mRNA_H-elongata_contig54703.12863.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig54703.12863.1
Unique NamemRNA_H-elongata_contig54703.12863.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: A0A6H5JY02_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY02_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 5.810e-46
Identity = 91/167 (54.49%), Postives = 117/167 (70.06%), Query Frame = 2 
Query:    2 QERTLATSGIDSASYGNAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLT---SAFARNGIVLRAMLPGLAVTFASLMAVKVLETLHEAFYTSPYHHQDN 493
            QE+ LA++G DS++YG AV+VP   D  V+ LR+WITK   GGPAW   CDRT+PP+ER R+ L +VYE HTK+CT C GAL+ VK++L  AKT+AV S  WAVLR ARA  T+      SA   N +  RAMLP +A+TFAS+ A+K+LE L   FYT  +HHQD+
Sbjct:  415 QEKILASAGYDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGPAWDKNCDRTLPPRERNREDLFNVYENHTKSCTSCQGALKNVKKMLTTAKTAAVISFTWAVLRGARAVGTAAAAGSPSARVINTVTARAMLPAVALTFASVGAIKILEKLRGMFYTYSFHHQDS 581
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: D8LGA1_ECTSI (Rieske (2Fe-2S) region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA1_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 4.420e-40
Identity = 85/170 (50.00%), Postives = 109/170 (64.12%), Query Frame = 2 
Query:    2 QERTLATSGID---SASYGNAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLT---SAFARNGIVLRAMLPGLAVTFASLMAVKVLETLHEAFYTSPYHHQDN 493
            Q++TLA+ G D   ++SYG AVY P P D  V+ +RKWI     GGPAW   CD T+P +E KR+VL D YE HTK C+ CL AL+ + +LLA +KT+   S  W +LR ARA +T T     SA   N +  RA+LP +A+T ASL AVKVLE L   +YT  +HHQDN
Sbjct:  306 QDKTLASVGHDGNSTSSYGKAVYTPAPADRAVMAVRKWIATHGSGGPAWDKDCDPTLPEREHKREVLFDYYEGHTKTCSTCLRALKNINKLLAASKTATAVSCTWGLLRGARAVSTPTAVGSRSASVVNAVTARAILPAVALTLASLGAVKVLEKLRGLYYTYSFHHQDN 475
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: A0A6H5KG92_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG92_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 7.470e-38
Identity = 81/167 (48.50%), Postives = 106/167 (63.47%), Query Frame = 2 
Query:    2 QERTLATSGIDSASYGNAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLTSAFA--RNGIVLRAMLPGLAVTFASLMAVKVLETLHEAFYTSPYHHQDND 496
            QE+ +A+SG   A + + +Y PT  D G+  LRKWI KF  GGP W  G D ++P +    DV+ D+YEQHTK+CT CLGAL+RV+Q +  AK S VASL WAVLRAA A +TS L S      N +  +AMLPG+ +  ASL   K+L +L   FY   Y HQ++D
Sbjct:  399 QEKIMASSGHTGAKWSDGIYTPTTSDKGIHTLRKWIKKFGSGGPPWPKGYDTSLPSRHDNPDVMWDIYEQHTKHCTACLGALKRVEQCITAAKVSTVASLTWAVLRAASAISTSILASPGTPPSNFVAAKAMLPGVLLMLASLKTTKMLGSLRRMFYVYKYVHQEHD 565
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: Q3MEA6_TRIV2 (Rieske (2Fe-2S) region n=6 Tax=Nostocaceae TaxID=1162 RepID=Q3MEA6_TRIV2)

HSP 1 Score: 86.3 bits (212), Expect = 3.880e-14
Identity = 58/167 (34.73%), Postives = 85/167 (50.90%), Query Frame = 2 
Query:    2 QERTLATSGIDSASYGNAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLTSAFARNGIVLRAMLPGLAVTFASLMAVK--VLETLHEAFYTSPYHHQDND 496
            QE+ +A     +  + NAVY P P D  V+ LR+W+   AGGG  W +G    +PP E+ +  L DV+  HT++CTVC  AL+ + +L  +A  SA   L  AV+  AR   T  + +A   +   L  +   LA+  A L+AV    L+     FY   + H  ND
Sbjct:  338 QEKIIAQK--KNGKWLNAVYTPNPQDKMVITLRQWLKNRAGGGIPWAEGYSSDIPPAEKDKQKLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAICLFLAVILDAR---TVAMQAALGASIFTLPPVGFWLALGGAILLAVVGYQLKRFSRLFYVYEFEHARND 499
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: B7JYI1_RIPO1 (Rieske (2Fe-2S) domain protein n=1 Tax=Rippkaea orientalis (strain PCC 8801) TaxID=41431 RepID=B7JYI1_RIPO1)

HSP 1 Score: 82.4 bits (202), Expect = 6.580e-13
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 2 
Query:    2 QERTLATSGIDSASYGNAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLTSAFARNGIVLRAMLPGLAVTFASLMAVKVL-------ETLHEAFYTSPYHHQDND 496
            QE+ +A  G  + ++ +AVY P P D  V+ LRKW+ K AGGG  W +G +  +PP +R +  L DV+  HT++C VC  AL+ + +    A   A   L +AV+  AR    +  + +    G  L  M+P     + +++   +L       + L   FY   + H  ND
Sbjct:  330 QEKIIARQG--TQNWLSAVYTPNPQDKMVITLRKWLEKRAGGGIPWAEGTNPELPPPQRDKQQLFDVWSTHTQHCRVCQDALKNINRTRLFAYIGAGVCLLFAVILDARMVAMTLGSQSLKEVGSWL--MIPPSGAFWGAIVGAIILALGGYYLKKLSRLFYVYEFGHSQND 497
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: B0CAB5_ACAM1 (Rieske 2Fe-2S domain protein, ISS putative n=5 Tax=Acaryochloris TaxID=155977 RepID=B0CAB5_ACAM1)

HSP 1 Score: 81.3 bits (199), Expect = 1.590e-12
Identity = 55/153 (35.95%), Postives = 76/153 (49.67%), Query Frame = 2 
Query:   56 VYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLTSAFARNGIVLRAMLPGL------AVTFASLMAVKVLETLHEAFYTSPYHHQDND 496
            VY P P D  V+ LR+WI   AGGG  W   CD  +PP +R ++ L D++  HTK+C VC GAL R++QL  V   SAV      V+  AR+     +T   A   ++L A  P        +V FA+     +L+     FY   + H  ND
Sbjct:  361 VYTPNPQDKMVIALRQWIKTRAGGGIPWQ--CDPQLPPPQRDKEQLFDIWNTHTKDCQVCRGALNRIQQLKVVMWISAVVCFGLGVMLDARSQALYAITHPDA--SVLLMAPPPEFWELVLCSVVFAT--GGYLLQRFSRMFYVYTFDHAHND 507
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: A0A218QH02_9CYAN (Rieske (2Fe-2S) region n=1 Tax=Tolypothrix sp. NIES-4075 TaxID=2005459 RepID=A0A218QH02_9CYAN)

HSP 1 Score: 80.1 bits (196), Expect = 3.570e-12
Identity = 50/149 (33.56%), Postives = 69/149 (46.31%), Query Frame = 2 
Query:   50 NAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLTSAFARNGIVLRAMLPGLAVTFASLMAVKVLETLHEAFYTSPYHHQDND 496
            NAVY P P D   +  R+W+ K AGGG  W   CD  +PP ER +  L DV+  HT++C+VC  AL  + +L  +A  +AV      V+  AR    S + S F          + G   T    +A   L+     FY   + H  ND
Sbjct:  351 NAVYTPNPQDKMTIAFRQWLEKRAGGGIPWDSSCDPNLPPAERDKQKLFDVWTTHTQDCSVCQNALTNINRLSILAYIAAVVCFGLGVIVDARTV-ASAVQSTFVTPPASFWWAIGG---TILFAIAGYQLKRFSRLFYVYEFEHSHND 495
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: A0A2W1JL98_9CYAN (3-ketosteroid-9-alpha-monooxygenase, oxygenase component n=1 Tax=Acaryochloris thomasi RCC1774 TaxID=1764569 RepID=A0A2W1JL98_9CYAN)

HSP 1 Score: 79.0 bits (193), Expect = 7.880e-12
Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 2 
Query:    2 QERTLATSGIDSASYGNAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAARAPNTSTLTSAFARNGIVLRAMLPGLAVTFASLMAVK--VLETLHEAFYTSPYHHQDND 496
            QE+ +A     S  + + VY P P D  ++  RKW+   AGGG  W   CD  +PP ER + VL DV+  HTK+C VC  AL+ ++++  VA  +A+      +L  ARA   ++        G         +A+  + L+A    +L+     FY   + H  ND
Sbjct:  325 QEKIIARR---SEEWLDQVYTPNPQDKAIIAFRKWLQYKAGGGIPWA--CDPELPPAERDKQVLFDVWSTHTKDCQVCRQALKNIQRVTVVAYVAAIICFGVGILVDARAIRATSQLWVMPSVGF-------WVAIASSILLAGGGYLLQKFSRLFYVYEFEHAHND 479
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: A0A6P1AII9_9CYAN (Rieske 2Fe-2S domain-containing protein n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AII9_9CYAN)

HSP 1 Score: 75.5 bits (184), Expect = 1.070e-10
Identity = 48/154 (31.17%), Postives = 72/154 (46.75%), Query Frame = 2 
Query:   56 VYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWAVLRAAR-------APNTSTLTSAFARNGIVLRAMLPGLAVTFASLMAVKVLETLHEAFYTSPYHHQDND 496
            +Y+P P D  VV  RKW+   AGG   W  GC+  +PP ER +  L D++  HT++C VC  AL+ + +L  +   +++  L   +L  AR       A    T +SA       L     G A+ FA  +   +L+     FY   + H  ND
Sbjct:  348 LYLPNPQDKMVVTFRKWLEYRAGGEIPWASGCNPELPPPERDKQKLFDLWTTHTQHCLVCQNALKNINRLTVLVYLASIVCLCLGILVDARSVAVQILAGQMRTFSSALVVPPSGLFWWAVGSAIFFA--LVGYMLKKFSRFFYVYEFEHSQND 499
[Close]
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Match: A0A7S0AJ00_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AJ00_9DINO)

HSP 1 Score: 72.4 bits (176), Expect = 1.030e-9
Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 2 
Query:    2 QERTLATSGIDSASYGNAVYVPTPGDTGVVNLRKWITKFAGGGPAWVDGCDRTMPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQL 265
            Q RTLA  G+   ++   +YVPT  D  VV  R+W+ +FAGGG AW        PP    R  L++ Y  HT++C  C GAL   + +
Sbjct:  376 QGRTLAPGGVQVPNWRERIYVPTSADAAVVQYRRWLDEFAGGGVAWARASQPEPPPT---RAALIERYYSHTEHCASCAGALASARSM 460
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54703.12863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JY02_9PHAE5.810e-4654.49Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
D8LGA1_ECTSI4.420e-4050.00Rieske (2Fe-2S) region n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KG92_9PHAE7.470e-3848.50Rieske domain-containing protein n=2 Tax=Ectocarpu... [more]
Q3MEA6_TRIV23.880e-1434.73Rieske (2Fe-2S) region n=6 Tax=Nostocaceae TaxID=1... [more]
B7JYI1_RIPO16.580e-1330.81Rieske (2Fe-2S) domain protein n=1 Tax=Rippkaea or... [more]
B0CAB5_ACAM11.590e-1235.95Rieske 2Fe-2S domain protein, ISS putative n=5 Tax... [more]
A0A218QH02_9CYAN3.570e-1233.56Rieske (2Fe-2S) region n=1 Tax=Tolypothrix sp. NIE... [more]
A0A2W1JL98_9CYAN7.880e-1231.143-ketosteroid-9-alpha-monooxygenase, oxygenase com... [more]
A0A6P1AII9_9CYAN1.070e-1031.17Rieske 2Fe-2S domain-containing protein n=1 Tax=Ka... [more]
A0A7S0AJ00_9DINO1.030e-938.64Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54703contigH-elongata_contig54703:2..3568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.1
Seed ortholog evalue5.6e-21
Seed eggNOG ortholog2880.D7FVR5
KEGG rclassRC03394
KEGG koko:K13071
KEGG ReactionR08921
KEGG Pathwayko00860,ko01110,map00860,map01110
EggNOG free text desc.pheophorbide a oxygenase activity
EggNOG OGs2QQ8U@2759,COG4638@1
EC1.14.15.17
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size1787
Cds size339
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930891.7694855-UTR-H-elongata_contig54703:1..12891622930891.7694855-UTR-H-elongata_contig54703:1..1289Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54703 2..1289 -
1691679613.9261265-UTR-H-elongata_contig54703:1..12891691679613.9261265-UTR-H-elongata_contig54703:1..1289Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54703 2..1289 -
1622930891.8355212-UTR-H-elongata_contig54703:3196..32601622930891.8355212-UTR-H-elongata_contig54703:3196..3260Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54703 3197..3260 -
1691679613.9911714-UTR-H-elongata_contig54703:3196..32601691679613.9911714-UTR-H-elongata_contig54703:3196..3260Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54703 3197..3260 -
1622930891.847614-UTR-H-elongata_contig54703:3472..35681622930891.847614-UTR-H-elongata_contig54703:3472..3568Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54703 3473..3568 -
1691679614.0064578-UTR-H-elongata_contig54703:3472..35681691679614.0064578-UTR-H-elongata_contig54703:3472..3568Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54703 3473..3568 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930891.7833674-CDS-H-elongata_contig54703:1289..13521622930891.7833674-CDS-H-elongata_contig54703:1289..1352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 1290..1352 -
1691679613.9407942-CDS-H-elongata_contig54703:1289..13521691679613.9407942-CDS-H-elongata_contig54703:1289..1352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 1290..1352 -
1622930891.801344-CDS-H-elongata_contig54703:1899..20281622930891.801344-CDS-H-elongata_contig54703:1899..2028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 1900..2028 -
1691679613.9537852-CDS-H-elongata_contig54703:1899..20281691679613.9537852-CDS-H-elongata_contig54703:1899..2028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 1900..2028 -
1622930891.8122315-CDS-H-elongata_contig54703:2255..23541622930891.8122315-CDS-H-elongata_contig54703:2255..2354Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 2256..2354 -
1691679613.9703925-CDS-H-elongata_contig54703:2255..23541691679613.9703925-CDS-H-elongata_contig54703:2255..2354Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 2256..2354 -
1622930891.8231075-CDS-H-elongata_contig54703:3148..31961622930891.8231075-CDS-H-elongata_contig54703:3148..3196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 3149..3196 -
1691679613.9807394-CDS-H-elongata_contig54703:3148..31961691679613.9807394-CDS-H-elongata_contig54703:3148..3196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54703 3149..3196 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54703.12863.1prot_H-elongata_contig54703.12863.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig54703 1290..3196 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig54703.12863.1

>prot_H-elongata_contig54703.12863.1 ID=prot_H-elongata_contig54703.12863.1|Name=mRNA_H-elongata_contig54703.12863.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
MPPKERKRDVLLDVYEQHTKNCTVCLGALRRVKQLLAVAKTSAVASLAWA
VLRAARAPNTSTLTSAFARNGIVLRAMLPGLAVTFASLMAVKVLETLHEA
FYTSPYHHQDND*
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mRNA from alignment at H-elongata_contig54703:2..3568-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig54703.12863.1 ID=mRNA_H-elongata_contig54703.12863.1|Name=mRNA_H-elongata_contig54703.12863.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3567bp|location=Sequence derived from alignment at H-elongata_contig54703:2..3568- (Himanthalia elongata Himel1 dioecious)
GCAGGAAAGAACGCTGGCGACTTCAGGAATCGATAGCGCCAGCTACGGCA
ACGCTGTGTACGTGCCGACACCCGGAGACACGGGGGTGGTAAATCTGTGA
GTAGATGGAGGCACGTCATGCCCCCTAGCGTGATTCTTGCCCCCCACATG
CGGTTCGTGGGCAGGTTGGATACTGTTGTCAAAGTTGAGGCCGCTTTAAT
GAATGCACCGGTGGATCGTGGGCCACATTTTTCTGACCCAGCTATTGATT
AGGGGGGCTATTAACTTGTAAAATCTGAAAGAAAGCCTTTCCGCAACGGG
CATTCCAGGAGGAAGTGGATAACAAAGTTCGCCGGCGGTGGTCCTGCTTG
GGTTGACGGCTGCGACCGGACCATGCCTCCCAAGGAACGGAAGCGTGATG
TCCTCCTTGATGTCTACGAGGTAAAGCGGCGACGCGTCGCGATGAGCTCG
GTAGCGTTACAAGTCCTCAAATACAACAACATTATTGATGTGATGTATCA
GGATTAGATTTTCTTTTCAAGTTAATTCCCCATCTTTCCTTCTGTTTTCG
TTACGTATTCGTCGCATATTACGCGTTGGACGACGAGATTCGCCGACCAC
AATGTATGATGCCATGTTTAAAAAACAAAATGTGTTTCAGGTTGAAGAGT
TACATTTCGCCACCACGAGCGACTGTCACTGATACAAGGTATAATGCGCA
TGAAATATATGTGGTTCTCAATACTAATATGTGTACGCTGTATTGCGATC
ATGCCACCGGGGTGGACGGTGCCTCTTCTTCCTATGTCTCTCAGGGTTGA
CGCGCCGCATCCGTGATTTGGTGTAGTCCCGCAACAGAAACCGTGCAAAA
GTTTTCGCATTTGGCGGTAGTACATGTAGTAACTAAGTCAGACTAAAAGC
GTCAGAATTGGCCCCCCTATCGCCCAGTCGTTCGGTTCTATCTCAACGAC
CGCCTTGCAGCTTTGTTGATTTCCCGTGAATATAACTATTGCCTTTGAAG
CGGCAAGTGTGACGCGATGCAAACGTGGAACCGTGAACCACCATTTTCCT
TTGTTCCGTGACGTTGAGTCCTAGTTTAGCGTGTGTCAACAATCTTTCTT
CTCTAATTATAGTCCTTTCCGGAGAATCAAAGCTGGTTCGTGTAAGCAAC
CTCGCTGAGGGTGTAGTTTTCTTAAATTCGCGGGTTTTTGACTCCCATGA
ATGGGCCCGACCAGCAACACACAAAGAACTGCACCGTGTGTCTGGGGGCT
CTGAGGAGGGTCAAGCAACTACTAGCGGTGGCAAAAACCTCCGCGGTGGC
ATCTCTCGCCTGGGTGAGCAGATATAACGCCGCAACATCTCTCGAAATCG
TCGATGCTGCCATGATCTACCATACTTCGTACTTGGTGCCATTTTTCACC
ACCCGTTCGTTCACTTTTGCATTTCTCGTCTTCTGCGCGTTGTTAGCTTT
CAGAGGGTACCGCTTGTAGGCTTCCTGTTTTTGATCAATCGAATACGATA
GCCTAGGTCTTATGACGTGTTTTCGTTTCTTCCGTCGTAGGCGGTTTTGA
GGGCGGCGCGTGCACCCAATACGTCCACCTTGACCTCCGCGTTTGCGCGG
AACGGCATCGTGTTGAGGGCAATGCTCCCCGGTCTCGCGGTGACGTTCGC
GAGCCTGATGGCTGTTAAGGTGTGAAAGCTGGTTATTGTAGAGGCGCCGC
AAAGGAGTGTTGATGTTGATGAGGTACTGTGGGGTACACGACATGGTACG
GATACAAAATATCCTCTCGATATCTTGTGTACCACACGAAGTTTCGTAAC
AGGATGTAACCGGATGGGATAGGATGGGTCATCCTTCTTGATCATTCCGT
CTCCGTTTCCAAACTGTTAATAACATCCTTCGCCTTATCCGGCGATTGCC
GGTAGTGTAATCAGAGGGGGCTCAAAAAGGTCCATGCATGCGTTTGCCGA
CTGTTCATCCGGTGACCTTCGATCCATGGTCAACCGTCGCCTGGCTGACT
CCCTTTGTACTTCACTGCTCACATCTTGATCGCTAGAAATACGAAGCATG
CTACTACAAACATACCCACTTTTGCTTATATCAGCCCAATCGGGGCGTTA
CATTCTAAACATAACACGTTCAAGATGGAAGGCGCGTGGTCGTTGGTCTG
CTGATTGCTAGCCGCCTTTAATGTTGTCGATTAATTTCCTTAAATGATAT
GTTTTACATTCGCCAGGTATTGGAAACTCTGCACGAGGCCTTCTACACCA
GCCCCTACCATCACCAAGACAACGACTAAAAATCTCAGCTTCCGACATTG
AGGGTCTAATTGGCAGTAATCTACTGGGTGCATTTCGATACCTCAATCGC
TTCCGGGCAAAATAAACTGGGCGCGCTCGACGATCTTGGAGACGCATTCT
AGGTTATCGTGGGGCAGTGCGTGGGCGCGCGTAGCTACGAGCTCGAAGTG
TTGTGTTTCCCTCCTGTAGTTCCTCGTAGTCGAATCCCTACTCGGTCTTG
AGGTTGTGCTTGTCTTGGTCCGTGCATTTATAAAAGGGTGTACCTCAGTG
CGCCACGGTACCCCGCGCGTTAGCTTGTGGATGGTAGCCATTACGCATAT
GGGAAAAAATGTGTTTCTTTGTGATACGTTTGTTTGTAGAAGTAATGGTG
ATGTACATATCCGGGCTTATGGATAAGAATATGTCGATGTGTACACAACC
CTTGTAGAATACGTTGGTCACTTTGAAGTAGTACGTATTTTGAAACGTGA
ACGTTTCAGTCTTCTGCGACGTTGCACAAGCTTGTCGAGGTGGTAGAAGC
AGTGCGCCTTGATAGGATTTTGCTGAGGCTAAACGTTCTACTGGCTCTGG
CGGTCAAGACAGTGTGATCCGTACGAGCGCACTGCGCGTAGACTGGTTGA
TAGATTCTGCAACCTTCTTGCCAGCGTCTTCATTGTTTATCAGCTACCGA
GGATGGAAATTGTTTATTTTTGCCTATCCTCAGCGTAAAGGTGAGGAGTG
AAGTTGCCACGTCCGAGCAATAAGTTCGATACTTAATATTTCCTTGCTTG
GAACGTTTCCTAGTGCTCTCTCGTAGTCCTCGTAATGAGACCTTTTGTGG
TACGAAGGTAGATTTTTGGCTACCAGGCCGCGCTGATAAATTGTTGCATA
TATGTAAAACGACAGGAATTCGAAAATCGTTATCAGTGTTGAGAATTTCA
CCGCCTTTGGTTGCTGTTTGTAAAGTGGTAGTGTTATTCGCGCCGTATCG
ACTCCTTAAAATGTATATGATGTTTTATTTGCAACGCGCTCGGTTTCTGA
AAAGCTCTTGAAATAGATGCGCGGTAAAATATATCGGTAAATTGTACAGT
AACTTGGGTAGGGCAGGCCCAAAGGGTGATTCAGTAAGCATCGTGCGCTG
TGTACCCTATGATTGATTCATTAACTGATGGAACTGTTTCTATATTCGTC
AGGTATTATTTTCTGCCCTGGCACAACATGACCTTCTCGAAAGCAGTAAA
AACGCAGCGTTCGGCGCAATTACCAGGCAAATCCACGGCGTCAGTCAGTT
ATTGGTCTGAACACAGC
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Coding sequence (CDS) from alignment at H-elongata_contig54703:2..3568-

>mRNA_H-elongata_contig54703.12863.1 ID=mRNA_H-elongata_contig54703.12863.1|Name=mRNA_H-elongata_contig54703.12863.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=678bp|location=Sequence derived from alignment at H-elongata_contig54703:2..3568- (Himanthalia elongata Himel1 dioecious)
ATGCCTCCCAAGGAACGGAAGCGTGATGTCCTCCTTGATGTCTACGAGAT
GCCTCCCAAGGAACGGAAGCGTGATGTCCTCCTTGATGTCTACGAGCAAC
ACACAAAGAACTGCACCGTGTGTCTGGGGGCTCTGAGGAGGGTCAAGCAA
CTACTAGCGGTGGCAAAAACCTCCGCGGTGGCATCTCTCGCCTGGCAACA
CACAAAGAACTGCACCGTGTGTCTGGGGGCTCTGAGGAGGGTCAAGCAAC
TACTAGCGGTGGCAAAAACCTCCGCGGTGGCATCTCTCGCCTGGGCGGTT
TTGAGGGCGGCGCGTGCACCCAATACGTCCACCTTGACCTCCGCGTTTGC
GCGGAACGGCATCGTGTTGAGGGCAATGCTCCCCGGTCTCGCGGTGACGT
TCGCGAGCCTGATGGCTGTTAAGGCGGTTTTGAGGGCGGCGCGTGCACCC
AATACGTCCACCTTGACCTCCGCGTTTGCGCGGAACGGCATCGTGTTGAG
GGCAATGCTCCCCGGTCTCGCGGTGACGTTCGCGAGCCTGATGGCTGTTA
AGGTATTGGAAACTCTGCACGAGGCCTTCTACACCAGCCCCTACCATCAC
CAAGACAACGACTAAGTATTGGAAACTCTGCACGAGGCCTTCTACACCAG
CCCCTACCATCACCAAGACAACGACTAA
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