            D+ S    +LS++R Y  P++V      GRGF+F+Q+ +++  L    P  SNG++    RS++LH+L+M EF   V  +DFEL  ++K LK AV++Y+ + EV VL+R RCG++AV   PLVP+  +C+ L  EY    +   A+QLN+DD
Sbjct:  123 DKDSARQDILSRIRFYAFPYSVHKSSIVGRGFLFLQSDSSLAVLSLPAPTMSNGKKYPKQRSVLLHWLTMKEFSSEVCMEDFELASVQKELKSAVESYNEEVEVPVLMRFRCGHVAVGIAPLVPDIKLCKMLGKEYYGSGKGSGAVQLNIDD 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54731.12866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G3E6_ECTSI8.480e-8880.84MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z3P7_9STRA6.000e-6361.21MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A448ZP53_9STRA9.040e-3946.15MYND-type domain-containing protein n=1 Tax=Pseudo... [more]
A0A4D9CZP2_9STRA3.910e-3644.59Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1E7FEW3_9STRA9.050e-3541.29MYND-type domain-containing protein (Fragment) n=1... [more]
W7TLT8_9STRA1.550e-3444.59Zinc finger mynd domain-containing protein 19 n=1 ... [more]
A0A7S0UGY3_9STRA1.200e-3341.89Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S2A9V4_TRICV2.260e-3246.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2R2L0_9STRA2.010e-2939.63Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B8BQB8_THAPS2.650e-2840.79MYND-type domain-containing protein n=1 Tax=Thalas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54731contigH-elongata_contig54731:1477..2444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54731.12866.1mRNA_H-elongata_contig54731.12866.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54731 828..3549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54731.12866.1 ID=prot_H-elongata_contig54731.12866.1|Name=mRNA_H-elongata_contig54731.12866.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
MCRQLREMRAGPGGYRTPLDRQSVVARVLSKVRLYLCPFAVCHGEAQGRG
FVFVQTPNTVLELEYLRPVNSNGRRLDRSLILHFLSMGEFVDAVMRDDFE
LEVIRKPLKVAVDAYDPKKEVVVLVRARCGYMAVVNIPLVPEFPVCRQLA
VEYREKDALQLNLDDT*
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